BAC Information

Click to search

BAC

Clone NameB6Ng01-267H15
Chromosome3 (Build37)
Map Location 77,292,078 - 77,293,255
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H15.bB6Ng01-267H15.g
ACCGA070586GA070587
length1,2151,176
definitionB6Ng01-267H15.b B6Ng01-267H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatattttatatattagccctctctttgatgtgaagttgg
gaaaaatattcttccattgtttgccctcattatggtgtccattagcaaag
cctttcagattcatgaggtcccatttagtaattattgactttagtgccta
tgctatctgtgttatgtttagaaaatttatttcaagactcttcccttttt
tcagttctatcaggttcagtgtgtctggttttatgttgaggtctttgatc
catttggacttgtgttttgtacacagtggtaaatatttgcattctacatg
ccgatagccagcattttgaaggtgcttttgttcccacggtgcacatacca
tcacatcaaggctagaaggggcaacactgtaggagaaaaaaagtctcaca
agtaggaaaagagttagggacagtctctacccccacttttagtattccaa
cataaactcaaagccataatgtatatgaagaggaactaagtagactatgg
ccagtccagtcttccttacagggtgcctgatctctgtaaaaccccttgat
tcctagtgagatgattttataagtcctgttcctatatgttcttatggtgt
ccctgactcctctggttcatcctatcctttcttcctttcgtccacaggac
tcccccgacacttctttaatatttggctgtgggactcttcatctgctcct
accactccctgaaaaaaactgtctctggtctctttgatggtgattctgct
aggctcaggtctcagaatactctgccagtaggaaaaattacaggtttaag
gctttgtgttttggttggtgtccaaatcatttcacttaaagtcttgcctg
gttatagaagatggccaattcaggctccttatctcccattacgaactctg
gtgactcttttagatttaatagagtttccattgcattaggtttcaacatt
acccccaaaatttaccccaattccagtcatttctccagtactttctccat
ccacaccacctgatccctcctgttctcctggaaaacttatttgattcatt
cttccagggagatgctacctccccactaaaacccttcttctaccttagtg
tcttctgggatctggtggactgcacatgaattgttctttgacttttgcag
cttatatcaacttatatttgagatccatcaccacggttaaagggtgaaat
ttttttttctagagc

gaattcagtggcagtatatccaagcagaggaattcagtcagaagcagcct
atttaaatcagtcagcttagaagattagattttatagagactagaaactt
acaggcctaggcctagggttagttagaccaaagaaggaaacacattgggc
ttatgccaagccatgtattctcatagcttgggtataaagatcatctcatc
ccatcatctgaagaaatacaagcaacatttacattggtttcttttttaaa
aaaataaactttgtaatgacaaaatacataagtcttacaaattaacttta
tggccaatattaatgacctgaattcttgcctaaaataattcattcactaa
gatgtatcaagaaaatcatactctattagagtacatgtgttatttacata
gtgaaaaaaggataaccatgcatttttcaatttatacttataaagcaaat
aattattaatataataataaaatctaagaataatgtcaaaatggcaattc
atcattattgattatatataataatagcacttataattgatggtatgtaa
tttttattttattgtaatttaaaaatgtataacactttgattagagccta
agtgtgcagtgactagtacttataaacttctttgttgcatctattcaaac
accatcatgtatttacatctgttgatgactgttggaatttattcaattat
tatcttctatagatagcactgcaaggaaacttttatgtgtttcttatcta
atgtgcaaataaaattgtgagttcatgccttgaattttcttgagtgaata
tattatttctacctatccttgaaacaaacaagcaaattaacaaaaacaaa
caaacaatcaaacatgaggttgtatttccctatttagcttgttactgaaa
tgtgttaactaagcctttggtcctggcgtcatctcaaaacttttgttctg
aaatgttcctaatattacctgtgtgaatttgtaaccatgcatcagatttt
ctagaagaaacagcaaaacattatagctttggttgcatttactttctgat
agcaatacgagaccacattattgcctttttttgttattcagtctcactgt
ggatttattatggagttaggtacagaaaaatacgtcacacctttgcaagc
tctgttgagaataacatcttttttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77292078_77293255
seq2: B6Ng01-267H15.g_69_1244 (reverse)

seq1  TAAAAAA--ATATTA-TCTCAACAGAGTTTGCAAA-GTGTGAAGTTATTT  46
      |||||||  || ||| ||||||||||| ||||||| |||||| |   | |
seq2  TAAAAAAAGATGTTATTCTCAACAGAGCTTGCAAAGGTGTGACG---TAT  47

seq1  TTTTCTGTACTTAACT-CATAATAAATCAACAGTTGAGACTGAATAACAA  95
      |||||||||| ||||| ||||||||||| |||| ||||||||||||||||
seq2  TTTTCTGTACCTAACTCCATAATAAATCCACAG-TGAGACTGAATAACAA  96

