BAC Information

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BAC

Clone NameB6Ng01-275K21
Chromosome3 (Build37)9 (Build37)
Map Location 76,756,870 - 76,758,03164,147,213 - 64,151,381
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGolph4, Fstl5, LOC100041625
Downstream geneLOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275K21.bB6Ng01-275K21.g
ACCGA076651GA076652
length1,166447
definitionB6Ng01-275K21.b B6Ng01-275K21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(76,756,870 - 76,758,031)(64,147,213 - 64,151,381)
sequence
gaattctctgtttagatctgttccccgtttttaaattgggttgtttgttt
ctttgatgtctagtttcttgagatggaattatattttggatattaaatct
ctattaaatgttgagttaaaaaaaaatgtggagttggaaaaaagaatttc
cattctctacaatgttgttttgtcttattgatggtgtcctttgccttaca
gaagattttctgttctataaggttccatttattaatttttttctcagtgc
ctgtgatattattggttaaaactattttaaggtgaaagaaaatgaaacac
aatacttgacattttatctgtaggcacacggagttcaccaattatcactg
atattttcacattttgtctggtctgtctgtggcttgccatctcttacttc
aacttagctactaatctgcttgtttacctaacacctcttatgatttctgg
cactgcacataacaaggcatctttgattaaactgagactttttccatagg
tctcattgccgtgcttagtatcacattgcttacgacaaatataacacttc
tctgatattagttaattacttcagcttccatttccttacttacagtgatt
agagtagtaggcacatcagagatccagaaatacacgaattagaacagatt
caaacatattatgaacatagcaatttaggagtgattctaactatggggat
agttttaaatggtcatgtttactttcaaacactgacagaattttcttctt
cctttccttttttctttctgctttggttgtctctggtaaggataagtctc
aacctttatgaattcttggcaagcaatctactactgagctgccttcctgg
tcctgagaatgaaagtttctaagtgaagaaaagaaaactttgttgtttta
agttcttaattttggggagttgtttcttctccaagagtgcctggctttaa
tatgcaacaggcagttatgaccacaaatgatacattattatctttactgt
ctattttttatgggtgtatattttgtatttatttgtatttaactgtatca
gtacgggtgatcctttttttatatgagtgcatcaatggtgtattcatctt
agcaattatttgacagcacatatcttaactagttgtactattataataaa
tgttaattagaaagat

atttcctctttaagggccttgcctcttcatgaagttgattttgaggtaac
tcagcgtgtactctagtagaacagctgggctctgcttgtgacatacttct
ctggctatcgcttatgttcttatgctattctccaggcattgggtttgggg
taaatataggtataggtgcctgccaattctaaaatttgtctttgttaaat
aggtgttttttttttcttttattggatattttctttgtttacatttctaa
tgttatcctctctccagtcttccctctgggaccccctagctgattctcca
cccacccacccacccactcactcctgtcttcctgtcctggcattccccta
cacaggggcatcgaacaccctcgggctcaagggttgctcttcccatttat
gtccaacaaggctatccttttttttttttttttttgggggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76756870_76758031
seq2: B6Ng01-275K21.b_47_1212

seq1  GAATTCTCTGTTTAGATCTGTTCCCCGTTTTTAAATTGGGTTGTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGATCTGTTCCCCGTTTTTAAATTGGGTTGTTTGTTT  50

seq1  CTTTGATGTCTAGTTTCTTGAGATGGAATTATATTTTGGATATTAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGTCTAGTTTCTTGAGATGGAATTATATTTTGGATATTAAATCT  100

seq1  CTATTAAATGTTGAGTTAAAAAAAAATGTGGAGTTGGAAAAAAGAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAATGTTGAGTTAAAAAAAAATGTGGAGTTGGAAAAAAGAATTTC  150

seq1  CATTCTCTACAATGTTGTTTTGTCTTATTGATGGTGTCCTTTGCCTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTACAATGTTGTTTTGTCTTATTGATGGTGTCCTTTGCCTTACA  200

seq1  GAAGATTTTCTGTTCTATAAGGTTCCATTTATTAATTTTTTTCTCAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTTCTGTTCTATAAGGTTCCATTTATTAATTTTTTTCTCAGTGC  250

