BAC Information

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BAC

Clone NameB6Ng01-269K01
Chromosome3 (Build37)
Map Location 102,458,963 - 102,459,681
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043036, BC037703, Slc22a15, Nhlh2, LOC100043047, Casq2, Vangl1, EG433633, Ngfb
Downstream geneTspan2, Tshb, Sycp1, LOC668425, LOC100043517, Nr1h5, 5730470L24Rik, Csde1, Nras, Ampd1, Dennd2c, Bcas2, Trim33, Syt6, Atg4a-ps
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269K01.bB6Ng01-269K01.g
ACCGA072171GA072172
length1,027719
definitionB6Ng01-269K01.b B6Ng01-269K01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttttataccccattttttgattgggttgtttgaaa
ttttttggaggttaacttcttgagtttatattagccctctagcagatgta
gggttagtgaagggttttttttttcccccaatctgaaagttgctgatttg
tactactgacaagaaaaaaaaaaaaaaaaagaagaagaagaagagagctt
ttcagtgtcatgagatcccatttatcaattcttgatcttagaccctgagc
cattgaagttctgtttaggaaatcctcccctactcccgcccccccccccc
ccccgtaccaatgagttcaaggctcttcccagtttctcttttatgagatt
tcagtgtatctggttttatgttgaagtccttgatccacttggacttgagc
tttgtacaaggtgacaaatatggatctattttcattcttctacatacata
catacatacatacatacatacatacatacatactgctagttagaccagca
ccatttattgaagatgctttctctttttcattgtatacttttgactcctt
tgtcaaagatcaagtgtccttaagtgtgtggttttatttctgggtcttca
gttctattccgttgatcaacatgcctgtctctgtaccaataccatgttgt
ttttatcactattttctctgtagtacagcttgtagtcagggatagtgatt
tccccccagaagttcttttattgttgagaattgtttttgctatcctgagt
tttttgtttttgcatatgaaattgagaactgctttttccatgtctttgaa
gaattgtggtcagaatttgttatggttatgggattgcatttgaatctgta
aaatcgctttttagtaggatggcatatctttactatggtaaatctacaat
ctatgataccaggtggaatcgcttcattttcgagattctcgattcctttc
ttgagaagttcttgagtttatgacaacgcaaagcttcacttgttggagta
agagtttaccgagcgatttatacatta
gaattccagcagccacgggctttctccctccccaccccttttaaaaattc
agtccttcagtctccatccataggatactcacctgcaacatttcaggtgg
atatcctccctccgttcatcgtctgccagcaccctcactgacacacccgc
gggctacctccatctcctaggtgattctgaacgcagtcgcatgaaggagg
aggggcagccaccacagaggctttgggcctggcacatatccccttcctgt
gccctttctcactctgctttgacttgaataagatgagctcattcgccatt
caccactagaccatccactgtccacagagcaaacatcagtgagagaaagg
gtgcattcaagtgagacgcaatgctgccttttaaagaagaacagtaagca
tggtggaggactgagagagacatggagtgaacatagcatcttaggcctgg
gtcctgccgggccacatatacatgaattgtgcacaatgccccaactccat
cttcacaccaaccttgaagtagaaatggctgtgccttacagagaaagaaa
accaagtttggaaaagataagtcgatttcctggttcacatgggcactgaa
aagtatgtttggattctagctttgtctctctggatctagagttccaactg
tatccactcacatcacatgacttgggtatacatatgcgtatgagtgtgtg
tgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_102458963_102459681
seq2: B6Ng01-269K01.g_68_786

seq1  GAATTCCAGCAGCCACGGGCTTTCTCCCTCCCCACCCCTTTTAAAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAGCCACGGGCTTTCTCCCTCCCCACCCCTTTTAAAAATTC  50

seq1  AGTCCTTCAGTCTCCATCCATAGGATACTCACCTGCAACATTTCAGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCAGTCTCCATCCATAGGATACTCACCTGCAACATTTCAGGTGG  100

seq1  ATATCCTCCCTCCGTTCATCGTCTGCCAGCACCCTCACTGACACACCCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTCCCTCCGTTCATCGTCTGCCAGCACCCTCACTGACACACCCGC  150

seq1  GGGCTACCTCCATCTCCTAGGTGATTCTGAACGCAGTCGCATGAAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACCTCCATCTCCTAGGTGATTCTGAACGCAGTCGCATGAAGGAGG  200

seq1  AGGGGCAGCCACCACAGAGGCTTTGGGCCTGGCACATATCCCCTTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGCCACCACAGAGGCTTTGGGCCTGGCACATATCCCCTTCCTGT  250

seq1  GCCCTTTCTCACTCTGCTTTGACTTGAATAAGATGAGCTCATTCGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTCTCACTCTGCTTTGACTTGAATAAGATGAGCTCATTCGCCATT  300

seq1  CACCACTAGACCATCCACTGTCCACAGAGCAAACATCAGTGAGAGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTAGACCATCCACTGTCCACAGAGCAAACATCAGTGAGAGAAAGG  350

seq1  GTGCATTCAAGTGAGACGCAATGCTGCCTTTTAAAGAAGAACAGTAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTCAAGTGAGACGCAATGCTGCCTTTTAAAGAAGAACAGTAAGCA  400

seq1  TGGTGGAGGACTGAGAGAGACATGGAGTGAACATAGCATCTTAGGCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGGACTGAGAGAGACATGGAGTGAACATAGCATCTTAGGCCTGG  450

seq1  GTCCTGCCGGGCCACATATACATGAATTGTGCACAATGCCCCAACTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCCGGGCCACATATACATGAATTGTGCACAATGCCCCAACTCCAT  500

seq1  CTTCACACCAACCTTGAAGTAGAAATGGCTGTGCCTTACAGAGAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACCAACCTTGAAGTAGAAATGGCTGTGCCTTACAGAGAAAGAAA  550

seq1  ACCAAGTTTGGAAAAGATAAGTCGATTTCCTGGTTCACATGGGCACTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTTGGAAAAGATAAGTCGATTTCCTGGTTCACATGGGCACTGAA  600

seq1  AAGTATGTTTGGATTCTAGCTTTGTCTCTCTGGATCTAGAGTTCCAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTTTGGATTCTAGCTTTGTCTCTCTGGATCTAGAGTTCCAACTG  650

seq1  TATCCACTCACATCACATGACTTGGGTATACATATGCGTATGAGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTCACATCACATGACTTGGGTATACATATGCGTATGAGTGTGTG  700

seq1  TGTGTGTGTGTGTGTGTGT  719
      |||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGT  719