BAC Information

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BAC

Clone NameB6Ng01-274G04
Chromosome3 (Build37)
Map Location 60,049,684 - 60,181,624
singlet/doubletdoublet
Overlap geneLOC669823
Upstream geneP2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1
Downstream geneLOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1, Rap2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274G04.bB6Ng01-274G04.g
ACCGA075700GA075701
length1,1291,067
definitionB6Ng01-274G04.b B6Ng01-274G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,180,484 - 60,181,624)(60,049,684 - 60,050,765)
sequence
gaattctcctgaaaccaggaccagtaagttattctgcgacttctgtcaaa
tatttcatcacactgagaagaaaataattaatatgttattatctcatttg
gataaataccttaacgtggaaattctgtgtcttttggtaaacttgtaatc
caaagcaggcaaaacatgtatgcatgcctacccatcaacaatgaccaagg
actcctcctattgctttcaaactcctggtattttcagtgatagtagattt
tatcattctaataagtgtatagtgatacttcattcttatttaaaatttaa
atttccatgctataaataatgctgtacatatttttatatacttacttttt
gtgagtgttatttctagggtcctgtttgttctgaatttttcatatctaca
gttattatgtaattggtatttaatcttttcagttactttaaaattgaact
atttataatatattttaaaataataataacatcacaccattcttcctgtt
tccatttctacctctagcccctcccacgtctcctctccaaccttcctaag
cctctctccattctcatattgatgtcctcttttttcttgatttagaattt
ttgtgtctctagccagatatatgttttccaaatattctctcttaggttat
aggttgtttgaactttcaaaaaatattacatgtagaaacttttaagagat
tttatggcagcttcattataataagtattctttgtaagataaatttctat
tttagtttttattttttgtgatcctagcagcaaagtccagggatttggca
gtcctttaagcctttatctctaagctacatccccaatcccacttgagcat
tttttaagtatgcaattcattgctcttacttacattctccatatcagtaa
cggtcaggcacagccaggtttcaaaaagtcttgattactcaaaatagaaa
attatcaaagaattcacataaaaccagagaacactgaaactttattagag
gagaaagtggggaaaagccttgaagatatggcacaggggaaaaattcctg
aacagacagcatgcttgtgctgtagatcgagatgacaattggactatgaa
ctccaaggttctgcaagcaaaagacaccg
gaattccttggctatcttgtgcccttcttttcagtcccaactcagcaccc
taaatctgccctcagctttagttactcagttaccttctcctttttttcag
caaccctaaactggcctctctgcttagttatgtttctaatctcccattgg
gggaactggcttatggtcgctccatcagagacctcacatggctagtcatc
ttttctccctccaaagcatggcaaaaatcccctttctctttctgcttccc
ttagcctgcctgtgggatatggaagtcctgcctctttccttccacccagt
aattggctcttagcatctttattgattgatcaagaaccaattgggaaaca
ggactgtagcatcagaaccaacggctacagtgggcaatatcagtaaactg
tataaggccttagctgctgtgggtgccttcaatcaataaggtcccagaca
cctgtgctaaaagccttaaagctgtgggcctgcagactacatccaggagc
ttgctgccctctcctgttcccaaaacccaattattctaatcctatcatct
tcagcaggaatcagatctttcagataataagcatacaatggatgaaaaaa
gtgcttatgacctacttctgttctccatccaatatcatttgctatctctt
ctggcacaattcttggtgttttttttttttttttggtataataaccatat
tttaatcatttactttatttatttaagcacaaccatttttttctccccta
aactgtgaattgtcacagagaacgtacaactaagtcatggatcacaaata
tatgaaagatcccagcaatcttcatgttctttccattcccatgacaaatc
ttccaatcacaaaaagtaaaaaactaaaaaaaaatttcacataaatgtac
tgggctagttttgtgtcaactttgacacagctggagttaccacagagaaa
gagcttcagttgaggaaatgctcatgagatccactgtaagcattttctca
tagtgatcaggggaaagccctgtggttagacaatctctgcctgtagtctg
ggtttataagagagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60180484_60181624
seq2: B6Ng01-274G04.b_41_1169 (reverse)

seq1  CGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTG  50
      |||||||||||| ||||||| ||| |||||| |||| |||   ||| |||
seq2  CGGTGTCTTTTG-CTTGCAG-AACCTTGGAG-TTCA-TAG--TCCAATTG  44

seq1  TCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTT  100
      |||  |||||||| ||||||||||||   ||||| |||||||||||||||
seq2  TCA--TCTCGATC-TACAGCACAAGC--ATGCTG-TCTGTTCAGGAATTT  88

seq1  TTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTA--T  148
      |||||||||| ||||||||||||||||||||||||||||||||||||   
seq2  TTCCCCTGTG-CCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAATA  137

