BAC Information

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BAC

Clone NameB6Ng01-270B08
Chromosome3 (Build37)
Map Location 114,827,096 - 114,828,279
singlet/doubletsinglet
Overlap geneOlfm3
Upstream geneCol11a1, LOC100043220
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B08.bB6Ng01-270B08.g
ACCGA072517GA072518
length5281,172
definitionB6Ng01-270B08.b B6Ng01-270B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttggctctgagccccattttttaatggggttatttgatt
ttctggattccaccttcttgagttctttatacacacacacacacacacac
acacacacacacacacacacacacacacacacacacatacacacacacac
ccacacacatatatatatataaagatctattcagatgtttaaaatgatgc
tttaatatatatattggacattaatcccatatctgatttaggatagataa
agatcctttcccagtctgttggtggcctttttgtcttattgtgggtttct
tttgccttgcaaaatctttacagttttatgaggtcccttttgtcaattct
ccatcttacaccacaagccatgcctgttcaattcatgaatttttcccctg
tgcccatatcttcgaggcttttccccactttctcctctataaatttcagt
gtctctggttgtatgtggagttccttgatccacttacatatgaccttata
acaaggagagaggaatggataaattcgc

gaattccactaaggcacctttatggaaactaaatttttaaaaatatattc
taaaatgaatgacataacttaaattgcaatttttgtctcatatgcataca
aaataccacaattttaaaataagcagatgataatgcagacacagcactct
ataaaaagacactgatatttagagtatttcattttaagttctacaagtga
agggtcattctcaactaccatcctatcaaactggagaatctagttactat
aatcttgaaattcaagaatgaatgagcaggtattttgttttttgggtttt
gttgttgttgatcttattttgttttgttttgtttttttgtcaacaaaagt
taagcatgatctaatgggaacactgcatctttttataatgatgttttctt
ctcttaccaaaagttcatgtaagctctaggctacaagtgagagttagaaa
atttagaagattcatttgtcatactacacatatcacaaaagcaagcagtt
catacttcgtataacaatttgtataaggttaaaaaatcatgtcagtttta
gaaatgaatcaatctttaggtaggcaaactctaataggaacacttcttgt
ttttaagacatgctatgtggtatcacatacattcaaaatatggatgatca
tggcttttttgtgaggtgtgcgccttgtacagagccctgttgttttatat
gtatggtttcattgccctatctatttatagtgtatgtgctgctagagaag
ctaagattttattgtcactagaagtggggtaacatgaactttaaaaatat
gacttgcattaaacgctaacaggttatgagcatttttccttaatagatga
tgttcagtttttgtgcctgaaataaataagaatttaatcactgtttcctt
tttaatttccagcaaataaagtaattttatgaggaaataatgagtatctt
aaaatcatccatagaatctatgagtgcagaagtctattctcagaaaacca
ccatcctaagtaaactatgtactggtatttttctagattatcagatcata
aatactccatgtcattcaaatagtatgctgcgtgggctgtgttggtgtgt
aatcaatttgtggaacttaggtcacaagacttatacttgatctaactaat
ctacaggattccgaaaaatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114827096_114828279
seq2: B6Ng01-270B08.g_63_1234

seq1  GAATTCCACTAAGGCACCTTTATGGAAACTAAATTTTTAAAAATATATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTAAGGCACCTTTATGGAAACTAAATTTTTAAAAATATATTC  50

seq1  TAAAATGAATGACATAACTTAAATTGCAATTTTTGTCTCATATGCATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAATGACATAACTTAAATTGCAATTTTTGTCTCATATGCATACA  100

seq1  AAATACCACAATTTTAAAATAAGCAGATGATAATGCAGACACAGCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCACAATTTTAAAATAAGCAGATGATAATGCAGACACAGCACTCT  150

seq1  ATAAAAAGACACTGATATTTAGAGTATTTCATTTTAAGTTCTACAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGACACTGATATTTAGAGTATTTCATTTTAAGTTCTACAAGTGA  200

seq1  AGGGTCATTCTCAACTACCATCCTATCAAACTGGAGAATCTAGTTACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCATTCTCAACTACCATCCTATCAAACTGGAGAATCTAGTTACTAT  250

seq1  AATCTTGAAATTCAAGAATGAATGAGCAGGTATTTTGTTTTTTGGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAAATTCAAGAATGAATGAGCAGGTATTTTGTTTTTTGGGTTTT  300