seq1  CTGTGATATTATTGGTTAAAACTATTTTAAGGTGAAAGAAAATGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATATTATTGGTTAAAACTATTTTAAGGTGAAAGAAAATGAAACAC  300

seq1  AATACTTGACATTTTATCTGTAGGCACACGGAGTTCACCAATTATCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGACATTTTATCTGTAGGCACACGGAGTTCACCAATTATCACTG  350

seq1  ATATTTTCACATTTTGTCTGGTCTGTCTGTGGCTTGCCATCTCTTACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCACATTTTGTCTGGTCTGTCTGTGGCTTGCCATCTCTTACTTC  400

seq1  AACTTAGCTACTAATCTGCTTGTTTACCTAACACCTCTTATGATTTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGCTACTAATCTGCTTGTTTACCTAACACCTCTTATGATTTCTGG  450

seq1  CACTGCACATAACAAGGCATCTTTGATTAAACTGAGACTTTTTCCATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCACATAACAAGGCATCTTTGATTAAACTGAGACTTTTTCCATAGG  500

seq1  TCTCATTGCCGTGCTTAGTATCACATTGCTTACGACAAATATAACACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGCCGTGCTTAGTATCACATTGCTTACGACAAATATAACACTTC  550

seq1  TCTGATATTAGTTAATTACTTCAGCTTCCATTTCCTTACTTACAGTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATATTAGTTAATTACTTCAGCTTCCATTTCCTTACTTACAGTGATT  600

seq1  AGAGTAGTAGGCACATCAGAGATCCAGAAATACACGAATTAGAACAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTAGGCACATCAGAGATCCAGAAATACACGAATTAGAACAGATT  650

seq1  CAAACATATTATGAACATAGCAATTTAGGAGTGATTCTAACTATGGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATATTATGAACATAGCAATTTAGGAGTGATTCTAACTATGGGGAT  700

seq1  AGTTTTAAATGGTCATGTTTACTTTCAAACACTGACAGAATTTTCTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAATGGTCATGTTTACTTTCAAACACTGACAGAATTTTCTTCTT  750

seq1  CCTTTCCTTTTTTCTTTCTGCTTTGGTTGTCTCTGGTAAGGATAAGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTTTTTCTTTCTGCTTTGGTTGTCTCTGGTAAGGATAAGTCTC  800

seq1  AACCTTTATGAATTCTTGGCAAGCAATCTACTACTGAGCTGCCTTCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTATGAATTCTTGGCAAGCAATCTACTACTGAGCTGCCTTCCTGG  850

seq1  TCCTGAGAATGAAAGTTTCTAAGTGAAGAAAAGAAAACTTTGTTGTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGAATGAAAGTTTCTAAGTGAAGAAAAGAAAACTTTGTTGTTTTA  900

seq1  AGTTCTTAATTTTGGGGAGTTGTTTCTTCTCCAAGAGTGCCTGGCTTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAATTTTGGGGAGTTGTTTCTTCTCCAAGAGTGCCTGGCTTTAA  950

seq1  TATGCAACAGGCAGTTATGAACACAAATGATAACATTA-TATCTTTACTG  999
      |||||||||||||||||||| |||||||||| |||||| |||||||||||
seq2  TATGCAACAGGCAGTTATGACCACAAATGAT-ACATTATTATCTTTACTG  999

seq1  TCTA-TTTTTATGGGTGTATATTTTGTATTTATTTGTTATTTAACTGTAT  1048
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTATTTTTTATGGGTGTATATTTTGTATTTATTTG-TATTTAACTGTAT  1048

seq1  CAGTAC-GGTGATC--TTTTTTATATGAGTGCAATCAT-GTGTATTCATC  1094
      |||||| |||||||  |||||||||||||||||   || |||||||||||
seq2  CAGTACGGGTGATCCTTTTTTTATATGAGTGCATCAATGGTGTATTCATC  1098

seq1  TTAGCAATTATTTTAACAGCA-ACATACTAACTAGTTGTACTAATTATAA  1143
      |||||||||| ||| |||||| | ||  |||||||||||||| |||||||
seq2  TTAGCAATTA-TTTGACAGCACATATCTTAACTAGTTGTACT-ATTATAA  1146

