BAC Information

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BAC

Clone NameB6Ng01-267H16
Chromosome3 (Build37)
Map Location 77,292,298 - 77,293,229
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H16.g
ACCGA070588
length961
definitionB6Ng01-267H16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggcaggatatccgagcggaggaattcagccagaagcagcgt
atttaaatcagtcaccttagaagattgtattttatagagactctaaactt
ccacgcctaggcctagggttagttagaccaaagaaggaaacgcgttgggc
ttatgccaagccgaggattctcataacttgggtataaagatcgtctcagc
ccctcctctgaagaaataccacccacatttacattggtttcttttttaaa
aaaataaactttgtaatgaccaaatacataagtcttaccaattaacttta
tggcccatattaatgacctgaattcttgcctagaataattcattcactaa
gatgtatcaagaaaatcatactctattagagtacatgtgttatttacata
gtgaaaaaaggataaccatgcctttttcaatttatacttataaagcaaat
aattattaatataataataaaatctgagaataatgtcaaaatggcaattc
gtcagtattgattatatataataatagcacttataattgatggtatgtaa
tttttattttattgtcatttaaagatgtatgacactttgattagagcctc
agagtgccctgactagtacttataaacttctttgttgcatctattcggac
accatcatgtatttacctctgttgatgactgttgggagttattcaattat
tatcttctatagatagcactgaaaggaaacttttatgtgtatcgtatctc
atgtgcaaataagattgtgagttcaagccttgaatttacttgcgtgaata
tcttacttctacgtatccgtgaaacaaacaagcaaattaacaaaaacaaa
taaacaatcacaacatgacgttgcatttacctatttagcatggatactgg
aaatgtgtaaactaacccttatgggcatcgcgtcatctcaaagcttttat
tctgaaatgtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77292298_77293229
seq2: B6Ng01-267H16.g_90_1024 (reverse)

seq1  AACATTTCAGAACAAAAGTTTTGAGATGACGCCAGGACCA-AAGGCTTAG  49
      |||||||||||| ||||| ||||||||||||| | | ||| |||| ||||
seq2  AACATTTCAGAATAAAAGCTTTGAGATGACGCGATGCCCATAAGGGTTAG  50

seq1  TTAACACATTT-CAGTA-ACAAGCTAAATAGGGAAATACAACCTCATGTT  97
      || |||||||| |||||  || |||||||||| |||| |||| |||||||
seq2  TTTACACATTTCCAGTATCCATGCTAAATAGGTAAATGCAACGTCATGTT  100

seq1  TTGATTGTTTGTTTGTTTTTGTTAATTTGCTTGTTTGTTTCAAGGATAGG  147
       ||||||||| ||||||||||||||||||||||||||||||| ||||| |
seq2  GTGATTGTTTATTTGTTTTTGTTAATTTGCTTGTTTGTTTCACGGATACG  150

seq1  TAGAAATAATATATTCACTCAAGAAAATTCAAGGCATGAACTCACAATTT  197
      ||||| ||| |||||||| |||| ||||||||||| |||||||||||| |
seq2  TAGAAGTAAGATATTCACGCAAGTAAATTCAAGGCTTGAACTCACAATCT  200

seq1  TATTTGCACATTAGATAAGAAACACATAAAAGTTTCCTTGCAGTGCTATC  247
      ||||||||||| ||||| || |||||||||||||||||| ||||||||||
seq2  TATTTGCACATGAGATACGATACACATAAAAGTTTCCTTTCAGTGCTATC  250

seq1  TATAGAAGATAATAATTGAATAAATTCCAACAGTCATCAACAGATGTAAA  297
      ||||||||||||||||||||||| | |||||||||||||||||| |||||
seq2  TATAGAAGATAATAATTGAATAACTCCCAACAGTCATCAACAGAGGTAAA  300

seq1  TACATGATGGTGTTTGAATAGATGCAACAAAGAAGTTTATAAGTACTAGT  347
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  TACATGATGGTGTCCGAATAGATGCAACAAAGAAGTTTATAAGTACTAGT  350

seq1  CACTGCACACTTAGGCTCTAATCAAAGTGTTATACATTTTTAAATTACAA  397
      ||  |||| || |||||||||||||||||| |||||| ||||||| ||||
seq2  CAGGGCACTCTGAGGCTCTAATCAAAGTGTCATACATCTTTAAATGACAA  400

seq1  TAAAATAAAAATTACATACCATCAATTATAAGTGCTATTATTATATATAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAATTACATACCATCAATTATAAGTGCTATTATTATATATAA  450

seq1  TCAATAATGATGAATTGCCATTTTGACATTATTCTTAGATTTTATTATTA  497
      |||||| ||| |||||||||||||||||||||||| ||||||||||||||
seq2  TCAATACTGACGAATTGCCATTTTGACATTATTCTCAGATTTTATTATTA  500

seq1  TATTAATAATTATTTGCTTTATAAGTATAAATTGAAAAATGCATGGTTAT  547
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATTAATAATTATTTGCTTTATAAGTATAAATTGAAAAAGGCATGGTTAT  550

seq1  CCTTTTTTCACTATGTAAATAACACATGTACTCTAATAGAGTATGATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTCACTATGTAAATAACACATGTACTCTAATAGAGTATGATTTT  600

seq1  CTTGATACATCTTAGTGAATGAATTATTTTAGGCAAGAATTCAGGTCATT  647
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTGATACATCTTAGTGAATGAATTATTCTAGGCAAGAATTCAGGTCATT  650

seq1  AATATTGGCCATAAAGTTAATTTGTAAGACTTATGTATTTTGTCATTACA  697
      ||||| |||||||||||||||| ||||||||||||||||| |||||||||
seq2  AATATGGGCCATAAAGTTAATTGGTAAGACTTATGTATTTGGTCATTACA  700

seq1  AAGTTTATTTTTTTAAAAAAGAAACCAATGTAAATGTTGCTTGTATTTCT  747
      ||||||||||||||||||||||||||||||||||||| | | ||||||||
seq2  AAGTTTATTTTTTTAAAAAAGAAACCAATGTAAATGTGGGTGGTATTTCT  750

seq1  TCAGATGATGGGATGAGATGATCTTTATACCCAAGCTATGAGAATACATG  797
      ||||| || ||| ||||| |||||||||||||||| ||||||||| |  |
seq2  TCAGAGGAGGGGCTGAGACGATCTTTATACCCAAGTTATGAGAATCCTCG  800

seq1  GCTTGGCATAAGCCCAATGTGTTTCCTTCTTTGGTCTAACTAACCCTAGG  847
      ||||||||||||||||| | ||||||||||||||||||||||||||||||
seq2  GCTTGGCATAAGCCCAACGCGTTTCCTTCTTTGGTCTAACTAACCCTAGG  850

seq1  CCTAGGCCTGTAAGTTTCTAGTCTCTATAAAATCTAATCTTCTAAGCTGA  897
      ||||||| || ||||||  ||||||||||||||  ||||||||||| |||
seq2  CCTAGGCGTGGAAGTTTAGAGTCTCTATAAAATACAATCTTCTAAGGTGA  900

seq1  CTGATTTAAATAGGCTGCTTCTGACTGAATTCCTC  932
      |||||||||||| |||||||||| |||||||||||
seq2  CTGATTTAAATACGCTGCTTCTGGCTGAATTCCTC  935