BAC Information

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BAC

Clone NameB6Ng01-273F02
Chromosome15 (Build37)3 (Build37)
Map Location 14,694,053 - 14,694,55236,255,151 - 36,255,844
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC666708, LOC674819
Downstream geneLOC100040024, LOC100040033, LOC100040046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273F02.bB6Ng01-273F02.g
ACCGA074923GA074924
length991694
definitionB6Ng01-273F02.b B6Ng01-273F02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,694,053 - 14,694,552)(36,255,151 - 36,255,844)
sequence
gaattcattgatgttaagagatattaagcaaaagtgattattacttcctg
ttatttttgttgttagaggtggaattatgtttgtgtggctatcgtctttt
gggtttgttgaaagattactttcttactttttctagggcatagtttccct
ccttgtgttggttggtgtttttcatctcttatccattatagggctggatt
tgtggaaagatattgtgtaaatttggttttgtcatggaatatcttggttt
ctctgtctatggtaattgaagttttgctgggtagagtaacctgggctggc
atttgtgttctcttagtgtctgtatgacatacatatacatatacatatac
atacacacacacacacacacatgttaggagcaggtgtggcggcagtccca
aaggcgccagggactgtagctaagtcatatgacttgcacctgacttcctc
atataagacacaaacatcttgagtgctgcgcaggtgtaccaggatacagg
tgaatccattttgatggagatatgcccctgctgccctgattagctgaagc
ttcgtgcctggtgaggtggcgtggcctgctgtgcgtggatgagaactgag
agtataaaagagtgagaggcccagggtttcgggcgcgagatataaacaag
ggagatataaacaagggagatatagagaaagaagaaacaggactgaataa
acgtgtgcagaaggatcctgtagcagcgtcgttcttcctggccagttggg
cgcgcgcaacagttggtgccgaaacccgggacaagaaacatcttcaggca
tgagtgaagaccccctgctacagggaggattcagaactgcataacggggg
aagaaggggttataaaggttcccgtgaaacagcctgttgagaaggatccg
gtgtggattcagaactcttcagctggggaacggtactggtaagtctccta
gatgatccctgggttaaagggggatattttaagagaaagaa

gaattctctttaatctctttagagtgacagcagagacagctcatgctttt
tcccccaagaaaagaaaggaagagaaaatatatcccccaaaatttctctt
agatctcttaacaaactgcatgaagttttccttaagctggaagatttgct
ccaaggcggtagccgtgtagcttatgatgtcccttattagtgttttgtat
ataaaaccttgaaggacatagatgctctgaaatctagcttctaggttcag
aatgctctctgagagatatacaacaaaatgttttgaggatccccaacact
ctttaaaatcttgactgatacatacctgttgctctagatggtgtctaagt
gtttacaatatagtttcttgttaagaatcatgggaaatgaatgtctaaaa
cacagaagtaatgtcactgaaaatgaactcacatggaaacaggagaggga
caaatctgaactccctgcttatctagaatgtgaccacagtagatcgaagc
ctaaaacacctcggatattagctagtatcagaaaaagaacccaccactct
gtggtttgacggctccagcacaggcatctccctgtttattctgaatgcag
agcgtgatcacaagtttatctgcagaacactttggtgcaggagcccacct
gtgttggcaattgtgttagccggtgtgtatggggtgttggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_14694053_14694552
seq2: B6Ng01-273F02.b_505_1035

seq1  CAAACATCTTGAGAGCTGCGCAGGTGTACCAGGATACAGGTGAATTCATT  50
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  CAAACATCTTGAGTGCTGCGCAGGTGTACCAGGATACAGGTGAATCCATT  50

seq1  TTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTTCGTGCCTG  100

seq1  GTGAGGTGGCGTGGCCTGTTGTGCCTGGATGGGAACTGAGAGTATAAAAG  150
      |||||||||||||||||| ||||| |||||| ||||||||||||||||||
seq2  GTGAGGTGGCGTGGCCTGCTGTGCGTGGATGAGAACTGAGAGTATAAAAG  150

seq1  AGTGAGAGGCCCAGGG-TTCGG-----------------GGGAGATATAA  182
      |||||||||||||||| |||||                 |||||||||||
seq2  AGTGAGAGGCCCAGGGTTTCGGGCGCGAGATATAAACAAGGGAGATATAA  200

seq1  AC----------------AAGAAGAAACAGGACTGAATAAACGTGTGTGC  216
      ||                ||||||||||||||||||||||||  ||||||
seq2  ACAAGGGAGATATAGAGAAAGAAGAAACAGGACTGAATAAAC--GTGTGC  248

seq1  AGAAGGATCCTGTTGCAGCGTCGTTCTTCCTGGCCAGTTGGGTGCGCGCA  266
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  AGAAGGATCCTGTAGCAGCGTCGTTCTTCCTGGCCAGTTGGGCGCGCGCA  298

