MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-276D12
Chromosome	3 (Build37)
Map Location	36,064,551 - 36,218,841
singlet/doublet	doublet
Overlap gene	D3Ertd254e, Gpr103
Upstream gene	LOC665655, Ube2l3-ps1, LOC625963, Atp11b, LOC665667, Dcun1d1, Mccc1, BC050811, Acad9
Downstream gene	Anxa5, 1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3, 4932438A13Rik, Tenr, LOC652987, Il2, Il21, Cetn4, Bbs12
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ube2l3-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26463 MGI:1347022
definition	gene_synonym : Ubce7-ps1; UbcM4 note : ubiquitin-conjugating enzyme E2L 3, pseudogene 1 pseudo : _no_value

name	LOC625963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	Atp11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76295 MGI:1923545
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Dcun1d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114893 MGI:2150386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mccc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72039 MGI:1919289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC050811 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241943 MGI:2681852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acad9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229211 MGI:1914272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D3Ertd254e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241944 MGI:1098769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 95 ESTs

name	Gpr103 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229214 MGI:2677633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anxa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11747 MGI:106008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810062G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72282 MGI:1919532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC665709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Exosc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50911 MGI:1355319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccna2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12428 MGI:108069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bbs7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71492 MGI:1918742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trpc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22065 MGI:109526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932438A13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229227 MGI:2444631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 117 ESTs, 4 Proteins

name	Tenr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21744 MGI:103258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC652987 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:652987
definition	note : zinc finger, CCHC domain containing 17 pseudogene pseudo : _no_value

name	Il2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16183 MGI:96548
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60505 MGI:1890474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cetn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207175 MGI:2677454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bbs12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241950 MGI:2686651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62632753 GeneID:76295 MGI:1923545
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Class VI, type 11B transcript_id : NM_029570.3

name	Dcun1d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86476043 GeneID:114893 MGI:2150386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) transcript_id : NM_033623.5

name	Mccc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366519 GeneID:72039 MGI:1919289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) transcript_id : NM_023644.3

name	BC050811 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803163 GeneID:241943 MGI:2681852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC050811 transcript_id : NM_178418.3

name	Acad9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100817932 GeneID:229211 MGI:1914272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-Coenzyme A dehydrogenase family, member 9 transcript_id : NM_172678.3

name	D3Ertd254e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250848 GeneID:241944 MGI:1098769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 95 ESTs product : DNA segment, Chr 3, ERATO Doi 254, expressed transcript_id : XM_001475091.1

name	Gpr103 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67514557 GeneID:229214 MGI:2677633
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 103 transcript_id : NM_198192.2

name	Anxa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753059 GeneID:11747 MGI:106008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : annexin A5 transcript_id : NM_009673.1

name	1810062G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250850 GeneID:72282 MGI:1919532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 1810062G17 gene transcript_id : XM_001475130.1

name	Exosc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053920 GeneID:50911 MGI:1355319
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exosome component 9 transcript_id : NM_019393.2

name	Ccna2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753307 GeneID:12428 MGI:108069
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin A2 transcript_id : NM_009828.1

name	Bbs7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352247 GeneID:71492 MGI:1918742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bardet-Biedl syndrome 7 transcript_id : NM_027810.2

name	Trpc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507206 GeneID:22065 MGI:109526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 3 transcript_id : NM_019510.1

name	4932438A13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250852 GeneID:229227 MGI:2444631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 117 ESTs, 4 Proteins product : RIKEN cDNA 4932438A13 gene transcript_id : XM_001475233.1

name	Tenr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361280 GeneID:21744 MGI:103258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis nuclear RNA binding protein transcript_id : NM_009350.2

name	Il2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982837 GeneID:16183 MGI:96548
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 2 transcript_id : NM_008366.2

name	Il21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130431 GeneID:60505 MGI:1890474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 21 transcript_id : NM_021782.2

name	Cetn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891791 GeneID:207175 MGI:2677454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrin 4 transcript_id : NM_145825.2

name	Bbs12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922639 GeneID:241950 MGI:2686651
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bardet-Biedl syndrome 12 (human) transcript_id : NM_001008502.2

name	Atp11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62632754 GeneID:76295 MGI:1923545
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : ATPase, Class VI, type 11B protein_id : NP_083846.2

name	Dcun1d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86476044 CCDS:CCDS17306.1 GeneID:114893 MGI:2150386
definition	codon_start : 1 product : testis derived transcript 3 protein_id : NP_296372.3