seq1  T-AATGTT-ATTAGAAGAGAT  1162
      | |||||| ||||||| ||||
seq2  TAAATGTTAATTAGAA-AGAT  1166


seq1: chr9_64147213_64151381
seq2: B6Ng01-275K21.g_281_516 (reverse)

seq1  ACCCCCCCCCCCAAAAAAAAAAAAAAAAGGGAAAAAAAGAATAGCTTTTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TATGTAGTGGAGTGTTGGCTCTCCTGGAACTCACTCTGTAGACTGCTCTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  AACCCTCAACTCAGAGATCTGCCTGCCTTTGCCTCTCCAGTACTGTGTGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGCACCACTGTTACCTCACTAAGATTTTTATACTTCTAATAGATCTAT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCAGTCAAGTCAGTCCTCTGCCTTAACATTGCAGTGGCTTCTTATTTC  250
                                                        
seq2  --------------------------------------------------  0

seq1  ATTAAGAGTAAAACCTGCAATTTCCCCTGGATCAAAATAGTTAATTTTCT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCCTCTTCAAACTGTGCTTAGATATCAACTGATTTAAATCTTCCTGAC  350
                                                        
seq2  --------------------------------------------------  0

seq1  TACTCTGTTAAAATTACATCCCTCTCATTCATTACTTTCTCCTGCTGTTC  400
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCTTTTCTTCCCTTTTTTGGGGGGGTGGGGTGGGGGCTATTCAAGTTG  450
                                                        
seq2  --------------------------------------------------  0

seq1  GATTTCTCTTTATTTCTGTTTGTCCTGTGGACCTCCCAGGTGCTGGGATT  500
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGACTCATGCCACCATGCCTGACCCTTTTTAAAAAAAAAAATGACAGC  550
                                                        
seq2  --------------------------------------------------  0

seq1  ATCGGGGCTGGAGAGATGGCTTAGCCAATAAGAGCACTGACTGCTCTTCT  600
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC  650
                                                        
seq2  --------------------------------------------------  0

seq1  AGTAATGAGATCTGAAGCCCTCTCTGGAGAGTCTGAAGACAGCTACAGTG  700
                                                        
seq2  --------------------------------------------------  0

seq1  TACTTAAATATAATAAGTAATTAAACCTTTAAAAACAAAAACAGTGACAG  750
                                                        
seq2  --------------------------------------------------  0

seq1  CATCTCAAGCCAGGTGGGGTGGTGGCGGTGGCCAGCACTCTGGAGGCAGA  800
                                                        
seq2  --------------------------------------------------  0

seq1  GGCAGACAGATCTCAGAGTTCAAGGCCAACCTAATTTACACATCACATTC  850
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGATAGCCAGGACTATATAGAGAAAAACAAAACAAAACCAGAAAGTCA  900
                                                        
seq2  --------------------------------------------------  0

seq1  GGATCTCAAGTAATCCAGAGTAGCTTTAAACTTGCTAGGTAGTAGAACCT  950
                                                        
seq2  --------------------------------------------------  0

seq1  TGAACTTCTCATCCCCCTGCCTCCACCCCTGTCTGGTGTACTGAAATTAC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  AGATTTGTACTACCAAATTTGACTTTGTTATGTATTTTGGTTTTTGAGAC  1050
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGTCTTACTTAAGCTGACCTTTAGCTCACCACTGATGATGATCCCCAG  1100
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCTCTCTTCCAGATTCTGGCATTACCCGAGTTTTTCACTATGCCATTT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ATACTGTACTGGAGATCAAACCCGGGGCTTTGTGTTTGCTATACCAACTG  1200
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTATCTTCCCAGACCCCTTTTCCATGTCCACTAGATGTAGCATGCAGC  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TTACTATAAGAGTAATTTGTAAATATTTCTTTACCTGAATCAGCCAGTGT  1300
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCTTCTACTTCACAAATGCTTTCTTCAGGTCAGGCCACTTGCCATTTT  1350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACTTAAGTCAGTTGAAGGCTGGTGAGATAGATGGCTCAGTGGTTAAG  1400
                                                        
