BAC Information

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BAC

Clone NameB6Ng01-275O09
Chromosome3 (Build37)
Map Location 72,186,287 - 72,187,446
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385, LOC100041459
Downstream gene2010204N08Rik, Slitrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275O09.bB6Ng01-275O09.g
ACCGA076816GA076817
length9571,146
definitionB6Ng01-275O09.b B6Ng01-275O09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatctaccaaggctgctctggatacagctactgctgagtgccag
atatgccaatagcagagatcagcattaagccccagaaataaaaccatttt
acagggaccatctagcaacctaggggtaggttggcttcattggatcactt
ctatcatgaaaaggaccatgatttgactttatttgaataaacttttattc
caattatggattttcctttcttacatttagctttcttctaaacatacgat
ctgtagtggctattcctggttgtcaacttgactatatctggaatgaacta
gaatctagaattggaaggctcaccagtgatcctaatctggaggctgggag
atacaagttcctgacctggatattggcaaaaatattggaggcatagtggc
tatgaattccagaagattaagaaagggagatctcttgacttcaaggtcat
ctctgattaaaggtatggtgacacacacctttaatctggaccacatcttc
tgctggagacctacataaggacattagaagaaggaaaatttcctctttct
ctcattaggttgtttgccttgtgggactgagcaacggctagatccttgga
cttccattcacagctgctgctgaccattgttgggagttggacaatagatt
gaaagtcatcaacaaattcccttactatacagagactacccataagttct
gtgactctagagaaccctgactaataaaccatccatggacttttaaaatg
ccttatccacaattatggcctgacatgccacacaacattgcttctaactt
aagaactcactttcatatccagagaagtacaacagggggatcatgctctt
tccttgattctcatcatcacagagcagttggctgagtagactgacagaaa
ggccttctgaatatagttttgatgtagttacagcaacaattactattgag
ggctggg

gaattcacttgtgaaatggccctgccagatactactttttctttttgata
ttacaaataatgtatatgaaataagtctccagttgttttttttgttgttg
ttgttggattttttctgtttttcatcaatgtagaagaaaaacaccaaaat
attttcctcaaacattaaatgtcccataactgagacatttatataaataa
gaatataaaagaaacatcagaaaaatatacttaagattctcatgtgacag
aaaaactttccaagaagaaatccctagttaacataaaagtagtttattca
tgggcagtcagacagaacataattggagaatgatgagggctgtggtttaa
cagtcataaactagaagcaacattctaaggcctgttgccatgttcttggt
attcaatgaggtatttcttccctctgagggcagaggacctgtcacacaag
gctctagagaagtaagggtcaatataacctttccaagtttagttttgtgt
cttatttcagaaaagaagactcaaaggaaattaaaatattattcctgctt
ttaattttcaaattatctctattgtaaagtgtattatagcatgtctaact
atattcttggtaaatgttattttcttacatttatttaatttggatattat
ttgactttttgtttctataaactataattttttcacatttggaaatattc
agaaatcatttatttatttgatatattttgaattcctatggaaaaaatac
cttagaaaaataagaatttattttgtctaacagttttagagggctaagtt
catgttcatttggcctcatgtgctttggcagaataccagtgtaaaaagga
tgtgtgtgaaaaatgttgctgttcaccatatcagagaaaggaaagcagag
agaatccttaacagggaaagcctggacacagtatacatacaaagcaagtc
ttcatttttcccagttctttagctcataaattctattcaattttttatca
gtggagaagtcattcatgagttcatagtacttctgatctagctgtgtctg
caatacagtagagagccacccagtctgctctagcagtctctgggtactct
aaatcgattcgtatatagttcacgcctggcttcaaatacctttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72186287_72187446
seq2: B6Ng01-275O09.g_67_1212

seq1  GAATTCACTTGTGAAATGGCCCTGCCAGATACTACTTTTTCTTTTTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTGAAATGGCCCTGCCAGATACTACTTTTTCTTTTTGATA  50

seq1  TTACAAATAATGTATATGAAATAAGTCTCCAGTTGTTTTTTTTGTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATAATGTATATGAAATAAGTCTCCAGTTGTTTTTTTTGTTGTTG  100

seq1  TTGTTGGATTTTTTCTGTTTTTCATCAATGTAGAAGAAAAACACCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGATTTTTTCTGTTTTTCATCAATGTAGAAGAAAAACACCAAAAT  150

seq1  ATTTTCCTCAAACATTAAATGTCCCATAACTGAGACATTTATATAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCAAACATTAAATGTCCCATAACTGAGACATTTATATAAATAA  200