name	Mccc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980706 CCDS:CCDS17307.1 GeneID:72039 MGI:1919289
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005759 - mitochondrial matrix [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence ISS] [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004485 - methylcrotonoyl-CoA carboxylase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006768 - biotin metabolism [Evidence ISS]; GO:0006552 - leucine catabolism [Evidence ISS] [Evidence TAS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) protein_id : NP_076133.2

name	BC050811 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410752 GeneID:241943 MGI:2681852
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC241943 protein_id : NP_848505.1

name	Acad9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:100817933 CCDS:CCDS17310.1 GeneID:229211 MGI:1914272
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : very-long-chain acyl-CoA dehydrogenase VLCAD homolog protein_id : NP_766266.3

name	D3Ertd254e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250849 GeneID:241944 MGI:1098769
definition	codon_start : 1 product : similar to Zinc finger protein 43 protein_id : XP_001475141.1

name	Gpr103 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38016146 CCDS:CCDS17311.1 GeneID:229214 MGI:2677633
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : QRFP receptor product : G protein-coupled receptor 103 protein_id : NP_937835.1

name	Anxa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753060 GeneID:11747 MGI:106008
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0050819 - negative regulation of coagulation [Evidence IEA] codon_start : 1 note : annexin V product : annexin A5 protein_id : NP_033803.1

name	1810062G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250851 GeneID:72282 MGI:1919532
definition	codon_start : 1 product : hypothetical protein LOC72282 protein_id : XP_001475180.1

name	Exosc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506981 CCDS:CCDS17312.1 GeneID:50911 MGI:1355319
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005730 - nucleolus [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006396 - RNA processing [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 note : polymyositis/scleroderma autoantigen 1 product : exosome component 9 protein_id : NP_062266.1

name	Ccna2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753308 CCDS:CCDS17313.1 GeneID:12428 MGI:108069
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001939 - female pronucleus [Evidence IDA]; GO:0001940 - male pronucleus [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence IMP] [Evidence IGI]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin A2 protein_id : NP_033958.1

name	Bbs7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27597063 CCDS:CCDS17314.1 GeneID:71492 MGI:1918742
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Bardet-Biedl syndrome 7 protein_id : NP_082086.1

name	Trpc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507207 GeneID:22065 MGI:109526
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : receptor-activated cation channel TRP3; transient receptor protein 3 product : transient receptor potential cation channel, subfamily C, member 3 protein_id : NP_062383.1

name	4932438A13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250853 GeneID:229227 MGI:2444631
definition	codon_start : 1 product : hypothetical protein LOC229227 protein_id : XP_001475283.1

name	Tenr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678283 CCDS:CCDS17315.1 GeneID:21744 MGI:103258
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003725 - double-stranded RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : testis nuclear RNA binding protein protein_id : NP_033376.1

name	Il2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110653 CCDS:CCDS17316.1 GeneID:16183 MGI:96548
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence ISS] [Evidence IDA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005134 - interleukin-2 receptor binding [Evidence ISS] [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0050728 - negative regulation of inflammatory response [Evidence IMP]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence IMP] [Evidence IDA] [Evidence ISS]; GO:0051024 - positive regulation of immunoglobulin secretion [Evidence IMP]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042523 - positive regulation of tyrosine phosphorylation of Stat5 protein [Evidence IDA] codon_start : 1 note : interleukin-2 product : interleukin 2 protein_id : NP_032392.1

name	Il21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11140821 CCDS:CCDS17317.1 GeneID:60505 MGI:1890474
definition	GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IDA] GO_process : GO:0001783 - B cell apoptosis [Evidence NAS]; GO:0045579 - positive regulation of B cell differentiation [Evidence NAS] codon_start : 1 product : interleukin 21 protein_id : NP_068554.1

name	Cetn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003866 CCDS:CCDS17318.1 GeneID:207175 MGI:2677454
definition	GO_component : GO:0005932 - basal body [Evidence IDA]; GO:0005814 - centriole [Evidence IDA]; GO:0009288 - flagellum (sensu Bacteria) [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA] [Evidence IDA]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0001539 - ciliary or flagellar motility [Evidence IEA] codon_start : 1 product : centrin 4 protein_id : NP_665824.1

name	Bbs12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922640 GeneID:241950 MGI:2686651
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : Bardet-Biedl syndrome 12 protein_id : NP_001008502.2

name	LOC665655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665655
definition	number : 1 pseudo : _no_value

name	LOC665667 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665667
definition	number : 1 pseudo : _no_value