seq1  AAGTTTCAGTG-TCTCTGGTTTTATGTGAAGTTCTTTGATAAATTTTCTA  197
      ||||||||||| |||||||||||||||||| ||||||||| |||||||||
seq2  AAGTTTCAGTGTTCTCTGGTTTTATGTGAA-TTCTTTGAT-AATTTTCTA  185

seq1  TTTTGAGTAATCAAGACTTTTTGAAACCTGGCTGTG-CTGACCGTTACCT  246
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TTTTGAGTAATCAAGACTTTTTGAAACCTGGCTGTGCCTGACCGTTA-CT  234

seq1  GATATGGAGAATGTAAGTAAGAGCAATGAATTGCATACTTAAAAAATGCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGAGAATGTAAGTAAGAGCAATGAATTGCATACTTAAAAAATGCT  284

seq1  CAAGTGGGATTGGGGATGTAGCTTAGAGATAAAGGCTTAAAGGACTGCCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGATTGGGGATGTAGCTTAGAGATAAAGGCTTAAAGGACTGCCA  334

seq1  AATCCCTGGACTTTGCTGCTAGGATCACAAAAAATAAAAACTAAAATAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGGACTTTGCTGCTAGGATCACAAAAAATAAAAACTAAAATAGA  384

seq1  AATTTATCTTACAAAGAATACTTATTATAATGAAGCTGCCATAAAATCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATCTTACAAAGAATACTTATTATAATGAAGCTGCCATAAAATCTC  434

seq1  TTAAAAGTTTCTACATGTAATATTTTTTGAAAGTTCAAACAACCTATAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTTTCTACATGTAATATTTTTTGAAAGTTCAAACAACCTATAAC  484

seq1  CTAAGAGAGAATATTTGGAAAACATATATCTGGCTAGAGACACAAAAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGAGAATATTTGGAAAACATATATCTGGCTAGAGACACAAAAATT  534

seq1  CTAAATCAAGAAAAAAGAGGACATCAATATGAGAATGGAGAGAGGCTTAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCAAGAAAAAAGAGGACATCAATATGAGAATGGAGAGAGGCTTAG  584

seq1  GAAGGTTGGAGAGGAGACGTGGGAGGGGCTAGAGGTAGAAATGGAAACAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGGAGAGGAGACGTGGGAGGGGCTAGAGGTAGAAATGGAAACAG  634

seq1  GAAGAATGGTGTGATGTTATTATTATTTTAAAATATATTATAAATAGTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGGTGTGATGTTATTATTATTTTAAAATATATTATAAATAGTTC  684

seq1  AATTTTAAAGTAACTGAAAAGATTAAATACCAATTACATAATAACTGTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAGTAACTGAAAAGATTAAATACCAATTACATAATAACTGTAG  734

seq1  ATATGAAAAATTCAGAACAAACAGGACCCTAGAAATAACACTCACAAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAAATTCAGAACAAACAGGACCCTAGAAATAACACTCACAAAAA  784

seq1  GTAAGTATATAAAAATATGTACAGCATTATTTATAGCATGGAAATTTAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATATAAAAATATGTACAGCATTATTTATAGCATGGAAATTTAAA  834

seq1  TTTTAAATAAGAATGAAGTATCACTATACACTTATTAGAATGATAAAATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAAGAATGAAGTATCACTATACACTTATTAGAATGATAAAATC  884

seq1  TACTATCACTGAAAATACCAGGAGTTTGAAAGCAATAGGAGGAGTCCTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCACTGAAAATACCAGGAGTTTGAAAGCAATAGGAGGAGTCCTTG  934

seq1  GTCATTGTTGATGGGTAGGCATGCATACATGTTTTGCCTGCTTTGGATTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTTGATGGGTAGGCATGCATACATGTTTTGCCTGCTTTGGATTA  984

seq1  CAAGTTTACCAAAAGACACAGAATTTCCACGTTAAGGTATTTATCCAAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTACCAAAAGACACAGAATTTCCACGTTAAGGTATTTATCCAAAT  1034

seq1  GAGATAATAACATATTAATTATTTTCTTCTCAGTGTGATGAAATATTTGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATAACATATTAATTATTTTCTTCTCAGTGTGATGAAATATTTGA  1084

seq1  CAGAAGTCGCAGAATAACTTACTGGTCCTGGTTTCAGGAGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCGCAGAATAACTTACTGGTCCTGGTTTCAGGAGAATTC  1129

seq1: chr3_60049684_60050765
seq2: B6Ng01-274G04.g_65_1131

seq1  GAATTCCTTGGCTATCTTGTGCCCTTCTTTTCAGTCCCAACTCAGCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGCTATCTTGTGCCCTTCTTTTCAGTCCCAACTCAGCACCC  50

