BAC Information

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BAC

Clone NameB6Ng01-276N21
Chromosome3 (Build37)
Map Location 118,414,258 - 118,415,397
singlet/doubletsinglet
Overlap geneDpyd
Upstream geneEG668759, Snx7, LOC100043260
Downstream geneLOC100043275, LOC100043278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276N21.bB6Ng01-276N21.g
ACCGA077539GA077540
length1,0571,128
definitionB6Ng01-276N21.b B6Ng01-276N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctcttcaatacttttaacatgaaggggtataatattttg
tcaaatgctttttctgcatctaaggagatgatttttttttcttgagttgg
tttatatagtagattacattaatggatttttgaatattgaaataaccttg
tatcccttggatgaatcctacttaatcatggtgaatgatggttttgatgt
gttcttagattcagtttgcgagaattttattaaatatgtttgcatccata
tttataagtaagattggtctgaagttctcttttttggttgggttcttgtg
tggtttaggtatcagaataattgtgcattcatagaatgagctagatagta
ttccttttgttcctattttatggaatagtttgaggaatattggtatcaag
ttttctttgaagatctgggagaattctgcactaaatacatctggcactgg
gcttttattggttgcaaggtttttaatgaattcttctattgttttagggg
atatgggctggtttaagtagtttacctgctcttgatttaactttggtatg
tggtatccgtgtagaaaaccatccatttcatctacattttccagttttgt
tgagtgtaggcttttgtagtaggatctaatgatttttccaatttctccag
tttctgttgttatgtctccctttccatttctgattttcttttttcttttt
ataatttttaaaaatatttttattacgtattttcctcaattacatttcca
atgctatcccaaaagtcccccataccctcccccccccccacttccctacc
cacccatttacatttttttttttttggccctggcattcccctgtctgggg
gcatataaagtttgtgtgtccaatgggcttctctttccatgatggccgac
taggtcattctttgatacataatgcatctgaagccaagagcacggggtca
ctggttagttcaacatgttgttccacctatagggttgcaaatcctttagc
tcttggtgactttttgcttgctcctctattggtgaagcctgtggatccat
cgattag

gaattctttgtttagatctgtacctcggttttaataggattacttggttc
tctggagtctaactttttgagttatttttatatattggatattagccctc
tataggatgtagagctggtaaagatcttttcccaatctgttgaatgcagt
tttgtactattgacagtatcctttgccttacagaagctttgcaattttat
gaggttccatttgtcaattcttgatcttagagcataagccattggtgttc
tattcgggaaattttctccatttgcccatatgtttgaggctcttcctcac
tttcccttcagatgatgactattttattctaaaatttctgagattgttat
cagcatagtgtctactccatgaatcaaaagcagattgagaatttacttac
attcatttctttcttgtatcctagctttctatttactagttttccaaaaa
tctagctaaaacaaagacctaatcatttattgttttcactgaatatttaa
atgcatagattttggcaattaaaatagttctaggcatgtatctgaaatgt
ttgtcttctttggatacccaacattggatactgaatgggatcaatttatg
cagtttatctgctagtatttaaaagaaacgctttttctaaaaaggagatc
aattcattcctatttagtagtcaaaaaggctgtagcaggggctaactgta
acagtgataaactataattttcttaattctatattaaagttttattcaga
cccatttaaattaagtggcctttctacagttttctctttatagttctttt
tatttttttattattttatttttagagtattttttaattagataaaatta
catcacatattctttgctattttttgattcattcttttcatatctctgct
cttactcctctcaaattggcaggctctttttctttattattcatacattt
atatgcaaagatatacacaaatatatacataaaattgcaatgttcatttt
tgtgttgtatatgatttcagagctattttgctgtatacaataagatatgc
tagtgacttttttattcatgaataatggttggtaaagttttgcaagacta
atcactattttgaatgcagcttctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118414258_118415397
seq2: B6Ng01-276N21.g_68_1195

seq1  GAATTCTTTGTTTAGATCTGTACCTCGGTTTTAATAGGATTACTTGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGATCTGTACCTCGGTTTTAATAGGATTACTTGGTTC  50

seq1  TCTGGAGTCTAACTTTTTGAGTTATTTTTATATATTGGATATTAGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCTAACTTTTTGAGTTATTTTTATATATTGGATATTAGCCCTC  100

seq1  TATAGGATGTAGAGCTGGTAAAGATCTTTTCCCAATCTGTTGAATGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATGTAGAGCTGGTAAAGATCTTTTCCCAATCTGTTGAATGCAGT  150