name	LOC665667 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665667
definition	number : 2 pseudo : _no_value

name	LOC665709 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665709
definition	number : 1 pseudo : _no_value

name	LOC625963 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250888 GeneID:625963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : hypothetical protein LOC625963 transcript_id : XR_032468.1

clone name	MSMg01-527O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-444D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-168K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-474H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536E12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-173L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-276D12.b	B6Ng01-276D12.g
ACC	GA077054	GA077055
length	1,163	1,069
definition	B6Ng01-276D12.b	B6Ng01-276D12.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(36,064,551 - 36,065,501)	(36,217,790 - 36,218,841)
sequence	gaattcacactggagagaggccctaccattgtaaagactgtggcaaaact tttaataaaaagtcaagccttactcaacaccagagaatccatactggaga gaagccctattcttgtaaagactgtggcaaagcttttaatcaaagatcaa gcctcagcctacaccagagaggccatactggggagaaacccaataaatgt aatgaatgtggcaaagcctttaaccgtgtatttttccttactcaacatca gaaaattcatactggagagaaggcttaccactgtaaagactgtggcaaag catttaagcagaggtccagccttactcagcaccagagggtacacactgga gacaagccctatcattgtaagcactgtggcaaagcttttacccagaggtc cagctttacacgacaccagaggatccacactggagagaagccctacaagt gtcaagactgtgacaaagccttcagccggaacttacttctcattcaacac cagagaattcacacaggagagaagccttaccattgtcaagattgtggcag agcgtttaatcaaaggtcaagccttactcaacatcagagggttcacactg gggacaagcccttctgctgtaaagactgtggcaaggcttttacccagagg tcaagctttaatcgacaccagagagttcatactggagagaagccctacaa atgtaaagagtgtgatggcgcctttaaatccagttcccaccttgccgaac accagtgcacctcattaggcagctgctttgaagacacaaaatttctccaa tatatatgagtttattgttctgttacagccagttagcaaacaccgatgga tttatcttgaaaacaagtaacatgtttgattatacaaaaggtactttctg ttgcaatacctaactggatttccggagccatatcctggtttaattaagta ataatatttttctttcttgtcattttgtcaccgggtctgtgtaatagttg tattctcagatgtatttcccaaactttgtcagactgtatacataacatac accacctggggggctggtgagatgggctcagtgggttaagagcaacccgg actgctctcgagtcaggagctcaatccagcacacatggtggctccaaccc aattcggaatgag	gaattcttctgaaatgttttgagcaatgacattttagaactgattctttt agagtgttttaaagtatgctgtatgttcaatgtcaagaggaaagataaat aatagaaaacgaaagagaacgctgcttctgcttttttgtttatttaaaga cggagtaatgggtagggagggagatggctcagtgcttactgtgcaagagt gagggacctgagttttaatctctagaacccacataaagccaggcacagta gtgtgtctataattgcagtattcctatggtaaaatgagaggcagagcaaa gaggatcagtggacactcgtgcccagatagcctggtgtatgactgaggga caacagagagaccctgtcttagaaaagctaaatggtgaggatagacaccc acatttgtcttctgacttccatatgtatccctgcattcagacacatgtgt gcacacacacaggtgctcacgcatgcatgctatacatatacatatcatac atacacatccatacacacgcatgcatgcttgcacacatgtatatatgcac acaatatgctatatatatgcatatatatacatatatatgtatatacacac atcacatacacacaaataaaaaattaaactggtaatatttaattgcacag atgcaccaaaaaatcttcatttactcatctgtgattgtttgaatgcagtg gcttctgggtctactattagcacataaatttaatttcctttagatacgtg gccaaactagttttacattttttgagaagcttctatatagttttccatac tggcaggagttgtatccatgtaaccaacaagatacaagtgaacctatgtc tgcatcctgaccaacactgggtctcttttgtgacttttgataatagctat tctaacaggttaagaggtcttgctgtggttcatttacattttcttagtga tacttaaaggagtggtagcacctttttttatataacctggtcagcttatt tggtctttaaattttaattatcttctggagattggtaggtataattacat tcattttccccctttcact