seq1  AAAAAGGCAATAATTGTGGTCTTCGTATGCCTATCAGAAAGTAAATGCAA  145
      ||||||||||||| ||||||| ||||||  ||||||||||||||||||||
seq2  AAAAAGGCAATAA-TGTGGTC-TCGTATTGCTATCAGAAAGTAAATGCAA  144

seq1  CCAAAGCTAT-ATGTTTTGCTGTTTCTTCTAGAAAATCTGATGCATGGTT  194
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCTATAATGTTTTGCTGTTTCTTCTAGAAAATCTGATGCATGGTT  194

seq1  ACAAATTCACAACAGGTAATTATAGGAACATTTCAGAACAAAAGTTTTGA  244
      |||||||||| |||||||||  ||||||||||||||||||||||||||||
seq2  ACAAATTCAC-ACAGGTAATATTAGGAACATTTCAGAACAAAAGTTTTGA  243

seq1  GATGACGCCAGGACCAAAGGCTTAGTTAACACATTTCAGTAACAAGCTAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACGCCAGGACCAAAGGCTTAGTTAACACATTTCAGTAACAAGCTAA  293

seq1  ATAGGGAAATACAACCTCATGTTTTGATTGTTTGTTTGTTTTTGTTAATT  344
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATAGGGAAATACAACCTCATG-TTTGATTGTTTGTTTGTTTTTGTTAATT  342

seq1  TGCTTGTTTGTTTCAAGGATAGGTAGAAATAATATATTCACTCAAGAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTTGTTTCAAGGATAGGTAGAAATAATATATTCACTCAAGAAAA  392

seq1  TTCAAGGCATGAACTCACAATTTTATTTGCACATTAGATAAGAAACACAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCATGAACTCACAATTTTATTTGCACATTAGATAAGAAACACAT  442

seq1  AAAAGTTTCCTTGCAGTGCTATCTATAGAAGATAATAATTGAATAAATTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTCCTTGCAGTGCTATCTATAGAAGATAATAATTGAATAAATTC  492

seq1  CAACAGTCATCAACAGATGTAAATACATGATGGTGTTTGAATAGATGCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTCATCAACAGATGTAAATACATGATGGTGTTTGAATAGATGCAA  542

seq1  CAAAGAAGTTTATAAGTACTAGTCACTGCACACTTAGGCTCTAATCAAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGTTTATAAGTACTAGTCACTGCACACTTAGGCTCTAATCAAAG  592

seq1  TGTTATACATTTTTAAATTACAATAAAATAAAAATTACATACCATCAATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATACATTTTTAAATTACAATAAAATAAAAATTACATACCATCAATT  642

seq1  ATAAGTGCTATTATTATATATAATCAATAATGATGAATTGCCATTTTGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGCTATTATTATATATAATCAATAATGATGAATTGCCATTTTGAC  692

seq1  ATTATTCTTAGATTTTATTATTATATTAATAATTATTTGCTTTATAAGTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTAGATTTTATTATTATATTAATAATTATTTGCTTTATAAGTA  742

seq1  TAAATTGAAAAATGCATGGTTATCCTTTTTTCACTATGTAAATAACACAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAAAATGCATGGTTATCCTTTTTTCACTATGTAAATAACACAT  792

seq1  GTACTCTAATAGAGTATGATTTTCTTGATACATCTTAGTGAATGAATTAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTAATAGAGTATGATTTTCTTGATACATCTTAGTGAATGAATTAT  842

seq1  TTTAGGCAAGAATTCAGGTCATTAATATTGGCCATAAAGTTAATTTGTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCAAGAATTCAGGTCATTAATATTGGCCATAAAGTTAATTTGTAA  892

seq1  GACTTATGTATTTTGTCATTACAAAGTTTATTTTTTTAAAAAAGAAACCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGTATTTTGTCATTACAAAGTTTATTTTTTTAAAAAAGAAACCA  942

seq1  ATGTAAATGTTGCTTGTATTTCTTCAGATGATGGGATGAGATGATCTTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGTTGCTTGTATTTCTTCAGATGATGGGATGAGATGATCTTTA  992

seq1  TACCCAAGCTATGAGAATACATGGCTTGGCATAAGCCCAATGTGTTTCCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGCTATGAGAATACATGGCTTGGCATAAGCCCAATGTGTTTCCT  1042

seq1  TCTTTGGTCTAACTAACCCTAGGCCTAGGCCTGTAAGTTTCTAGTCTCTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTCTAACTAACCCTAGGCCTAGGCCTGTAAGTTTCTAGTCTCTA  1092

seq1  TAAAATCTAATCTTCTAAGCTGACTGATTTAAATAGGCTGCTTCTGACTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTAATCTTCTAAGCTGACTGATTTAAATAGGCTGCTTCTGACTG  1142

seq1  AATTCCTCTGCTTGGATATACTGCCACTGAATTC  1178
      ||||||||||||||||||||||||||||||||||
seq2  AATTCCTCTGCTTGGATATACTGCCACTGAATTC  1176


| Home | SequenceCutter | Blast | Download |