BAC Information

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BAC

Clone NameB6Ng01-267H20
Chromosome3 (Build37)
Map Location 141,900,031 - 141,901,045
singlet/doubletsinglet
Overlap genenone
Upstream geneUnc5c, LOC100039923, Bmpr1b, Gabarapl2-ps3
Downstream genePdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H20.bB6Ng01-267H20.g
ACCGA070595GA070596
length1,2041,014
definitionB6Ng01-267H20.b B6Ng01-267H20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaataggggtatttaatta
tctggagtccagctttttgagttctttgtatatactggatattagtcccg
tattagatttaggattggtaaagatcctttcccaatctgttgatggcctt
tttgtcttattgacagtgtcttttgccttacataagctttgcaattttat
gaagtcccatttgtcaattctcgatcatacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggctcttccccacc
ttctcctctataagtttcaagtgtctctggttttatgtggagatccttaa
tccacttagatttgaccttagtacaaggagatagtactggatcaattcga
aatcttctacatgataacagccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaacataggtgtgtgggttcatctctggatcttcaattctattccattga
tctacctgtctgtcattgtaccagtaccatgcagtttttaatcacaattg
ctctgtagtacagcttgaggtcaggtatggtgattccaccagatgttctt
ttattgttgagaatagttttgctatcctaggtttttttgttattccagaa
gaatttgcaaattgccttttctaactctgtgaagaattgaattgggattt
cgatggtgattgcattgaatctgtagattgcttatggcaagatagccatt
tttactatattaatcctgccaatccatgagcatgggagatctttccatcc
tctgagttcttctttgatttctttcttcagagacttgaagttcttatcat
acagatctttcacttccttagttagaatcacagcaaggtattttttatta
tttgtgactattgtgaagggtgctgtttccgtaatttctttctcaccctg
tttattctttgtgtaaagaacggctactaatttgttcagtaatttatatc
cagctactgcactgagcttgtttattaggttagagttctctggtggggat
tttaggcattatatatactatccaattcatctgcaaaatggaatttgacc
ttcttccttccaatgtatctcctgtgaataagccctttttgtgtggtgct
ctat
gaattccaagtgtcaggcgatgaatcagtctaacccagtgaagttcatac
ttggagtctctgctctctacctcaatcaggtcaggcactgagaactctca
agcaaacagggacaatgcttctagagtcaaggtggtgccaacacggggcc
tcacaaaagaaaatttttatttatgcaaaactaatatgctatgacatcac
tggagagccttccacttttctcattgacctagagaaaagttaggttgttg
ttgatctattagtcagaagcaaaaggcacacactgtaaggtagaagagct
aatttcaataccagaaacaaagagacttttgagtaaattaggaaggcacc
aggtgtgtggagacaagcaaagagaaaagcaggggaaagtgtgagagaag
aaaaatctcaattatatttgaattagggaacaaatagagtatgaaatgaa
atactaactaggaatccaactggaatacattggacacagagacaaaaact
gtctttaaaaacatggatcccgaagagagggtgtcaatcaacccctgggc
ctggcacagaagttgttttccttgggaactgcatctaccataactgcgaa
attgaaaaattagaccctccgtgaattctaaattgttttattttctcctg
agtcagtatcagaacggtgtcctgtcgatgttgactgtattgattactct
ctacactaaacaacagctccaagctttattgtgagtaattacatgtagtt
atagaacaggaaaaaaatcgctttcttggcaagcttgtatttaagagggc
ctcccccaggtgctctgccactagtgcaatcatatttagagcacgtcctt
ctcctttcctacattgttcaagggcagaaaaccacctcttttcctattag
gcacccacttacctatacagaacacgcttctaatcatgaaccaagaatag
aaatccaataacctccggtccgtacataaaatgggagatcaatctcttta
aaggaaggttagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141900031_141901045
seq2: B6Ng01-267H20.g_66_1079

seq1  GAATTCCAAGTGTCAGGCGATGAATCAGTCTAACCCAGTGAAGTTCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTGTCAGGCGATGAATCAGTCTAACCCAGTGAAGTTCATAC  50

seq1  TTGGAGTCTCTGCTCTCTACCTCAATCAGGTCAGGCACTGAGAACTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTCTCTGCTCTCTACCTCAATCAGGTCAGGCACTGAGAACTCTCA  100

seq1  AGCAAACAGGGACAATGCTTCTAGAGTCAAGGTGGTGCCAACACGGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAGGGACAATGCTTCTAGAGTCAAGGTGGTGCCAACACGGGGCC  150