seq1  GAATATAAAAGAAACATCAGAAAAATATACTTAAGATTCTCATGTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAAAGAAACATCAGAAAAATATACTTAAGATTCTCATGTGACAG  250

seq1  AAAAACTTTCCAAGAAGAAATCCCTAGTTAACATAAAAGTAGTTTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTTCCAAGAAGAAATCCCTAGTTAACATAAAAGTAGTTTATTCA  300

seq1  TGGGCAGTCAGACAGAACATAATTGGAGAATGATGAGGGCTGTGGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTCAGACAGAACATAATTGGAGAATGATGAGGGCTGTGGTTTAA  350

seq1  CAGTCATAAACTAGAAGCAACATTCTAAGGCCTGTTGCCATGTTCTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATAAACTAGAAGCAACATTCTAAGGCCTGTTGCCATGTTCTTGGT  400

seq1  ATTCAATGAGGTATTTCTTCCCTCTGAGGGCAGAGGACCTGTCACACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGAGGTATTTCTTCCCTCTGAGGGCAGAGGACCTGTCACACAAG  450

seq1  GCTCTAGAGAAGTAAGGGTCAATATAACCTTTCCAAGTTTAGTTTTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGAGAAGTAAGGGTCAATATAACCTTTCCAAGTTTAGTTTTGTGT  500

seq1  CTTATTTCAGAAAAGAAGACTCAAAGGAAATTAAAATATTATTCCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCAGAAAAGAAGACTCAAAGGAAATTAAAATATTATTCCTGCTT  550

seq1  TTAATTTTCAAATTATCTCTATTGTAAAGTGTATTATAGCATGTCTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCAAATTATCTCTATTGTAAAGTGTATTATAGCATGTCTAACT  600

seq1  ATATTCTTGGTAAATGTTATTTTCTTACATTTATTTAATTTGGATATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTGGTAAATGTTATTTTCTTACATTTATTTAATTTGGATATTAT  650

seq1  TTGACTTTTTGTTTCTATAAACTATAATTTTTTCACATTTGGAAATATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTTGTTTCTATAAACTATAATTTTTTCACATTTGGAAATATTC  700

seq1  AGAAATCATTTATTTATTTGATATATTTTGAATTCCTATGGAAAAAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATTTATTTATTTGATATATTTTGAATTCCTATGGAAAAAATAC  750

seq1  CTTAGAAAAATAAGAATTTATTTTGTCTAACAGTTTTAGAGGGCTAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAAAATAAGAATTTATTTTGTCTAACAGTTTTAGAGGGCTAAGTT  800

seq1  CATGTTCATTTGGCCTCATGTGCTTTGGCAGAATACCAGTGTAAAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCATTTGGCCTCATGTGCTTTGGCAGAATACCAGTGTAAAAAGGA  850

seq1  TGTGTGTGAAAAATGTTGCTGTTCACCATATCAGAG-AAGGAAAGCAGAG  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGTGTGAAAAATGTTGCTGTTCACCATATCAGAGAAAGGAAAGCAGAG  900

seq1  AGAATCCTTAACA-GGAAAGCCTGGACACAGTATACATACAAAGCAAGTC  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTTAACAGGGAAAGCCTGGACACAGTATACATACAAAGCAAGTC  950

seq1  TTCATTTTTCCCAGTTCTTTTAGCTCATAAATTCTATTCAAATTTTTTAT  998
      ||||||||||||||||| ||||||||||||||||||||| ||||||||| 
seq2  TTCATTTTTCCCAGTTC-TTTAGCTCATAAATTCTATTC-AATTTTTTA-  997

seq1  TCAGTGGAGAAAGTCATTCATGAGTTCATAGTACTTCTGATCTAGCTGTG  1048
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGAG-AAGTCATTCATGAGTTCATAGTACTTCTGATCTAGCTGTG  1046

seq1  TCTGCAAATACCAGTAGAGAAGCACCCAGTCTTGCTCTAGCAGTCTCTTG  1098
      ||||| |||| |||||||||  ||||||||| ||||||||||||||| ||
seq2  TCTGC-AATA-CAGTAGAGAGCCACCCAGTC-TGCTCTAGCAGTCTC-TG  1092

seq1  GGTACTCTTAATCGATTTTACAGTTAATAATAGTCACCGCCCTTGCTTCA  1148
      |||||||| ||||||||     ||  ||| |  ||||   ||| ||||||
seq2  GGTACTCTAAATCGATT----CGTATATAGT--TCAC--GCCTGGCTTCA  1134

seq1  AATACTTTTCTG  1160
      ||||| ||||||
seq2  AATACCTTTCTG  1146


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