BAC Information

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BAC

Clone NameB6Ng01-274I11
Chromosome3 (Build37)
Map Location 17,501,718 - 17,502,794
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040034, LOC100040059, EG383936, LOC622737
Downstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274I11.bB6Ng01-274I11.g
ACCGA075806GA075807
length1,2201,069
definitionB6Ng01-274I11.b B6Ng01-274I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacaccgttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtaaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggattaacattgtaaaaatggctatcttgccaaaag
caatttacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagggcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcatgtagaagaatgcgaatcgatccatacttatc
tccttgcactaaggtcaaatctaagtggatcagtacttcacataaaacca
gagacacctgaaactatagaggagaagtggggaaaagccttgaagaatat
ggtacaggggaaagattcctgaaccgaacagcattgcttgcctctgttaa
gaatcggaattgaccaattgactatgaactcaagttctcggtccaaggct
aaaagaaacacccgccgggc

gaattcatttcttcttcccttcctccttcactcgctatcttgtttctgat
ttcctgttctcgggtctcaacttgtggcccaggaaaatctctgttatgag
gttttgctgcctcagcatcttaaatgctgtaactgggacttctagagtat
cttacagagatatcatcatcatctttctgtgtggtacattatcgggaatc
ttcacagactaattgcatgtactactaggctcactccaaaacctgtaaga
gaaaatataataaacatacactatggaatccaaagttttagtttagtggg
aaagcaatggaactgccgccaagagaatgacagtatgtatatagtaggca
gaaggccatggagtgagaaacaagaaaacaaagcatagaaaccaggctaa
ggggaaagaatggaggaggaaagcaaccaattacacttagagaaaagtgg
tatttacaggaaaactaggtaggtacatatcagtacacaatatataagca
agtacaatgagtacataatcatctatgatctagaaagttttcatcagaaa
tgggatttgattccactcctacttactgtccttttcactgtgtttgtgct
gatacaataatgaatatggatagaaaaataggaaacccaagagccaaaca
atttgtctttctataccacaataagcttgggacattttgtatgtagggcc
tccttactggtccacatgtaaaacatgtatgccttggtttctttgcaaga
gaaatgggaattatccagtatcctttctataacaactcctacttcatgta
gtgatggccttctgcaatgtatggatatctgtcagatataggatacactt
ggtctctacagagcagagcaatactgacactggggcattaatcatattag
cccaagttaattaatttgtagaccccaagtcaatgaatctaacatcaaaa
gtcaaaacttactctactcatcttaaagcttcaagagaaagaaaaagtat
agtaatatatatatatatatatatatatatatatatgtatatatatattt
ccaattcatcacgaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17501718_17502794
seq2: B6Ng01-274I11.g_64_1132

seq1  GAATTCATTTCTTCTTCCCTTCCTCCTTCACTCGCTATCTTGTTTCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTTCTTCCCTTCCTCCTTCACTCGCTATCTTGTTTCTGAT  50

seq1  TTCCTGTTCTCGGGTCTCAACTTGTGGCCCAGGAAAATCTCTGTTATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTCTCGGGTCTCAACTTGTGGCCCAGGAAAATCTCTGTTATGAG  100

seq1  GTTTTGCTGCCTCAGCATCTTAAATGCTGTAACTGGGACTTCTAGAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTGCCTCAGCATCTTAAATGCTGTAACTGGGACTTCTAGAGTAT  150

seq1  CTTACAGAGATATCATCATCATCTTTCTGTGTGGTACATTATCGGGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGAGATATCATCATCATCTTTCTGTGTGGTACATTATCGGGAATC  200

seq1  TTCACAGACTAATTGCATGTACTACTAGGCTCACTCCAAAACCTGTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGACTAATTGCATGTACTACTAGGCTCACTCCAAAACCTGTAAGA  250

seq1  GAAAATATAATAAACATACACTATGGAATCCAAAGTTTTAGTTTAGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATAATAAACATACACTATGGAATCCAAAGTTTTAGTTTAGTGGG  300

seq1  AAAGCAATGGAACTGCCGCCAAGAGAATGACAGTATGTATATAGTAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATGGAACTGCCGCCAAGAGAATGACAGTATGTATATAGTAGGCA  350

seq1  GAAGGCCATGGAGTGAGAAACAAGAAAACAAAGCATAGAAACCAGGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCATGGAGTGAGAAACAAGAAAACAAAGCATAGAAACCAGGCTAA  400

seq1  GGGGAAAGAATGGAGGAGGAAAGCAACCAATTACACTTAGAGAAAAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGAATGGAGGAGGAAAGCAACCAATTACACTTAGAGAAAAGTGG  450

seq1  TATTTACAGGAAAACTAGGTAGGTACATATCAGTACACAATATATAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACAGGAAAACTAGGTAGGTACATATCAGTACACAATATATAAGCA  500

seq1  AGTACAATGAGTACATAATCATCTATGATCTAGAAAGTTTTCATCAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATGAGTACATAATCATCTATGATCTAGAAAGTTTTCATCAGAAA  550

seq1  TGGGATTTGATTCCACTCCTACTTACTGTCCTTTTCACTGTGTTTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTGATTCCACTCCTACTTACTGTCCTTTTCACTGTGTTTGTGCT  600

seq1  GATACAATAATGAATATGGATAGAAAAATAGGAAACCCAAGAGCCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAATAATGAATATGGATAGAAAAATAGGAAACCCAAGAGCCAAACA  650

seq1  ATTTGTCTTTCTATACCACAATAAGCTTGGGACATTTTGTATGTAGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTTTCTATACCACAATAAGCTTGGGACATTTTGTATGTAGGGCC  700

seq1  TCCTTACTGGTCCACATGTAAAACATGTATGCCTTGGTTTCTTTGCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTGGTCCACATGTAAAACATGTATGCCTTGGTTTCTTTGCAAGA  750

seq1  GAAATGGGAATTATCCAGTATCCTTTCTATAACAACTCCTACTTCATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGGAATTATCCAGTATCCTTTCTATAACAACTCCTACTTCATGTA  800

seq1  GTGATGGCCTTCTGCAATGTATGGATATCTGTCAGATATAGGATACACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCTTCTGCAATGTATGGATATCTGTCAGATATAGGATACACTT  850

seq1  GGTCTCTACAGAGCAGAGCAATACTGACACTGGGGCATTAATCATATTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTACAGAGCAGAGCAATACTGACACTGGGGCATTAATCATATTAG  900

seq1  CCCAAGTTAATTAATTTGTAGACCCCAAGTCAATGAATCTAACATCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTAATTAATTTGTAGACCCCAAGTCAATGAATCTAACATCAAAA  950

seq1  GTCAAAACTTACTCTACTCATCTTAAAAGCTTCAAAGAGAAAAGAAAAAG  1000
      |||||||||||||||||||||||| |||||||| ||||| ||||||||||
seq2  GTCAAAACTTACTCTACTCATCTT-AAAGCTTC-AAGAG-AAAGAAAAAG  997

seq1  TATAGTAAATATATATATATATATATATATATATATATATATGTATATAT  1050
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTA---ATATATATATATATATATATATATATATATATGTATATAT  1044

seq1  ATATTTCAAATTCCATCAAAGAAAATT  1077
      ||||||| |||| |||| | |||||||
seq2  ATATTTCCAATT-CATC-ACGAAAATT  1069


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