seq2  --------------------------------------------------  0

seq1  AGCACTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATGCCAGCAACCACA  1450
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTGGCTCACAACCATCCATAACGAGACCTGATGCCCTCTTCTGGTGTG  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGACGACAGCTACAGTATACTTATGTATAATAATAAGTAAATCTTTAA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  ACACAACCTTGTCAGCTGCATGTTGGATCAGTTCTTTCTCTAACTCATCT  1600
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTTACACTTGTGTTAACTTTATTTCTCCCACAGATGAAGTTGGAGAA  1650
                                                        
seq2  --------------------------------------------------  0

seq1  GCTAATGGCCCAGATGTATCTGCTACTGGATTTGATCCCTTCTTGACAAG  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTCTGACAGCAGGAAGTTTGCTTCTGAACCAACTAGAAGCCTAACAG  1750
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAGCAGCAACAGAGAATTGAGAGAAATAAACAGCTGGCCTTGGAAAGA  1800
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCAGGCAAAGCTACTGAGTAATAGCCAGTCCCTAGAAAATGGTAAATT  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TTATGCTGTTTTTTATGAGCTACTATATAATATCAAGGGCATGTTAGAAA  1900
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTAACTTCTTTACTATCTCTTGAAATAATACCTCTAGGAATAGAAAAG  1950
                                                        
seq2  --------------------------------------------------  0

seq1  TGATGTCAAGTTTATGTATGTATTTTAGAGAGAGTGTCAGTGTATGTGTG  2000
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGCTGCTTGGAATCCTTAAAGAATGTTTAAGATGGTTTTCTGGACAGT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GCCAATATATTAACATTGTATTCTTTGACTTCTTATCTTAAAGTACATGT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTTAGGATCATACTTAGGAAAATTATTATTGTTGTGGAATCAATACA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTAGTTCTGGGGACTGAACCCAGCACTTGACACATACTAGGCAGGCAC  2200
                                                        
seq2  --------------------------------------------------  0

seq1  TATATGACCTACACAGGGTCTCAATAGGTTGCCCAGGCTAGCCTTAACCC  2250
                                                        
seq2  --------------------------------------------------  0

seq1  AATTCTATAACCTAGACAGGCCTTGAACTTGCCTTTTCTCAGCCTCCTGA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCTCAGATTATAGGCTTGCACTACTGCACCAGCTTGTGATAATAGTAA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  ATATAATGTCTCTGTACTCACTAAGGATTAGCAGTCAATTTCTGTGATAT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGTGGTACTAAAATGCTTTTTTAGGGATGTCAGACATTGGAGATTGA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  AACGGGCTTGGACAAGCTGAGTAAGCACTCTTTCACTGAGCTGTATGTAT  2500
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCAGCCCTTCCTTCAATTTTTATTTTGAGTTTAGGTCTTCCTAAGTTA  2550
                                                        
seq2  --------------------------------------------------  0

seq1  GTTACACAGTTAGCTTTCCACTTATCCACTTAATGATCTTCTGCCTCAGC  2600
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCTAAGGTGATGGGGTTACAGGTGTGCTGTGCACTCAGCTACTAAAAT  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GCTTTTTATTACACTGTCCCATTTTTGTGAGTTGTACTTCTTATAGTTTC  2700
                                                        
seq2  --------------------------------------------------  0

seq1  CTTATCTGTAGCATTTCCTTACCTCTTTAAAGATTGCCTTAAACTTCCTG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTATTTTATTATTTTTGGTATCTAAAGTTGGACCCAAGTCCTTATAC  2800
                                                        
seq2  --------------------------------------------------  0

seq1  ATATTAATGCCTTTGTTCTACTCTGGATTTTATCCCAGCACAAATTTGCT  2850
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTTTTTTGGCTTGCTTGCTTGTTTGCTTGCTTGTTTTTTAAACAAACT  2900
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTCAGAACAGAGATACTATGTTTTATTTTTTTAATTGTGTGTCGAAT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  ATATATTTAATTATATGTGTGAGTTTAGGTGCCCATAGCTATAGGCTGTT  3000
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAGCTGCCCAGTGTGGGTGCTGGGAACTGAACTAAGGTTTTCTGCAAG  3050
                                                        