quality values	Open. Hide. 41 14 28 39 58 32 15 52 33 54 62 49 62 47 41 47 47 54 54 54 51 62 62 62 62 62 47 47 62 62 26 11 11 15 21 18 21 21 22 28 18 23 24 39 43 51 56 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 34 34 49 39 45 40 34 34 54 36 43 40 46 56 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 42 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 47 54 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 56 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 58 58 54 58 58 58 58 54 58 58 58 58 42 35 58 58 58 58 58 58 58 58 58 58 54 54 58 54 58 58 58 58 49 58 54 49 45 58 58 58 58 58 54 58 54 58 46 58 58 58 58 54 58 58 58 58 52 58 58 54 58 58 58 49 58 58 58 58 58 58 51 58 58 58 42 58 58 51 58 58 51 53 51 33 58 46 53 58 53 52 51 58 58 58 58 58 58 58 35 42 49 58 50 48 43 43 51 51 51 58 58 53 58 58 52 58 58 58 50 58 40 58 58 53 51 58 50 54 49 41 58 50 58 58 58 44 37 41 58 49 52 53 41 29 58 53 40 53 58 50 52 51 58 51 50 40 51 53 52 58 52 50 51 49 35 52 58 33 47 40 49 38 39 40 52 42 52 51 54 54 51 29 53 37 54 51 19 44 46 54 49 40 40 29 39 31 41 54 38 37 54 35 53 54 39 53 54 37 49 34 32 54 54 36 44 51 52 37 54 47 45 54 45 43 32 37 31 44 33 53 29 54 34 29 41 51 53 53 52 45 51 19 53 52 32 29 31 42 34 29 32 47 32 32 32 32 41 32 30 41 53 32 21 47 31 32 32 45 39 45 42 41 51 51 32 53 53 33 53 30 31 35 31 51 51 31 31 51 46 51 45 33 30 28 42 30 37 31 31 38 39 45 31 51 16 33 51 22 30 18 51 46 33 31 42 31 51 37 42 23 31 35 38 42 43 25 30 46 43 31 29 42 33 42 33 30 31 31 38 32 36 36 31 46 14 15 47 42 31 31 42 41 42 31 32 46 41 37 31 16 27 31 34 30 32 26 29 32 39 35 47 36 31 36 27 31 30 31 29 32 15 46 46 16 13 16 26 31 32 38 48 24 31 31 37 29 24 31 33 18 22 35 28 31 38 31 31 23 26 31 26 31 9 17 47 20 18 15 12 17 31 19 38 31 19 31 31 31 20 26 21 31 24 12 47 20 19 26 6 23 4 21 25 32 24 28 32 25 26 30 32 37 48 48 48 21 20 29 48 32 23 18 17 20 19 34 24 32 47 43 28 17 25 17 43 11 24 10 43 7 16 28 19 17 8 4 9 3 5 28 28 28 21 18 24 12 28 28 20 29 17 15 19 14 16 15 16 7 10 28 47 28 19 47 28 21 38 24 11 16 47 22 10 11 5 15 13 28 13 13 19 14 15 16 13 24 24 17 3 5 3 14 19 6 7 5 5 9 7 7 7 6 23 30 30 28 30 17 12 12 17 5 9 15 20 6 25 8 8 25 10 15 16 15 13 4 4 10 26 19 4 7 25 21 5 11 4 3 6 8 18 18 16 4 4 23 16 6 8 7 4 2 3 3 3 3 5 3 5 3 6 5 14 2 1 3 12 17 17 6 10 17 9 8 12 13 5 1 6 4 4 12 14 5 22 17 6 9 5 6 1 7 5 25 9 5 5 18 7 15 4 3 5 6 4 3 3 3	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr3_36064551_36065501
seq2: B6Ng01-276D12.b_263_1208

