BAC Information

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BAC

Clone NameB6Ng01-275G24
Chromosome3 (Build37)
Map Location 7,943,199 - 7,944,311
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7, LOC620822
Downstream geneLOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275G24.b
ACCGA076476
length1,108
definitionB6Ng01-275G24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagtggcctgttaaaagaataagctttcgtttttctgcctca
agaagctgaggcaattaagggaagatgtggagcgctggggtgctgcgttt
ccgttgttacctggagtctgttctttccaaagccccctttgcttacaagt
ggatccgacagcactaatttatgagggtggttttacttgagttacttgtt
ctcactgttaagtcgttttcataattgctaattagatgtcaagaaaagta
ttactagaggatagagttcctttctgtcaggctgttgcaacataatactc
cctctgcatgttgctctgtgtgagtgtatgtacataactggcttaaagag
ctcagtgcctcgagccccgtgcctccatagactgtgactatatgtggcca
attacatttcctctgtttttaataatgtggccattgatttactagcccac
attcttctctgatcattaatttttatgggcttccatcttttgaatcatcc
acatgtggtttgttacagcagcactttcctgccaccatgtattttaagct
tataaacagaacagaatcatattgttcccatagaaactgccaaacactgc
agagccaaagctttgaatctgcaactgttattgtatagaggttcatgccc
tgtagcagcatatctaatttccagtgtccttgacaggaagatgcagttaa
ccccaatgccattacatctaattgtttattttattttcattttatacagg
ttggatctgttgtaaccattcaggaggggtaagtccatcacagccaatca
agtcaggtttgctgcgaatgagaaaagagtctcattctaaagaaaagaat
ggaaatcaagggtgaaatttccataatttttattcatccatccatccatt
cattcattcacttgctcattcattcaaatattattataactaacgcagat
gaggcagcctacttcagtcctgggaattctagtgatgagcagacaaagtt
tctgactctgatgcttaccatacaagatatgggaaataaaattcccaaat
tgagagagagagaagagagagaacgagagagtaggagagagagagagtta
gagagcga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7943199_7944311
seq2: B6Ng01-275G24.b_44_1151 (reverse)

seq1  TCGCTCTCTAACTCTCTCTCTCTCTTTCTCTCTCTGTCTCTCTCTTTCTC  50
      |||||||||||||||||||||||| | |||||||  |||||||| |||||
seq2  TCGCTCTCTAACTCTCTCTCTCTCCTACTCTCTCGTTCTCTCTC-TTCTC  49

seq1  TCTCTCTCATTTTGGGAAATTTTATTT-CCATATTCTTTGTATGGTAAGC  99
      ||||||||| |||||| |||||||||| ||||||   |||||||||||||
seq2  TCTCTCTCAATTTGGG-AATTTTATTTCCCATAT--CTTGTATGGTAAGC  96

seq1  ATCAGAGTCAGAAACTTTGTCCTGCTCATCACTAGAATTCCCAGGACTGA  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATCAGAGTCAGAAACTTTGT-CTGCTCATCACTAGAATTCCCAGGACTGA  145

seq1  AGTAGGCCTGCCTCATCTGCGTTAGTTATAATAATATTTGAATGAATGAG  199
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGG-CTGCCTCATCTGCGTTAGTTATAATAATATTTGAATGAATGAG  194

seq1  CAAGTGAATGAATGAATGGATGGATGGATGAATAAAAATTATGGAAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAATGAATGAATGGATGGATGGATGAATAAAAATTATGGAAATTT  244

seq1  CACCCTTGATTTCCATTCTTTTCTTTAGAATGAGACTCTTTTCTCATTCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTGATTTCCATTCTTTTCTTTAGAATGAGACTCTTTTCTCATTCG  294

seq1  CAGCAAACCTGACTTGATTGGCTGTGATGGACTTACCCCTCCTGAATGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAACCTGACTTGATTGGCTGTGATGGACTTACCCCTCCTGAATGGT  344

seq1  TACAACAGATCCAACCTGTATAAAATGAAAATAAAATAAACAATTAGATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACAGATCCAACCTGTATAAAATGAAAATAAAATAAACAATTAGATG  394

seq1  TAATGGCATTGGGGTTAACTGCATCTTCCTGTCAAGGACACTGGAAATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCATTGGGGTTAACTGCATCTTCCTGTCAAGGACACTGGAAATTA  444

seq1  GATATGCTGCTACAGGGCATGAACCTCTATACAATAACAGTTGCAGATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCTGCTACAGGGCATGAACCTCTATACAATAACAGTTGCAGATTC  494

seq1  AAAGCTTTGGCTCTGCAGTGTTTGGCAGTTTCTATGGGAACAATATGATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGGCTCTGCAGTGTTTGGCAGTTTCTATGGGAACAATATGATT  544

seq1  CTGTTCTGTTTATAAGCTTAAAATACATGGTGGCAGGAAAGTGCTGCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTTTATAAGCTTAAAATACATGGTGGCAGGAAAGTGCTGCTGT  594

seq1  AACAAACCACATGTGGATGATTCAAAAGATGGAAGCCCATAAAAATTAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCACATGTGGATGATTCAAAAGATGGAAGCCCATAAAAATTAAT  644

seq1  GATCAGAGAAGAATGTGGGCTAGTAAATCAATGGCCACATTATTAAAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAGAAGAATGTGGGCTAGTAAATCAATGGCCACATTATTAAAAAC  694

seq1  AGAGGAAATGTAATTGGCCACATATAGTCACAGTCTATGGAGGCACGGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATGTAATTGGCCACATATAGTCACAGTCTATGGAGGCACGGGG  744

seq1  CTCGAGGCACTGAGCTCTTTAAGCCAGTTATGTACATACACTCACACAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGCACTGAGCTCTTTAAGCCAGTTATGTACATACACTCACACAGA  794

seq1  GCAACATGCAGAGGGAGTATTATGTTGCAACAGCCTGACAGAAAGGAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGCAGAGGGAGTATTATGTTGCAACAGCCTGACAGAAAGGAACT  844

seq1  CTATCCTCTAGTAATACTTTTCTTGACATCTAATTAGCAATTATGAAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTCTAGTAATACTTTTCTTGACATCTAATTAGCAATTATGAAAAC  894

seq1  GACTTAACAGTGAGAACAAGTAACTCAAGTAAAACCACCCTCATAAATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAACAGTGAGAACAAGTAACTCAAGTAAAACCACCCTCATAAATTA  944

seq1  GTGCTGTCGGATCCACTTGTAAGCAAAGGGGGCTTTGGAAAGAACAGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTCGGATCCACTTGTAAGCAAAGGGGGCTTTGGAAAGAACAGACT  994

seq1  CCAGGTAACAACGGAAACGCAGCACCCCAGCGCTCCACATCTTCCCTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAACAACGGAAACGCAGCACCCCAGCGCTCCACATCTTCCCTTAA  1044

seq1  TTGCCTCAGCTTCTTGAGGCAGAAAAACGAAAGCTTATTCTTTTAACAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCAGCTTCTTGAGGCAGAAAAACGAAAGCTTATTCTTTTAACAGG  1094

seq1  CCACTAAAGAATTC  1113
      ||||||||||||||
seq2  CCACTAAAGAATTC  1108