BAC Information

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BAC

Clone NameB6Ng01-272A16
Chromosome3 (Build37)
Map Location 141,513,000 - 141,514,095
singlet/doubletsinglet
Overlap geneBmpr1b
Upstream gene4930590L14Rik, Pdha2, Unc5c, LOC100039923
Downstream geneGabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272A16.bB6Ng01-272A16.g
ACCGA073965GA073966
length8881,100
definitionB6Ng01-272A16.b B6Ng01-272A16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaaatgcttgctctgtctctctctctctgtctccctctctct
ctctgtctatctgtctctctctctctctctctctctctctctctctctct
ctcgctcgcgcgcgcgcgcgcccagtagtcattgatgagagtgattcagt
ttccatgagtttgttggctttctgttgtttctgtggtagttaaaatccag
cttaaacccatggtgatttgattaaatgcaaagggttatttgcatcttct
tgtatctgttcaggctttctttgtgatccaatgatcaatattggagaaga
ttccatgaggtgctgagaagaaggtgtattctttggagtttcggtgaaat
attctatagatatctcttagatctgttaattcataaactgttagtttcat
tatttctttgttaatttctgtctcaatgacgtagccattgttaatagcgt
tgaagtctcccactattaatatgtggagttgaatttattatttaagcttt
agttatattttctttgtgaatgtgggtgcccttgcatttggggcatagct
gtcagaactgagatgtcatcctggtggattttttcctatgttgagtatca
agtgtcctttcccatctcttttaattacttttggttgaaagtctaattta
ttagatattacaatggctactccaggttgtttcttggggtctgtttactt
ggaaaacctctttccagcttccttttctctgtggtagtatctatttcgtt
gctgaggtgtgcttcttatatgaagcagaatgatggatccctgtttagtt
ctgtgccttcttactggtgaattgagccccattgatgttgagagacattt
aatgggccagcaaattgttcctttttttcccccaatgg
gaattctcctggctactgcttctagtaggaaggaagtcaagggggaatag
cttgatttaatgtgtgtgcatgacagggacacagagaagaaaggcaatga
tagataggagcagtgcagtgaggctgccctatcccccaaaggtgccaggc
aggactgtgccaagcggggagcaagggaactacgcattgaagtgcaaatt
tctgacttctttggagactcatgtttttttctgaaaactgtcttatgaga
ggacgctttttatgaagtagacacgtgggaggatgatttgtggagaagag
acatgtggtgttttcctggaagcagcctggaaaaaatggcatgtgatgcc
ttgctagagtagatgcttgagagaacacgtgacgtttgaaaagggtatag
atataacccaacagacagtggacgacatgtgtggtattgctttgccttga
cactctttgctggtcatcatttgtcatgactttatagagagaagcacact
aaaggatttctggtggtgtcccaggggcttcttgcaacttccgtggactc
cggtggattggcagagcctcctgtttcttctgaatggaatgcttggtgct
cattcataaatggtgtttttgagtggatcaaggtagcactgccgattcac
gtgaactggattactaatatcctgacagcacaaattggacttgctccaaa
gacatatttctaagcaggtccgcaccgtcctttgccctattaacctttcc
tttccattacctctggtgggtggtgggttagaagagagattaaagtattt
aagtacacttattaaagtaggatttgaaaaatagaagcctacaattcaca
cagctgggaaatgcatgtttccaccagcttcattcacaacactgtcacat
ggggaaattaaagtttgaattcttacctggcctcattctcttcagggaag
gccagacctctcttttatccatgctgatcaatcccctatttattaccacc
tgccgagcatcactcacaccccacagacctagtagtagacttgtgttcct
tatgtggctcaggtactgcctaagctcagtaaatgatcttgtagtttgaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141513000_141514095
seq2: B6Ng01-272A16.g_66_1165

seq1  GAATTCTCCTGGCTACTGCTTCTAGTAGGAAGGAAGTCAAGGGGGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGCTACTGCTTCTAGTAGGAAGGAAGTCAAGGGGGAATAG  50

seq1  CTTGATTTAATGTGTGTGCATGACAGGGACACAGAGAAGAAAGGCAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTAATGTGTGTGCATGACAGGGACACAGAGAAGAAAGGCAATGA  100

seq1  TAGATAGGAGCAGTGCAGTGAGGCTGCCCTATCCCCCAAAGGTGCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGAGCAGTGCAGTGAGGCTGCCCTATCCCCCAAAGGTGCCAGGC  150

seq1  AGGACTGTGCCAAGCGGGGAGCAAGGGAACTACGCATTGAAGTGCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGTGCCAAGCGGGGAGCAAGGGAACTACGCATTGAAGTGCAAATT  200