seq1  CTTTAACCGTGTATTTTTCCTTACTCAACATCAGAAAATTCATACTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACCGTGTATTTTTCCTTACTCAACATCAGAAAATTCATACTGGAG  50

seq1  AGAAGGCTTACCACTGTAAAGACTGTGGCAAAGCATTTAAGCAGAGGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTTACCACTGTAAAGACTGTGGCAAAGCATTTAAGCAGAGGTCC  100

seq1  AGCCTTACTCAGCACCAGAGGGTACACACTGGAGACAAGCCCTATCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACTCAGCACCAGAGGGTACACACTGGAGACAAGCCCTATCATTG  150

seq1  TAAGCACTGTGGCAAAGCTTTTACCCAGAGGTCCAGCTTTACACGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACTGTGGCAAAGCTTTTACCCAGAGGTCCAGCTTTACACGACACC  200

seq1  AGAGGATCCACACTGGAGAGAAGCCCTACAAGTGTCAAGACTGTGACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATCCACACTGGAGAGAAGCCCTACAAGTGTCAAGACTGTGACAAA  250

seq1  GCCTTCAGCCGGAACTTACTTCTCATTCAACACCAGAGAATTCACACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAGCCGGAACTTACTTCTCATTCAACACCAGAGAATTCACACAGG  300

seq1  AGAGAAGCCTTACCATTGTCAAGATTGTGGCAGAGCGTTTAATCAAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCTTACCATTGTCAAGATTGTGGCAGAGCGTTTAATCAAAGGT  350

seq1  CAAGCCTTACTCAACATCAGAGGGTTCACACTGGGGACAAGCCCTTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTACTCAACATCAGAGGGTTCACACTGGGGACAAGCCCTTCTGC  400

seq1  TGTAAAGACTGTGGCAAGGCTTTTACCCAGAGGTCAAGCTTTAATCGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGACTGTGGCAAGGCTTTTACCCAGAGGTCAAGCTTTAATCGACA  450

seq1  CCAGAGAGTTCATACTGGAGAGAAGCCCTACAAATGTAAAGAGTGTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGTTCATACTGGAGAGAAGCCCTACAAATGTAAAGAGTGTGATG  500

seq1  GCGCCTTTAAATCCAGTTCCCACCTTGCCGAACACCAGTGCACCTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTTTAAATCCAGTTCCCACCTTGCCGAACACCAGTGCACCTCATTA  550

seq1  GGCAGCTGCTTTGAAGACACAAAATTTCTCCAATATATATGAGTTTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTGCTTTGAAGACACAAAATTTCTCCAATATATATGAGTTTATTG  600

seq1  TTCTGTTACAGCCAGTTAGCAAACACCGATGGATTTATCTTGAAAACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTACAGCCAGTTAGCAAACACCGATGGATTTATCTTGAAAACAAG  650

seq1  TAACATGTTTGATTATACAAAAGGTACTTTCTGTTGCAATACCTAACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGTTTGATTATACAAAAGGTACTTTCTGTTGCAATACCTAACTGG  700

seq1  ATTTCCGGAGCCATATCCTGGTTTAATTAAGTAATAATATTTTTCTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCGGAGCCATATCCTGGTTTAATTAAGTAATAATATTTTTCTTTCT  750

seq1  TGTCATTTTGTCAACCGGTTCTGTGTTAATAGTTGTATTCTCAGATGTAT  800
      |||||||||||| ||||| |||||| ||||||||||||||||||||||||
seq2  TGTCATTTTGTC-ACCGGGTCTGTG-TAATAGTTGTATTCTCAGATGTAT  798

seq1  TTCCCAAACTTTGTTCAGACTGTATACATAAAACATACA-CAC--TGGGG  847
      ||||||||||||| |||||||||||||||  |||||||| |||   ||||
seq2  TTCCCAAACTTTG-TCAGACTGTATACAT--AACATACACCACCTGGGGG  845

seq1  GCTGGTGAGAT-GGCTCAGTGGG-TAAGAGCA--CCCGACTGCTCTTCCG  893
      ||||||||||| ||||||||||| ||||||||  || |||||||||  ||
seq2  GCTGGTGAGATGGGCTCAGTGGGTTAAGAGCAACCCGGACTGCTCT--CG  893

seq1  AAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC--AT  941
      |  |||  ||| ||||   ||||||  ||||||||||||| |||||  ||
seq2  A--GTCAGGAGCTCAA--TCCAGCA--CACATGGTGGCTC-CAACCCAAT  936

seq1  TCGAAATGAG  951
      ||| ||||||
seq2  TCGGAATGAG  946

seq1: chr3_36217790_36218841
seq2: B6Ng01-276D12.g_66_1134 (reverse)

seq1  AGTGAAAGGGG--AAATG-ATGTAATTATA-CTA-CAATCTCAAG-AGAT  44
      |||||||||||  ||||| ||||||||||| ||| ||||||| || ||||
seq2  AGTGAAAGGGGGAAAATGAATGTAATTATACCTACCAATCTCCAGAAGAT  50

seq1  AATTAAAAATT-AAGA-CAAAT-AGCTGAC--AGTTATATAAAAAAAGGT  89
      |||||||| || |||| ||||| |||||||   |||||||||||||||||
seq2  AATTAAAATTTAAAGACCAAATAAGCTGACCAGGTTATATAAAAAAAGGT  100

