BAC Information

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BAC

Clone NameB6Ng01-273J17
Chromosome3 (Build37)
Map Location 59,927,567 - 59,928,735
singlet/doubletsinglet
Overlap genenone
Upstream geneP2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1
Downstream geneLOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273J17.bB6Ng01-273J17.g
ACCGA075138GA075139
length1,1691,169
definitionB6Ng01-273J17.b B6Ng01-273J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattcattaaaataaagacaggcactgtgctgtgcgtaggcaga
gcgatgttttattttgtgaaacactagtaattttccaacatctgaaggaa
gttaaaaaacaatcactacgatcattttggtttctctgaagccaacagta
tatgagtaatgctttggcactttatgggtcatccaaaatcatcaaacaga
ctttcaaaagtgcttgcagtaggaaccacacctctttttttttttttttc
ctgggcatggaaaaaccacgtaaaactggctttcagtgaggccagaattg
taagtaacagacacccagtttatttttagagactgggttaccattaatat
atattcagagacttttcagtctgagtgaaacacataaagtccttctcaat
tatttatacagaaaggtttcagtctctactctatgtgctacagagcacat
aaaatatatacagcccaataataggagcatgcttaattaacatactgata
gattcactttcaacacaattaatttgccctaagcagtactcactttatga
ggttttaaattgtcagaaagaggcgtgctcggctccagcttcaacatgag
gcaatggaagatattctttttatgtttttcttttaaagcttgctttgaat
catttccctctgtatttaaggcctcccctcccctcccaaccccacccccc
gccactggagaactaaccaccagaggcttcacccccagctgtctgtctcc
ctctacaaagcctgctctgctgcctcgtgatgcctccctttcgttggaag
ttgacactgtactaataaacattgctggcaagaggctatatttaagacct
gagagcttgggattatttaggagatatagcttagttccttgttgccctga
gtgcttccagaaggcaggaggtactttttgcttctaattaaagtggagaa
tacactgactgacggccattacatgagatgaagtagggtacatatttgga
caggtttatttccagtgggttgcttcatttacagcttagcctttttcgtt
ggtttttagcctgggggaagacagcttcacgcacttcaaataagattaag
tagtcatggtcaccactgggggtcatgctgtgtgtacctctacgaaggcc
accatagctgactggattc
gaattctttgtttacctctgagccccattgtttactggggttatttgtgt
ttctgaagtccaccttcttgagtttttatatatattggatatgcatccca
tatctgatttaggataggtacagatactttcccaatcttttagtgtcctt
tttgtcttattgatggtatcttttgccttacagaagctttgcaattttat
gaggtgccatttgtcaattctcaatcttacagcacaagccagtgctcttc
tattcaggaatttttcccgtctgcccatatcttctaggcttttccccaca
ttctcctctataagtttcagtgtccctagttttatgtggagttccttgat
ccacttagatttcaccttagtacaaggagataggaatggatcaattcgca
ctcttctacatgataaccaccagttgtgccagcaccaattgttggaaatg
ctgtctttttttccactggatggttttaggttccctgtgaaagatcaagt
gaccatagttgtttgggttcatttcttggtcttcaattctattccattgg
tctacttgtttgttgctatacaagtaccatgcagtttttatcacaattgc
tctgcagtacagctttaagtcaggcatggtgattccaccagacgttcttt
tatccttgagaagattttttgctatcctagggtttttgttcttccagatg
aatttacagattgacctttctaattcagtgaagaattgagttggaatttt
gatggggattgcattgaatgtgtagattgcttttggcaagatagccattt
ttactatatttgatcctgccaatccttgagcatgggagatctttccatct
tctgagatcttctttaatttctgtcttcagagacttgaaatttcttatca
tacagatcttttcactttctttgtagagtcacgccaaggtatcttatgtt
atttgtgactattgagaagagtgtgtttcctaatttcttcctcagccttg
tttatcctttgtgtagagaaaggccaattgactgttgagtattttatatc
catctactgcaccgaagctgtcatcagataggagtctctggtgaaatcct
taagatttcctaatatacatcaattcatctggcaaaaggtggtatttgtg
gactcctcctgtctacaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59927567_59928735
seq2: B6Ng01-273J17.b_44_1212 (reverse)

seq1  GAATCCAGTCAGCTATGTTTGCCTTCGTAGAAGTAACAACAGCATGA-CC  49
      ||||||||||||||||| | ||||||||||| |||   ||||||||| ||
seq2  GAATCCAGTCAGCTATGGTGGCCTTCGTAGAGGTACACACAGCATGACCC  50

seq1  CCACTGGTGAACATGACTACTTTATTCTTAATTTTAAAAGTTGCGTGAAG  99
      ||| |||||| ||||||||| ||| |||||  ||| ||   |||||||||
seq2  CCAGTGGTGACCATGACTAC-TTAATCTTA--TTTGAA--GTGCGTGAAG  95

seq1  CTGGTCTT--CCCAGGCTAAAAACAAACGAAAAA-GCTAGGCTGTAAATG  146
      || |||||  |||||||||||||| ||||||||| |||| ||||||||||
seq2  CT-GTCTTCCCCCAGGCTAAAAACCAACGAAAAAGGCTAAGCTGTAAATG  144