seq1  TAAATCTGCCCTCAGCTTTAGTTACTCAGTTACCTTCTCCTTTTTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGCCCTCAGCTTTAGTTACTCAGTTACCTTCTCCTTTTTTTCAG  100

seq1  CAACCCTAAACTGGCCTCTCTGCTTAGTTATGTTTCTAATCTCCCATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTAAACTGGCCTCTCTGCTTAGTTATGTTTCTAATCTCCCATTGG  150

seq1  GGGAACTGGCTTATGGTCGCTCCATCAGAGACCTCACATGGCTAGTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTGGCTTATGGTCGCTCCATCAGAGACCTCACATGGCTAGTCATC  200

seq1  TTTTCTCCCTCCAAAGCATGGCAAAAATCCCCTTTCTCTTTCTGCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCCTCCAAAGCATGGCAAAAATCCCCTTTCTCTTTCTGCTTCCC  250

seq1  TTAGCCTGCCTGTGGGATATGGAAGTCCTGCCTCTTTCCTTCCACCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTGCCTGTGGGATATGGAAGTCCTGCCTCTTTCCTTCCACCCAGT  300

seq1  AATTGGCTCTTAGCATCTTTATTGATTGATCAAGAACCAATTGGGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCTCTTAGCATCTTTATTGATTGATCAAGAACCAATTGGGAAACA  350

seq1  GGACTGTAGCATCAGAACCAACGGCTACAGTGGGCAATATCAGTAAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAGCATCAGAACCAACGGCTACAGTGGGCAATATCAGTAAACTG  400

seq1  TATAAGGCCTTAGCTGCTGTGGGTGCCTTCAATCAATAAGGTCCCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGCCTTAGCTGCTGTGGGTGCCTTCAATCAATAAGGTCCCAGACA  450

seq1  CCTGTGCTAAAAGCCTTAAAGCTGTGGGCCTGCAGACTACATCCAGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTAAAAGCCTTAAAGCTGTGGGCCTGCAGACTACATCCAGGAGC  500

seq1  TTGCTGCCCTCTCCTGTTCCCAAAACCCAATTATTCTAATCCTATCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCCTCTCCTGTTCCCAAAACCCAATTATTCTAATCCTATCATCT  550

seq1  TCAGCAGGAATCAGATCTTTCAGATAATAAGCATACAATGGATGAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGAATCAGATCTTTCAGATAATAAGCATACAATGGATGAAAAAA  600

seq1  GTGCTTATGACCTACTTCTGTTCTCCATCCAATATCATTTGCTATCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATGACCTACTTCTGTTCTCCATCCAATATCATTTGCTATCTCTT  650

seq1  CTGGCACAATTCTTGGTGTTTTTTTTTTTTTTTTGGTATAATAACCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACAATTCTTGGTGTTTTTTTTTTTTTTTTGGTATAATAACCATAT  700

seq1  TTTAATCATTTACTTTATTTATTTAAGCACAACCATTTTTTTCTCCCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCATTTACTTTATTTATTTAAGCACAACCATTTTTTTCTCCCCTA  750

seq1  AACTGTGAATTGTCACAGAGAACGTACAACTAAGTCATGGATCACAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAATTGTCACAGAGAACGTACAACTAAGTCATGGATCACAAATA  800

seq1  TATGAAAGATCCCAGCAATCTTCATGTTC-TTCCATTCCCATGACAAATC  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TATGAAAGATCCCAGCAATCTTCATGTTCTTTCCATTCCCATGACAAATC  850

seq1  TTCCAATCACAAAAAGTAAAAAACTAAAAAAAAATTTCAACATAAATGTA  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCCAATCACAAAAAGTAAAAAACTAAAAAAAAATTTC-ACATAAATGTA  899

seq1  CT-GGCTAGTTTTGTGTCAAC-TTGACACAGCTGGAGTTACCACAGAGAA  947
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGGGCTAGTTTTGTGTCAACTTTGACACAGCTGGAGTTACCACAGAGAA  949

seq1  AGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCATT  997
      | |||||||||||||||||||||   |||||||||| ||||||| |||||
seq2  A-GAGCTTCAGTTGAGGAAATGC--TCATGAGATCC-ACTGTAA-GCATT  994

seq1  TTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTAGAACCATCT  1047
      ||||||  |||||||||  ||||||||   || ||||| ||| || ||||
seq2  TTCTCA--TAGTGATCA--GGGGAAAG---CCCTGTGGTTAG-ACAATCT  1036

seq1  CTGGGCTGGTAGTCTTGGGTTTTATAAGAGAGCAG  1082
      ||  ||  |||||||  || |||||||||||||||
seq2  CT--GCCTGTAGTCT--GGGTTTATAAGAGAGCAG  1067