BAC Information

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BAC

Clone NameB6Ng01-276M01
Chromosome3 (Build37)
Map Location 29,601,739 - 29,671,349
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527, 6130401L20Rik
Downstream geneLOC100040676, Evi1, Mds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276M01.bB6Ng01-276M01.g
ACCGA077453GA077454
length1,163453
definitionB6Ng01-276M01.b B6Ng01-276M01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,670,198 - 29,671,349)(29,601,739 - 29,602,193)
sequence
gaattctcagaagtagggatcagtgcctggctgcttggacacacattttt
caacacttaattattctgatagtagtttataattttctagaatgtaagca
atcttctcttaaaaatcttaaggaatcagatcatgtgttagtatttctat
tagcatgtaatgtattgttttcctctctagaacagtgcatatactatgtc
ttccactgtgtttctagaatttaacacagaaataggcagatagtagtttc
tatcttattgagccatcaaataatacttgaacaaaataggaacaaatgat
aaagcaatggtaagctgtggtgatatctcaaaatacagaatgactatttg
aaatttcatatacaggaattttgattcctcatatagaactaagtgaccac
tgtccctgtaatgtccctgacaccctcaccatggttgttataatgctaca
tagaagtctgtattgcaagtgagcacagagatgctcacagatatctggga
gcattttcactggcccagtctttttaagactttgtaatattttatatcaa
gctgattagcccttattttcactttcatgtttcatacacattcatagctg
tggctactgtagcaataaatgtccgatccctgtctttaaatatttacatg
atctcctctgatctgtttcaacaccacaaagccaggcatttatgtcacag
tcctgaactagacatttcatgaaatatttattcttgctcagaggtgcaat
ccttgcttatattagcgtacagctttcattttgagatattaagcaatttc
atgagagaacaatatttttgaccaaatagtatgaacaatagaagagtctg
attataccagaccctgaatatattcctcctggtataatgtatataaattg
agagcttaagtgacaaattttgacttagtttcttcatgtttacgaataga
tcagagactccatgcttacagagaattctcatagacatgtgtgctttaaa
acaccctgggctttaccttgttcacaagaagttgccataagaaaccctga
tgggcaaacaccactgcccactttactaaggtttacacttgactccaatt
ctgggcagtcaacagaatatggaacaccattaaagccaattgaattccga
ggacattctagaa
gaattcagatccttgtgctcatgagtatcttagtggctgagacattgtct
ccccagcctagagagtttctttggaggatggtttaaacatgagcttggct
attatgtaacatattattttatatctgttcagtcattatctgtatttatt
caccttcatctatttctgaatgtggatcctgagagatagaaagaccttta
tagtcatcattaatttttattgcacataatctttactattaccaaaatac
aatcactgaaatttgttgaaaaattaaaagaatagctatgccttatcaaa
caatttttaaaccatcttaaagcatattctcttgtcagtttcaactcaaa
ctcagctgtggggaagaaatgctgtgcttcctctctctctctctctctct
ctctctctctctctctctctctctctctgtgtgtgtgtctctctgtctct
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29670198_29671349
seq2: B6Ng01-276M01.b_44_1206 (reverse)

seq1  TTCTAGAATGTCCTTCTGAATTTAA-TGGTTTTAATTGTGTT-CATA-TC  47
      ||||||||||||| || ||||| || ||| |||||| ||||| |||| ||
seq2  TTCTAGAATGTCC-TCGGAATTCAATTGGCTTTAATGGTGTTCCATATTC  49

seq1  TG-TGACTG-CCAGAA-TGGAGTCAGTTGTAA--CTTAGT-AAGTGGGCA  91
      || |||||| |||||| ||||||||  |||||  |||||| |||||||||
seq2  TGTTGACTGCCCAGAATTGGAGTCAAGTGTAAACCTTAGTAAAGTGGGCA  99

seq1  GT-GTGTTTGCCCATCA-GGTTTC-TATGGCAAC-TCTTGTGAACAAGGT  137
      || |||||||||||||| |||||| ||||||||| |||||||||||||||
seq2  GTGGTGTTTGCCCATCAGGGTTTCTTATGGCAACTTCTTGTGAACAAGGT  149

seq1  AAAG-CCAGGGTGTTTTAAAGCACACATGTCTATGAGAATTCTCTGTAAG  186
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAGGGTGTTTTAAAGCACACATGTCTATGAGAATTCTCTGTAAG  199

seq1  CATGGAGTCTTCTGATCTATTCGTAAACATGAAGAAACCTAAGTCAAAAT  236
      ||||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  CATGGAGTC-TCTGATCTATTCGTAAACATGAAGAAA-CTAAGTCAAAAT  247

seq1  TTGTCACTTAAGCTCTCAATTTATATACATTATACCAGGAGGAATATATT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTTAAGCTCTCAATTTATATACATTATACCAGGAGGAATATATT  297

seq1  CAGGGTCTGGTATAATCAGACTCTTCTATTGTTCATACTATTTGGTCAAA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTGGTATAATCAGACTCTTCTATTGTTCATACTATTTGGTCAAA  347

seq1  AATATTGTTCTCTCATGAAATTGCTTAATATCTCAAAATGAAAGCTGTAC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTCTCTCATGAAATTGCTTAATATCTCAAAATGAAAGCTGTAC  397