seq1  AAGCAA-CCACTGGGAATAAAACCTGTCCAAATATGTA-CCTACTTCATC  194
      |||||| ||||||| ||| ||||||||||||||||||| |||||||||||
seq2  AAGCAACCCACTGGAAAT-AAACCTGTCCAAATATGTACCCTACTTCATC  193

seq1  TCATGTAATGGCCGTCAGTCAGTGTATTCTCCACTTTAATTAGAAGCAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAATGGCCGTCAGTCAGTGTATTCTCCACTTTAATTAGAAGCAAA  243

seq1  AAGTACCTCCTGCCTTCTGGAAGCACTCAGGGCAACAAGGAACTAAGCTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCTCCTGCCTTCTGGAAGCACTCAGGGCAACAAGGAACTAAGCTA  293

seq1  TATCTCCTAAATAATCCCAAGCTCTCAGGTCTTAATTATAGCCTCTTGCC  344
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCTCCTAAATAATCCCAAGCTCTCAGGTCTTAAATATAGCCTCTTGCC  343

seq1  AGCAATGTTTATTAGTACAGTGTCAACTTCCAACGAAAGGGAGGCATCAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGTTTATTAGTACAGTGTCAACTTCCAACGAAAGGGAGGCATCAC  393

seq1  GAGGCAGCAGAGCAGGCTTTGTAGAGGGAGACAGACAGCT-GGGGTGAAG  443
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGGCAGCAGAGCAGGCTTTGTAGAGGGAGACAGACAGCTGGGGGTGAAG  443

seq1  CCTCTGGTGGTTAGTTCTCCAGTGGCGGGGGGTGGGGTGGGGAGGGGAGG  493
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTCTGGTGGTTAGTTCTCCAGTGGCGGGGGGTGGGGTTGGGAGGGGAGG  493

seq1  GGAGGCCTTAAATACAGAGGGAAATGATTCAAAGCAAGCTTTAAAAGAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTTAAATACAGAGGGAAATGATTCAAAGCAAGCTTTAAAAGAAA  543

seq1  AACATAAAAAGAATATCTTCCATTGCCTCATGTTGAAGCTGGAGCCGAGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAAAGAATATCTTCCATTGCCTCATGTTGAAGCTGGAGCCGAGC  593

seq1  ACGCCTCTTTCTGACAATTTAAAACCTCATAAAGTGAGTACTGCTTAGGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTCTTTCTGACAATTTAAAACCTCATAAAGTGAGTACTGCTTAGGG  643

seq1  CAAATTAATTGTGTTGAAAGTGAATCTATCAGTATGTTAATTAAGCATGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAATTGTGTTGAAAGTGAATCTATCAGTATGTTAATTAAGCATGC  693

seq1  TCCTATTATTGGGCTGTATATATTTTATGTGCTCTGTAGCACATAGAGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTATTGGGCTGTATATATTTTATGTGCTCTGTAGCACATAGAGTA  743

seq1  GAGACTGAAACCTTTCTGTATAAATAATTGAGAAGGACTTTATGTGTTTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGAAACCTTTCTGTATAAATAATTGAGAAGGACTTTATGTGTTTC  793

seq1  ACTCAGACTGAAAAGTCTCTGAATATATATTAATGGTAACCCAGTCTCTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGACTGAAAAGTCTCTGAATATATATTAATGGTAACCCAGTCTCTA  843

seq1  AAAATAAACTGGGTGTCTGTTACTTACAATTCTGGCCTCACTGAAAGCCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACTGGGTGTCTGTTACTTACAATTCTGGCCTCACTGAAAGCCA  893

seq1  GTTTTACGTGGTTTTTCCATGCCCAGGAAAAAAAAAAAAAAAGAGGTGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACGTGGTTTTTCCATGCCCAGGAAAAAAAAAAAAAAAGAGGTGTG  943

seq1  GTTCCTACTGCAAGCACTTTTGAAAGTCTGTTTGATGATTTTGGATGACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTACTGCAAGCACTTTTGAAAGTCTGTTTGATGATTTTGGATGACC  993

seq1  CATAAAGTGCCAAAGCATTACTCATATACTGTTGGCTTCAGAGAAACCAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTGCCAAAGCATTACTCATATACTGTTGGCTTCAGAGAAACCAA  1043

seq1  AATGATCGTAGTGATTGTTTTTTAACTTCCTTCAGATGTTGGAAAATTAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCGTAGTGATTGTTTTTTAACTTCCTTCAGATGTTGGAAAATTAC  1093

seq1  TAGTGTTTCACAAAATAAAACATCGCTCTGCCTACGCACAGCACAGTGCC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTCACAAAATAAAACATCGCTCTGCCTACGCACAGCACAGTGCC  1143

seq1  TGTCTTTATTTTAATGAATGGAATTC  1169
      ||||||||||||||||||||||||||
seq2  TGTCTTTATTTTAATGAATGGAATTC  1169