seq1  GTTGTTGTTGATCTTATTTTGTTTTGTTTTGTTTTTTTGTCAACAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGATCTTATTTTGTTTTGTTTTGTTTTTTTGTCAACAAAAGT  350

seq1  TAAGCATGATCTAATGGGAACACTGCATCTTTTTATAATGATGTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGATCTAATGGGAACACTGCATCTTTTTATAATGATGTTTTCTT  400

seq1  CTCTTACCAAAAGTTCATGTAAGCTCTAGGCTACAAGTGAGAGTTAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACCAAAAGTTCATGTAAGCTCTAGGCTACAAGTGAGAGTTAGAAA  450

seq1  ATTTAGAAGATTCATTTGTCATACTACACATATCACAAAAGCAAGCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGATTCATTTGTCATACTACACATATCACAAAAGCAAGCAGTT  500

seq1  CATACTTCGTATAACAATTTGTATAAGGTTAAAAAATCATGTCAGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTCGTATAACAATTTGTATAAGGTTAAAAAATCATGTCAGTTTTA  550

seq1  GAAATGAATCAATCTTTAGGTAGGCAAACTCTAATAGGAACACTTCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAATCAATCTTTAGGTAGGCAAACTCTAATAGGAACACTTCTTGT  600

seq1  TTTTAAGACATGCTATGTGGTATCACATACATTCAAAATATGGATGATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGACATGCTATGTGGTATCACATACATTCAAAATATGGATGATCA  650

seq1  TGGCTTTTTTGTGAGGTGTGCGCCTTGTACAGAGCCCTGTTGTTTTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTTTGTGAGGTGTGCGCCTTGTACAGAGCCCTGTTGTTTTATAT  700

seq1  GTATGGTTTCATTGCCCTATCTATTTATAGTGTATGTGCTGCTAGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTTTCATTGCCCTATCTATTTATAGTGTATGTGCTGCTAGAGAAG  750

seq1  CTAAGATTTTATTGTCACTAGAAGTGGGGTAACATGAGCTTTAAAAATAT  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTAAGATTTTATTGTCACTAGAAGTGGGGTAACATGAACTTTAAAAATAT  800

seq1  GACTTGCATTAAACACTAACAGTTTATGAGCA-TTTTCCTTAATAAATTA  849
      |||||||||||||| ||||||| ||||||||| |||||||||||| || |
seq2  GACTTGCATTAAACGCTAACAGGTTATGAGCATTTTTCCTTAATAGATGA  850

seq1  TGTTCAG-TTTTGTGCCTGAAATAAATAAGAATTTAATCACTGTTTCCTT  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTTTTTGTGCCTGAAATAAATAAGAATTTAATCACTGTTTCCTT  900

seq1  TTTAATTTCCAGCAAATAAAGTAATTTTATGAGGAAAATAATGAGTATCT  948
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTAATTTCCAGCAAATAAAGTAATTTTATGAGG-AAATAATGAGTATCT  949

seq1  TAAAATCATCCATAGAATCTAAGGAGTGCAGAAGTCTATTCTCAGAAAAC  998
      |||||||||||||||||||| | |||||||||||||||||||||||||||
seq2  TAAAATCATCCATAGAATCT-ATGAGTGCAGAAGTCTATTCTCAGAAAAC  998

seq1  CACCATCCTAAGTAAACTATGTAACTGGTA-TTTTCTAGATTAATCAGAT  1047
      |||||||||||||||||||||| ||||||| ||||||||||| |||||||
seq2  CACCATCCTAAGTAAACTATGT-ACTGGTATTTTTCTAGATT-ATCAGAT  1046

seq1  CATTAAAATACTTCCATGTCATTCAAATAGTATGCTTGCGGTTGGGTTGT  1097
      |||  |||||| ||||||||||||||||||||||| ||||  |||| |||
seq2  CAT--AAATAC-TCCATGTCATTCAAATAGTATGC-TGCG--TGGGCTGT  1090

seq1  GTTGGTGTGTAATTCATTTTTGTGGAACTTAAGTCACAAGACTTATTACT  1147
      |||||||||||||  |  ||||||||||||| ||||||||||||| ||||
seq2  GTTGGTGTGTAATCAA--TTTGTGGAACTTAGGTCACAAGACTTA-TACT  1137

seq1  TGTATCTAAACTTAAATCTACAGG-TTCAG-AAAATGGC  1184
      || |||| ||||  |||||||||| ||| | ||||||||
seq2  TG-ATCT-AACT--AATCTACAGGATTCCGAAAAATGGC  1172


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