seq1  GCTAATATAAGCAAGGATTGCACCTCTGAGCAAGAATAAATATTTCATGA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATAAGCAAGGATTGCACCTCTGAGCAAGAATAAATATTTCATGA  447

seq1  AATGTCTAGTTCAGGACTGTGACATAAATGCCTGGCTTTGTGGTGTTGAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTAGTTCAGGACTGTGACATAAATGCCTGGCTTTGTGGTGTTGAA  497

seq1  ACAGATCAGAGGAGATCATGTAAATATTTAAAGACAGGGATCGGACATTT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGAGGAGATCATGTAAATATTTAAAGACAGGGATCGGACATTT  547

seq1  ATTGCTACAGTAGCCACAGCTATGAATGTGTATGAAACATGAAAGTGAAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTACAGTAGCCACAGCTATGAATGTGTATGAAACATGAAAGTGAAA  597

seq1  ATAAGGGCTAATCAGCTTGATATAAAATATTACAAAGTCTTAAAAAGACT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGCTAATCAGCTTGATATAAAATATTACAAAGTCTTAAAAAGACT  647

seq1  GGGCCAGTGAAAATGCTCCCAGATATCTGTGAGCATCTCTGTGCTCACTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTGAAAATGCTCCCAGATATCTGTGAGCATCTCTGTGCTCACTT  697

seq1  GCAATACAGACTTCTATGTAGCATTATAACAACCATGGTGAGGGTGTCAG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATACAGACTTCTATGTAGCATTATAACAACCATGGTGAGGGTGTCAG  747

seq1  GGACATTACAGGGACAGTGGTCACTTAGTTCTATATGAGGAATCAAAATT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTACAGGGACAGTGGTCACTTAGTTCTATATGAGGAATCAAAATT  797

seq1  CCTGTATATGAAATTTCAAATAGTCATTCTGTATTTTGAGATATCACCAC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATATGAAATTTCAAATAGTCATTCTGTATTTTGAGATATCACCAC  847

seq1  AGCTTACCATTGCTTTATCATTTGTTCCTATTTTGTTCAAGTATTATTTG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACCATTGCTTTATCATTTGTTCCTATTTTGTTCAAGTATTATTTG  897

seq1  ATGGCTCAATAAGATAGAAACTACTATCTGCCTATTTCTGTGTTAAATTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAATAAGATAGAAACTACTATCTGCCTATTTCTGTGTTAAATTC  947

seq1  TAGAAACACAGTGGAAGACATAGTATATGCACTGTTCTAGAGAGGAAAAC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACACAGTGGAAGACATAGTATATGCACTGTTCTAGAGAGGAAAAC  997

seq1  AATACATTACATGCTAATAGAAATACTAACACATGATCTGATTCCTTAAG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTACATGCTAATAGAAATACTAACACATGATCTGATTCCTTAAG  1047

seq1  ATTTTTAAGAGAAGATTGCTTACATTCTAGAAAATTATAAACTACTATCA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGAGAAGATTGCTTACATTCTAGAAAATTATAAACTACTATCA  1097

seq1  GAATAATTAAGTGTTGAAAAATGTGTGTCCAAGCAGCCAGGCACTGATCC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTAAGTGTTGAAAAATGTGTGTCCAAGCAGCCAGGCACTGATCC  1147

seq1  CTACTTCTGAGAATTC  1152
      ||||||||||||||||
seq2  CTACTTCTGAGAATTC  1163

seq1: chr3_29601739_29602193
seq2: B6Ng01-276M01.g_67_519

seq1  GAATTCAGATCCTTGTGCTCATGAGTATCTTAGTGGCTGAGACATTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCTTGTGCTCATGAGTATCTTAGTGGCTGAGACATTGTCT  50

seq1  CCCCAGCCTAGAGAGTTTCTTTGGAGGATGGTTTAAACATGAGCTTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCTAGAGAGTTTCTTTGGAGGATGGTTTAAACATGAGCTTGGCT  100

seq1  ATTATGTAACATATTATTTTATATCTGTTCAGTCATTATCTGTATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTAACATATTATTTTATATCTGTTCAGTCATTATCTGTATTTATT  150

seq1  CACCTTCATCTATTTCTGAATGTGGATCCTGAGAGATAGAAAGACCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCATCTATTTCTGAATGTGGATCCTGAGAGATAGAAAGACCTTTA  200

seq1  TAGTCATCATTAATTTTTATTGCACATAATCTTTACTATTACCAAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATCATTAATTTTTATTGCACATAATCTTTACTATTACCAAAATAC  250

seq1  AATCACTGAAATTTGTTGAAAAATTAAAAGAATAGCTATGCCTTATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGAAATTTGTTGAAAAATTAAAAGAATAGCTATGCCTTATCAAA  300

seq1  CAATTTTTAAACCATCTTAAAGCATATTCTCTTGTCAGTTTCAACTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTAAACCATCTTAAAGCATATTCTCTTGTCAGTTTCAACTCAAA  350

seq1  CTCAGCTGTGGGGAAGAAATGCTGTGCTTCCTCTCTCTCTCTCTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGTGGGGAAGAAATGCTGTGCTTCCTCTCTCTCTCTCTCTCTCT  400

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCCTATCT  450
      |||||||||||||||||||||||||||| | | | | |  | | || |||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGT--CTCTCTGTCT  448

seq1  CTCTC  455
      |||||
seq2  CTCTC  453