seq1  GCTA-CACT-CTTTAAGTATCACTAAGAAAATGTAAATG-ACCACAGCAA  136
      |||| |||| ||||||||||||||||||||||||||||| ||||||||||
seq2  GCTACCACTCCTTTAAGTATCACTAAGAAAATGTAAATGAACCACAGCAA  150

seq1  GACCTCTT-ACCTGTTAGAATAGCTATTATC-AAAGTCACAAAAGAGA-C  183
      |||||||| |||||||||||||||||||||| |||||||||||||||| |
seq2  GACCTCTTAACCTGTTAGAATAGCTATTATCAAAAGTCACAAAAGAGACC  200

seq1  CAGTGTTGGTCAGGATGCAGACATAGGTTCACTTGTATCTTGTTGGTTAC  233
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTGGTCAGGATGCAGACATAGGTTCACTTGTATCTTGTTGGTTAC  250

seq1  ATGGATACAACTCCTGCCAGTATGGAAAACTATATAGAAGCTTCTCAAAA  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACAACTCCTGCCAGTATGGAAAACTATATAGAAGCTTCTCAAAA  300

seq1  AATGTAAAACTAGTTTGGCCACGTATCTAAAGGAAATTAAATTTATGTGC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAACTAGTTTGGCCACGTATCTAAAGGAAATTAAATTTATGTGC  350

seq1  TAATAGTAGACCCAGAAGCCACTGCATTCAAACAATCACAGATGAGTAAA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTAGACCCAGAAGCCACTGCATTCAAACAATCACAGATGAGTAAA  400

seq1  TGAAGATTTTTTGGTGCATCTGTGCAATTAAATATTACCAGTTTAATTTT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTTTTGGTGCATCTGTGCAATTAAATATTACCAGTTTAATTTT  450

seq1  TTATTTGTGTGTATGTGATGTGTGTATATACATATATATGTATATATATG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTGTGTATGTGATGTGTGTATATACATATATATGTATATATATG  500

seq1  CATATATATAGCATATTGTGTGCATATATACATGTGTGCAAGCATGCATG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATAGCATATTGTGTGCATATATACATGTGTGCAAGCATGCATG  550

seq1  CGTGTGTATGGATGTGTATGTATGATATGTATATGTATAGCATGCATGCG  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTATGGATGTGTATGTATGATATGTATATGTATAGCATGCATGCG  600

seq1  TGAGCACCTGTGTGTGTGCACACATGTGTCTGAATGCAGGGATACATATG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCTGTGTGTGTGCACACATGTGTCTGAATGCAGGGATACATATG  650

seq1  GAAGTCAGAAGACAAATGTGGGTGTCTATCCTCACCATTTAGCTTTTCTA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAAGACAAATGTGGGTGTCTATCCTCACCATTTAGCTTTTCTA  700

seq1  AGACAGGGTCTCTCTGTTGTCCCTCAGTCATACACCAGGCTATCTGGGCA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTCTCTCTGTTGTCCCTCAGTCATACACCAGGCTATCTGGGCA  750

seq1  CGAGTGTCCACTGATCCTCTTTGCTCTGCCTCTCATTTTACCATAGGAAT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGTCCACTGATCCTCTTTGCTCTGCCTCTCATTTTACCATAGGAAT  800

seq1  ACTGCAATTATAGACACACTACTGTGCCTGGCTTTATGTGGGTTCTAGAG  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAATTATAGACACACTACTGTGCCTGGCTTTATGTGGGTTCTAGAG  850

seq1  ATTAAAACTCAGGTCCCTCACTCTTGCACAGTAAGCACTGAGCCATCTCC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACTCAGGTCCCTCACTCTTGCACAGTAAGCACTGAGCCATCTCC  900

seq1  CTCCCTACCCATTACTCCGTCTTTAAATAAACAAAAAAGCAGAAGCAGCG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTACCCATTACTCCGTCTTTAAATAAACAAAAAAGCAGAAGCAGCG  950

seq1  TTCTCTTTCGTTTTCTATTATTTATCTTTCCTCTTGACATTGAACATACA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCGTTTTCTATTATTTATCTTTCCTCTTGACATTGAACATACA  1000

seq1  GCATACTTTAAAACACTCTAAAAGAATCAGTTCTAAAATGTCATTGCTCA  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTTTAAAACACTCTAAAAGAATCAGTTCTAAAATGTCATTGCTCA  1050

seq1  AAACATTTCAGAAGAATTC  1052
      |||||||||||||||||||
seq2  AAACATTTCAGAAGAATTC  1069

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information