BAC Information

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BAC

Clone NameB6Ng01-273C05
Chromosome3 (Build37)
Map Location 6,802,532 - 6,802,744
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041165, LOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
Downstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273C05.bB6Ng01-273C05.g
ACCGA074785GA074786
length1,171214
definitionB6Ng01-273C05.b B6Ng01-273C05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaactg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggagtattcagcaatacctctcctgggc
atatatccagaagatgccccaactgttaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatactcaagatataagatacaatttgctaaacacatgaaactcaag
aagaataaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaagagctaaagggatctgcaacccta
tagtggacacattatgaactaacagtaccccagtgctcttgactctagct
gcatatgtatcaaaagattgctagtcgtcatcactgaaagagaaggtcca
tgacttgcaaggtttatatgcccagtacaggacgccatgccaaaaggaat
tgggtgcacagggagagtggg
agacaccttatcaccactgcaggagggacaggaggtgtgtttgtgtgtgt
gtgttttgtgtgtccgtccttcgcttcactccaatcttactgaaatctgg
ctagagagagaacacagtcaagtaccaaatagccctgcctctgttatttt
ctctctctcatcaatttctgtatgaaaaaggctaaactctgttatatttt
cacatcctttaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6802532_6802744
seq2: B6Ng01-273C05.g_70_283 (reverse)

seq1  CATTAAAGTATCTGAAACTATATCAGAGTTTAGACTTTTTCATACAGAAA  50
      |||||||| || ||||| |||| |||||||||| ||||||||||||||||
seq2  CATTAAAGGATGTGAAAATATAACAGAGTTTAGCCTTTTTCATACAGAAA  50

seq1  TTGATGAGAGAGAGAAAATAACAGAGGCAGGGCTATTTGGTACTTGACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAGAGAGAGAAAATAACAGAGGCAGGGCTATTTGGTACTTGACTG  100

seq1  TGTTCTCTCTCTAGCCAGATTTCAGTAAGACTGGAGTGAAGCGAAGGACG  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTTCTCTCTCTAGCCAGATTTCAGTAAGATTGGAGTGAAGCGAAGGACG  150

seq1  GACACAC-ACACACACACACACAAACACACCTCCTGTCCCTCCTGCAGTG  199
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAAAACACACACACACAAACACACCTCCTGTCCCTCCTGCAGTG  200

seq1  GTGATAAGGTGTCT  213
      ||||||||||||||
seq2  GTGATAAGGTGTCT  214