seq2  --------------------------------------------------  0

seq1  AGCAGAACATCTTATTAACACCCCAGCCATTTCTCCAGCCCCAAAACTAT  3100
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTTTTTCCTAGATTTATTTATTTATTATACACAAATGTTTTGCCTG  3150
                                                        
seq2  --------------------------------------------------  0

seq1  GATAAAAGCACTTGCTGATCCTACAGAGGACCTGAGTTTTGTTCTTTGCA  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CCTACATTGTGTGGTTCACAATAGCTTATAATTGTGGTTTTAGGAGATCC  3250
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGCCTTTTCTGGCCTCCTTGGGCACCTGCACATGTGTGCATATAGATA  3300
                                                        
seq2  --------------------------------------------------  0

seq1  AATAAAAACCTAAAAAAAGAACTATAGTAAGTAAATACTATGTTGTAAAA  3350
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCTCATCCAGCTGGGCAGTGGTGTGGGAAGCCTTTAATCCCAGCACTC  3400
                                                        
seq2  --------------------------------------------------  0

seq1  GGGAGGCAGGGGCAGGTGAAGCTTTTGTGAATTTGAGGCCAACTTGGTCT  3450
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAAGTGAGTTCCAGGACAGACAGGGCTGTTACATGGAGAAACCTTGTC  3500
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAAAAACAACAGAACAACAACAACAACAACAAAAAATACCTAAAAAAA  3550
                                                        
seq2  --------------------------------------------------  0

seq1  AGAACTATAGTAAGTAAATACCATGTTATGTCTCATCCAACCGGACAGTG  3600
                                                        
seq2  --------------------------------------------------  0

seq1  GTGGTGCATGCCTTTATTAATCCCAATACTTGGGAGTTAGAGGTAGGTAG  3650
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCTGTTTGAGGCCAGACTGGTCTACAGAGCGTTCTGACCTCAAGGAG  3700
                                                        
seq2  --------------------------------------------------  0

seq1  CTCATGTGCATATACCTACACAGGAGCTGAAGGGGTTTGCATGGCTCTAA  3750
                                             |    | | ||
seq2  ------------------------------------ACCCCCCCCCCCAA  14

seq1  CTGCATATGTAGCAGAGGATGGCTTTATCTGGCATCAGTGGGAGAAGAGG  3800
          | |   |  | ||||| || || |  | ||| | |||||  ||   
seq2  AAAAAAAAAAAAAAAAGGATAGCCTTGTTGGACATAAATGGGAAGAGCAA  64

seq1  CCCTTCCTTAGTCCTGTGAAGG----CTCTGTCCCACTGTAGGGGAATGC  3846
      ||||   | || ||   || ||    |  || |||  |||||||||||||
seq2  CCCT---TGAGCCC---GAGGGTGTTCGATGCCCCTGTGTAGGGGAATGC  108

seq1  CAGAATGGTGAGGTGGGAGTGGGTGGGTGGGTAAGCACTCTCATAGAAGC  3896
      ||| |  |  ||   |||||| ||||||||||                  
seq2  CAGGACAGGAAGACAGGAGTGAGTGGGTGGGT-----------------G  141

seq1  AGGGGGAGGGGAATAAGAGAGGGGGTTTGTGGAAGGGACACCCACTGGGA  3946
       | ||| || |||| ||  |||||||    |  |||||     |||||  
seq2  GGTGGGTGGAGAATCAGCTAGGGGGTCCCAG--AGGGA---AGACTGGAG  186

seq1  AAGGGATAACATTTGAAATGTAAATAAGATGGGCGTGGTGGTGCACACCT  3996
      |  |||||||||| |||||||||| ||               | | |  |
seq2  AGAGGATAACATTAGAAATGTAAACAA--------------AGAAAATAT  222

seq1  TTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGG  4046
        |||   || |                                      
seq2  CCAATAAAAGAAAA------------------------------------  236

seq1  CCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGA  4096
                                                        
seq2  --------------------------------------------------  236

seq1  AACCCTGTCTCGAACCCCCCCCCCCCAAAAAAAAAAAGAAATGTAAATAA  4146
                                                        
seq2  --------------------------------------------------  236

seq1  ATAAAATATCCAATAAAAAAAAA  4169
                             
seq2  -----------------------  236


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