BAC Information

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BAC

Clone NameB6Ng01-276L07
Chromosome3 (Build37)
Map Location 26,997,997 - 26,999,139
singlet/doubletsinglet
Overlap geneEct2
Upstream geneNlgn1, LOC229152, Spata16, LOC665258
Downstream geneAadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b, E030011K20Rik, Pld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276L07.bB6Ng01-276L07.g
ACCGA077421GA077422
length1,1451,160
definitionB6Ng01-276L07.b B6Ng01-276L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattttaaagataagtgtgagtgtgagtatgtgtgtgctatgt
catatgggccctgggaaccaaacttgggtactctgaaagagcaggaaatg
tttgtaactgctgagcccccttctccagacccctcttcttaatttttaaa
gcaaaattagagaggataaaaatgacatcatggaaataatctaaaattaa
gtcatatattcccagagtgttgtattaattatatgcccaactactatatg
tataggtgtgcattctcatgggtgtatatttcactccacatgaaaaccga
acagaactgcagcattctaagtaacaataattattaaattgctgagcaat
ctaaacttattctttcaaaggtcaaagttaatcatcgttagaatcttaaa
ctacgcccaaaacacgcagaagcttaaagcccaagagtgggtataatcaa
gataaactaaaagtctacctttttaaaatgcatataaacagctaactata
tctaaactcagggcttgtaagctaacgggctctgtccccatccaggcgag
taaaagcactaaaacacttgcactcaagtgatacaagggcttccacagga
actcctccccgggcagaggtctgatttactagaaaaggccacaatggacg
tacaccactagaataccattctcctttagatgatccttctcctaagagaa
attttgtaaaaacctgcttcttgtgaacttaatttttgtaaaaccatctt
tatttggcaatatgcaaaacctatttaacctaacttactatcaattcaaa
gcaacagtaaagttgtgaattcagaagaccaaacccacagaaagagattg
gatctagaaagtgttttcttttcttctataaatacaatgagctcccatta
aacttcatgagacttgtctccattactgtttgccatagctcctaattctt
cacaaatgtcagtgttgactaacgggttttttttttttgttttgtttttt
tgaaatttggaaaagaaaagacatacgtaactttctctaggtattctaag
cccctagctggggaggcaggacggtgccctaagcaatctaaaaactgact
tggcagactgttcagaaaacaacgttaagtacgtgccggacttcg
gaattcttgggccttaccccctgaccaaggaaagtagagaattcaaatgg
atatcagaacatcagagagcctttgaaaatattaaggaggccctgttgac
ttcgccagccttggcattgccagatctaaccaaacccttcatcctctatg
ttgatgagagggcggggttggccagaggagttcttactcaggctctaagg
ccgtggaagaggcccatggcatatttttctaagaagctggacccagtggc
cagcggatggcccacatgtttaaaggccattgctgcagtagccttactca
gtaaggatgccaacaaattaactttgggacagcaaataactgtggtagcc
ccccactctcttgaaagcattatctgccagcccccagattgatagatgac
aaatgcccagatgacccattaccagagtctgttgctgactaaacgggtcg
tgtttgctcctcctgctatcctcaatcctgctaccctcctgcctgaaacg
gacgattcctcgcccgttcactgctgtgtggacatccttgaagaagaaac
caggatccaaagtgatctatgagaccagccgtggccaagcattccaaact
ggtacacagatggaagcagcttcctagtagaagtttttatagataccttt
tcgggataggtggaggcctacccaacgaaaaaagaaactgccaatgttgt
gttaagaagatcctagaagaaatttttccatggttcagaatacctaagta
ataggctcttacacaggacctgcctttgttgcccaggtaagtcaggactg
gacatccaactggggattgagtagaaattacattgtggtcaatggccttt
ctctacacaaagaataaacaggctgagaaagaaattagggaaacacaccc
ttctcaatagtcatagtatgactctactacgaagtgaagatcttgtatga
taagaccttcagtcttctgaagaaataagaagatcctcagatgatggaag
atctcccatgcctcatggaagtggcagatcaacatgtaaaatgccttata
tgccgagcaatctacgatcaatgccaatcccatcaattcagctaattctc
aatggatgaggcatctgcaattccctctggataacaacctcagggatgcg
caaacacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26997997_26999139
seq2: B6Ng01-276L07.b_46_1190

seq1  GAATTCTTATTTTAAAGATAAGTGTGAGTGTGAGTATGTGTGTGCTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTTAAAGATAAGTGTGAGTGTGAGTATGTGTGTGCTATGT  50

seq1  CATATGGGCCCTGGGAACCAAACTTGGGTACTCTGAAAGAGCAGGAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGCCCTGGGAACCAAACTTGGGTACTCTGAAAGAGCAGGAAATG  100