seq1  TCACAAAAGAAAATTTTTATTTATGCAAAACTAATATGCTATGACATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAAGAAAATTTTTATTTATGCAAAACTAATATGCTATGACATCAC  200

seq1  TGGAGAGCCTTCCACTTTTCTCATTGACCTAGAGAAAAGTTAGGTTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGCCTTCCACTTTTCTCATTGACCTAGAGAAAAGTTAGGTTGTTG  250

seq1  TTGATCTATTAGTCAGAAGCAAAAGGCACACACTGTAAGGTAGAAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTATTAGTCAGAAGCAAAAGGCACACACTGTAAGGTAGAAGAGCT  300

seq1  AATTTCAATACCAGAAACAAAGAGACTTTTGAGTAAATTAGGAAGGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAATACCAGAAACAAAGAGACTTTTGAGTAAATTAGGAAGGCACC  350

seq1  AGGTGTGTGGAGACAAGCAAAGAGAAAAGCAGGGGAAAGTGTGAGAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGGAGACAAGCAAAGAGAAAAGCAGGGGAAAGTGTGAGAGAAG  400

seq1  AAAAATCTCAATTATATTTGAATTAGGGAACAAATAGAGTATGAAATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTCAATTATATTTGAATTAGGGAACAAATAGAGTATGAAATGAA  450

seq1  ATACTAACTAGGAATCCAACTGGAATACATTGGACACAGAGACAAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAACTAGGAATCCAACTGGAATACATTGGACACAGAGACAAAAACT  500

seq1  GTCTTTAAAAACATGGATCCCGAAGAGAGGGTGTCAATCAACCCCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAAAAACATGGATCCCGAAGAGAGGGTGTCAATCAACCCCTGGGC  550

seq1  CTGGCACAGAAGTTGTTTTCCTTGGGAACTGCATCTACCATAACTGCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACAGAAGTTGTTTTCCTTGGGAACTGCATCTACCATAACTGCGAA  600

seq1  ATTGAAAAATTAGACCCTCCGTGAATTCTAAATTGTTTTATTTTCCTCCC  650
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  ATTGAAAAATTAGACCCTCCGTGAATTCTAAATTGTTTTATTTTC--TCC  648

seq1  TGAGGTCAGTAATCAG--CGGTTTTCTGAC-ATG-GAAATGT-TTTATT-  694
      ||| |||||| |||||  |||| | ||| | |||   | ||| || ||| 
seq2  TGA-GTCAGT-ATCAGAACGGTGTCCTGTCGATGTTGACTGTATTGATTA  696

seq1  CT-TCTACACTAAACAACAGCTCCAAGCTTTATTGTGAGTAATTACATGT  743
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTACACTAAACAACAGCTCCAAGCTTTATTGTGAGTAATTACATGT  746

seq1  AGTTATAGACAGGGAAAAAAATCGCTTTCTTGGCAAGCTGTAATTTAAGA  793
      |||||||||   |||||||||||||||||||||||||||   ||||||||
seq2  AGTTATAGAACAGGAAAAAAATCGCTTTCTTGGCAAGCTTGTATTTAAGA  796

seq1  GGG-CTCCCCCA-GTGCTCTGCCACTAGTGCCAATCATAATTAGAGCACG  841
      ||| |||||||| ||||||||||||||||| |||||||| ||||||||||
seq2  GGGCCTCCCCCAGGTGCTCTGCCACTAGTG-CAATCATATTTAGAGCACG  845

seq1  TCCTCCTC--TTCCTACA-TGTTCAAGGGCAG-AAACCACCTC-TTTCCT  886
      |||| |||  |||||||| ||||||||||||| |||||||||| ||||||
seq2  TCCTTCTCCTTTCCTACATTGTTCAAGGGCAGAAAACCACCTCTTTTCCT  895

seq1  ATTAAGCACCCAC-TACCTATACAG-ACA-GCTTCTAAATCATGGAACCA  933
      |||| |||||||| ||||||||||| ||| |||||| |||||| ||||||
seq2  ATTAGGCACCCACTTACCTATACAGAACACGCTTCT-AATCAT-GAACCA  943

seq1  AGAATAAGAATTCAATAACATACAGTACAGTAACATATAATATGGTGAGT  983
      ||||||  ||| ||||||| | | || | || ||||| |||   | ||| 
seq2  AGAATAGAAATCCAATAACCTCCGGT-CCGT-ACATAAAAT---GGGAG-  987

seq1  ATCAAATTCTCTTTATAAAATGAAGGTTAGGA  1015
      |||||  |||||||   ||| |||||||||||
seq2  ATCAA--TCTCTTT---AAAGGAAGGTTAGGA  1014