seq1  ACAAGTGGTGCCGAAAGCCGGGACAAGAAACATCTTCAGGCACGAGAGAA  316
      |||  ||||||||||| ||||||||||||||||||||||||| ||| |||
seq2  ACAGTTGGTGCCGAAACCCGGGACAAGAAACATCTTCAGGCATGAGTGAA  348

seq1  GACCCCCTGCTACAGGGAGGATTCAGAACTGCATCAC-AGGGAAGGAGCA  365
      |||||||||||||||||||||||||||||||||| ||  |||||| ||  
seq2  GACCCCCTGCTACAGGGAGGATTCAGAACTGCATAACGGGGGAAGAAGGG  398

seq1  GTTATAAAGGTTCCAGTAAAACAGACTGTTGAGAAGGATCCAGCGTGGAT  415
      |||||||||||||| || |||||| |||||||||||||||| | ||||||
seq2  GTTATAAAGGTTCCCGTGAAACAGCCTGTTGAGAAGGATCCGGTGTGGAT  448

seq1  TCAGAACTCTTCAGCTGGGGGACGGTACTGGTAAGTCTCCCAAATTGATG  465
      |||||||||||||||||||| ||||||||||||||||||| | | |||| 
seq2  TCAGAACTCTTCAGCTGGGGAACGGTACTGGTAAGTCTCCTAGA-TGATC  497

seq1  CCCGGGTTAAAGGGGGATATTTTTAAGAAAAAGAA  500
      || |||||||||||||||| |||||||| ||||||
seq2  CCTGGGTTAAAGGGGGATA-TTTTAAGAGAAAGAA  531


seq1: chr3_36255151_36255844
seq2: B6Ng01-273F02.g_67_760 (reverse)

seq1  CACCCCAACACCCCATACACACCGGCTAACACAATTGCCAACACAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAACACCCCATACACACCGGCTAACACAATTGCCAACACAGGTGG  50

seq1  GCTCCTGCACCAAAGTGTTCTGCAGATAAACTTGTGATCACGCTCTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCACCAAAGTGTTCTGCAGATAAACTTGTGATCACGCTCTGCAT  100

seq1  TCAGAATAAACAGGGAGATGCCTGTGCTGGAGCCGTCAAACCACAGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATAAACAGGGAGATGCCTGTGCTGGAGCCGTCAAACCACAGAGTG  150

seq1  GTGGGTTCTTTTTCTGATACTAGCTAATATCCGAGGTGTTTTAGGCTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTCTTTTTCTGATACTAGCTAATATCCGAGGTGTTTTAGGCTTCG  200

seq1  ATCTACTGTGGTCACATTCTAGATAAGCAGGGAGTTCAGATTTGTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGTGGTCACATTCTAGATAAGCAGGGAGTTCAGATTTGTCCCTC  250

seq1  TCCTGTTTCCATGTGAGTTCATTTTCAGTGACATTACTTCTGTGTTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTCCATGTGAGTTCATTTTCAGTGACATTACTTCTGTGTTTTAG  300

seq1  ACATTCATTTCCCATGATTCTTAACAAGAAACTATATTGTAAACACTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATTTCCCATGATTCTTAACAAGAAACTATATTGTAAACACTTAG  350

seq1  ACACCATCTAGAGCAACAGGTATGTATCAGTCAAGATTTTAAAGAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCTAGAGCAACAGGTATGTATCAGTCAAGATTTTAAAGAGTGTT  400

seq1  GGGGATCCTCAAAACATTTTGTTGTATATCTCTCAGAGAGCATTCTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATCCTCAAAACATTTTGTTGTATATCTCTCAGAGAGCATTCTGAAC  450

seq1  CTAGAAGCTAGATTTCAGAGCATCTATGTCCTTCAAGGTTTTATATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCTAGATTTCAGAGCATCTATGTCCTTCAAGGTTTTATATACAA  500

seq1  AACACTAATAAGGGACATCATAAGCTACACGGCTACCGCCTTGGAGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAATAAGGGACATCATAAGCTACACGGCTACCGCCTTGGAGCAAA  550

seq1  TCTTCCAGCTTAAGGAAAACTTCATGCAGTTTGTTAAGAGATCTAAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCTTAAGGAAAACTTCATGCAGTTTGTTAAGAGATCTAAGAGA  600

seq1  AATTTTGGGGGATATATTTTCTCTTCCTTTCTTTTCTTGGGGGAAAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGGGGATATATTTTCTCTTCCTTTCTTTTCTTGGGGGAAAAAGC  650

seq1  ATGAGCTGTCTCTGCTGTCACTCTAAAGAGATTAAAGAGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGTCTCTGCTGTCACTCTAAAGAGATTAAAGAGAATTC  694


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