seq1  TTTGTAACTGCTGAGCCCCCTTCTCCAGACCCCTCTTCTTAATTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACTGCTGAGCCCCCTTCTCCAGACCCCTCTTCTTAATTTTTAAA  150

seq1  GCAAAATTAGAGAGGATAAAAATGACATCATGGAAATAATCTAAAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATTAGAGAGGATAAAAATGACATCATGGAAATAATCTAAAATTAA  200

seq1  GTCATATATTCCCAGAGTGTTGTATTAATTATATGCCCAACTACTATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATATTCCCAGAGTGTTGTATTAATTATATGCCCAACTACTATATG  250

seq1  TATAGGTGTGCATTCTCATGGGTGTATATTTCACTCCACATGAAAACCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGTGCATTCTCATGGGTGTATATTTCACTCCACATGAAAACCGA  300

seq1  ACAGAACTGCAGCATTCTAAGTAACAATAATTATTAAATTGCTGAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTGCAGCATTCTAAGTAACAATAATTATTAAATTGCTGAGCAAT  350

seq1  CTAAACTTATTCTTTCAAAGGTCAAAGTTAATCATCGTTAGAATCTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTATTCTTTCAAAGGTCAAAGTTAATCATCGTTAGAATCTTAAA  400

seq1  CTACGCCCAAAACACGCAGAAGCTTAAAGCCCAAGAGTGGGTATAATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCCCAAAACACGCAGAAGCTTAAAGCCCAAGAGTGGGTATAATCAA  450

seq1  GATAAACTAAAAGTCTACCTTTTTAAAATGCATATAAACAGCTAACTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACTAAAAGTCTACCTTTTTAAAATGCATATAAACAGCTAACTATA  500

seq1  TCTAAACTCAGGGCTTGTAAGCTAACGGGCTCTGTCCCCATCCAGGCGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTCAGGGCTTGTAAGCTAACGGGCTCTGTCCCCATCCAGGCGAG  550

seq1  TAAAAGCACTAAAACACTTGCACTCAAGTGATACAAGGGCTTCCACAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCACTAAAACACTTGCACTCAAGTGATACAAGGGCTTCCACAGGA  600

seq1  ACTCCTCCCCGGGCAGAGGTCTGATTTACTAGAAAAGGCCACAATGGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCCCGGGCAGAGGTCTGATTTACTAGAAAAGGCCACAATGGACG  650

seq1  TACACCACTAGAATACCATTCTCCTTTAGATGATCCTTCTCCTAAGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCACTAGAATACCATTCTCCTTTAGATGATCCTTCTCCTAAGAGAA  700

seq1  ATTTTGTAAAAACCTGCTTCTTGTGAACTTAATTTTTGTAAAACCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAAAAACCTGCTTCTTGTGAACTTAATTTTTGTAAAACCATCTT  750

seq1  TATTTGGCAATATGCAAAACCTATTTAACCTAACTTACTATCAATTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCAATATGCAAAACCTATTTAACCTAACTTACTATCAATTCAAA  800

seq1  GCAACAGTAAAGTTGTGAATTCAGAAGACCAAACCCACAGAAAGAGATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGTAAAGTTGTGAATTCAGAAGACCAAACCCACAGAAAGAGATTG  850

seq1  GATCTAGAAAGTGTTTTCTTTTCTTCTATAAATACAATGAGCTCCCATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGAAAGTGTTTTCTTTTCTTCTATAAATACAATGAGCTCCCATTA  900

seq1  AACTTCATGAGACTTGTCTCCATTACTGTTTGCCATAGCTCCTAATTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATGAGACTTGTCTCCATTACTGTTTGCCATAGCTCCTAATTCTT  950

seq1  CACAAATGTCAGTGTTGACTAACGGGTTTTTTTTTTTTGTTTTGTTTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGTCAGTGTTGACTAACGGGTTTTTTTTTTTTGTTTTGTTTTTT  1000

seq1  TGAAATTTGGAAAAGAAAAGACAATACGTAACTTTCCTCTAGTAATTCTA  1050
      |||||||||||||||||||||| |||||||||||| ||||||  ||||| 
seq2  TGAAATTTGGAAAAGAAAAGAC-ATACGTAACTTT-CTCTAGGTATTCT-  1047

seq1  AAGCCCCTAGCTGGGGAGGCAGGACGGTGCCTTAAGCATTCT-AAAACTG  1099
      ||||||||||||||||||||||||||||||| |||||| ||| |||||||
seq2  AAGCCCCTAGCTGGGGAGGCAGGACGGTGCCCTAAGCAATCTAAAAACTG  1097

seq1  AATT-GCAGACTGTTCAG-AAACA--CTTAAGTATGTGCCCGACTTCG  1143
      | || ||||||||||||| |||||   ||||||| ||||| |||||||
seq2  ACTTGGCAGACTGTTCAGAAAACAACGTTAAGTACGTGCCGGACTTCG  1145