seq1  TCTGACTTCTTTGGAGACTCATGTTTTTTTCTGAAAACTGTCTTATGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTCTTTGGAGACTCATGTTTTTTTCTGAAAACTGTCTTATGAGA  250

seq1  GGACGCTTTTTATGAAGTAGACACGTGGGAGGATGATTTGTGGAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCTTTTTATGAAGTAGACACGTGGGAGGATGATTTGTGGAGAAGAG  300

seq1  ACATGTGGTGTTTTCCTGGAAGCAGCCTGGAAAAAATGGCATGTGATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGTGTTTTCCTGGAAGCAGCCTGGAAAAAATGGCATGTGATGCC  350

seq1  TTGCTAGAGTAGATGCTTGAGAGAACACGTGACGTTTGAAAAGGGTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAGTAGATGCTTGAGAGAACACGTGACGTTTGAAAAGGGTATAG  400

seq1  ATATAACCCAACAGACAGTGGACGACATGTGTGGTATTGCTTTGCCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCCAACAGACAGTGGACGACATGTGTGGTATTGCTTTGCCTTGA  450

seq1  CACTCTTTGCTGGTCATCATTTGTCATGACTTTATAGAGAGAAGCACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTGCTGGTCATCATTTGTCATGACTTTATAGAGAGAAGCACACT  500

seq1  AAAGGATTTCTGGTGGTGTCCCAGGGGCTTCTTGCAACTTCCGTGGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTTCTGGTGGTGTCCCAGGGGCTTCTTGCAACTTCCGTGGACTC  550

seq1  CGGTGGATTGGCAGAGCCTCCTGTTTCTTCTGAATGGAATGCTTGGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGATTGGCAGAGCCTCCTGTTTCTTCTGAATGGAATGCTTGGTGCT  600

seq1  CATTCATAAATGGTGTTTTTGAGTGGATCAAGGTAGCACTGCCGATTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATAAATGGTGTTTTTGAGTGGATCAAGGTAGCACTGCCGATTCAC  650

seq1  GTGAACTGGATTACTAATATCCTGACAGCACAAATTGGACTTGCTCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGGATTACTAATATCCTGACAGCACAAATTGGACTTGCTCCAAA  700

seq1  GACATATTTCTAAGCAGGTCCGCACCGTCCTTTGCCCTATTAACCTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTCTAAGCAGGTCCGCACCGTCCTTTGCCCTATTAACCTTTCC  750

seq1  TTTCCATTACCTCTGGTGGGTGGTGGGTTAGAAGAGAGATTAAAGTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTACCTCTGGTGGGTGGTGGGTTAGAAGAGAGATTAAAGTATTT  800

seq1  AAGTACACTTATTAAAGTAGGATTTGAAAAATAGAAGCCTACAATTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACTTATTAAAGTAGGATTTGAAAAATAGAAGCCTACAATTCACA  850

seq1  CAGCTGGGAAATGCATGTTTCCACCAGCTTCATTCACAACACTGTCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGGAAATGCATGTTTCCACCAGCTTCATTCACAACACTGTCACAT  900

seq1  GGGGAAAATAAAGTTTGAATTCTTACCTGGCCTCATTCTC-TCAGGGAA-  948
      ||||||| |||||||||||||||||||||||||||||||| |||||||| 
seq2  GGGGAAATTAAAGTTTGAATTCTTACCTGGCCTCATTCTCTTCAGGGAAG  950

seq1  GCCAGACCTCTCTTTTATCCATGCTGATTCAAT-CCCTATTTA-TACCAC  996
      ||||||||||||||||||||||||||| ||||| ||||||||| ||||||
seq2  GCCAGACCTCTCTTTTATCCATGCTGA-TCAATCCCCTATTTATTACCAC  999

seq1  CTGCCGAGCATCACTCAACACCCACAGACCTAGTTAGTAGAC-TGTGT--  1043
      |||||||||||||||||   ||||||||||||| |||||||| |||||  
seq2  CTGCCGAGCATCACTCACACCCCACAGACCTAG-TAGTAGACTTGTGTTC  1048

seq1  CCTATGT-GCTCAGTGTACTGCTTAAGCTCAGGTAAAATGATC-TGTAGT  1091
      | ||||| |||||| ||||||| |||||||||   |||||||| ||||||
seq2  CTTATGTGGCTCAG-GTACTGCCTAAGCTCAG--TAAATGATCTTGTAGT  1095

seq1  TTGAA  1096
      |||||
seq2  TTGAA  1100