seq1  TTTGTACTATTGACAGTATCCTTTGCCTTACAGAAGCTTTGCAATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTATTGACAGTATCCTTTGCCTTACAGAAGCTTTGCAATTTTAT  200

seq1  GAGGTTCCATTTGTCAATTCTTGATCTTAGAGCATAAGCCATTGGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCCATTTGTCAATTCTTGATCTTAGAGCATAAGCCATTGGTGTTC  250

seq1  TATTCGGGAAATTTTCTCCATTTGCCCATATGTTTGAGGCTCTTCCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGGGAAATTTTCTCCATTTGCCCATATGTTTGAGGCTCTTCCTCAC  300

seq1  TTTCCCTTCAGATGATGACTATTTTATTCTAAAATTTCTGAGATTGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCAGATGATGACTATTTTATTCTAAAATTTCTGAGATTGTTAT  350

seq1  CAGCATAGTGTCTACTCCATGAATCAAAAGCAGATTGAGAATTTACTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAGTGTCTACTCCATGAATCAAAAGCAGATTGAGAATTTACTTAC  400

seq1  ATTCATTTCTTTCTTGTATCCTAGCTTTCTATTTACTAGTTTTCCAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTCTTTCTTGTATCCTAGCTTTCTATTTACTAGTTTTCCAAAAA  450

seq1  TCTAGCTAAAACAAAGACCTAATCATTTATTGTTTTCACTGAATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTAAAACAAAGACCTAATCATTTATTGTTTTCACTGAATATTTAA  500

seq1  ATGCATAGATTTTGGCAATTAAAATAGTTCTAGGCATGTATCTGAAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGATTTTGGCAATTAAAATAGTTCTAGGCATGTATCTGAAATGT  550

seq1  TTGTCTTCTTTGGATACCCAACATTGGATACTGAATGGGATCAATTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCTTTGGATACCCAACATTGGATACTGAATGGGATCAATTTATG  600

seq1  CAGTTTATCTGCTAGTATTTAAAAGAAACGCTTTTTCTAAAAAGGAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATCTGCTAGTATTTAAAAGAAACGCTTTTTCTAAAAAGGAGATC  650

seq1  AATTCATTCCTATTTAGTAGTCAAAAAGGCTGTAGCAGGGGCTAACTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTCCTATTTAGTAGTCAAAAAGGCTGTAGCAGGGGCTAACTGTA  700

seq1  ACAGTGATAAACTATAATTTTCTTAATTCTATATTAAAGTTTTATTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATAAACTATAATTTTCTTAATTCTATATTAAAGTTTTATTCAGA  750

seq1  CCCATTTAAATTAAGTGGCCTTTCTACAGTTTTCTCTTTATAGTTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTAAATTAAGTGGCCTTTCTACAGTTTTCTCTTTATAGTTCTTTT  800

seq1  TATTTTTTTATTATTTTATTTTTAGAGTATTTTTTAATTAGATAAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTATTATTTTATTTTTAGAGTATTTTTTAATTAGATAAAATTA  850

seq1  CATCACATATTCTTTGCTATTTTTTGATTCATTCTTTTCATATCTCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATATTCTTTGCTATTTTTTGATTCATTCTTTTCATATCTCTGCT  900

seq1  CTTACTCCTCTCAAATTGGCAGGCTCTTTTTCTTTATTATTCATACATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCCTCTCAAATTGGCAGGCTCTTTTTCTTTATTATTCATACATTT  950

seq1  ATATGCAAAGATATACACAAATATATACATAAAATTGCAATGTTCATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAAGATATACACAAATATATACATAAAATTGCAATGTTCATTTT  1000

seq1  TGTTGTTTGTATATGATTTCAGAGCTATTTTTGCCTGTATAAACAATAAA  1050
      |||   |||||||||||||||||||||||||   ||||||  ||||| ||
seq2  TGT--GTTGTATATGATTTCAGAGCTATTTT--GCTGTAT--ACAAT-AA  1043

seq1  GAATTATGCTTAGTGAC-TTTTTATTCATGAAATATG--TTGTAAAATTT  1097
      ||  ||||| ||||||| ||||||||||||||  |||  | ||||| |||
seq2  GA--TATGC-TAGTGACTTTTTTATTCATGAATAATGGTTGGTAAAGTTT  1090

seq1  TGGCAAAGAACTATCAACCTATTTTTGATTGCAGCTTCTATTA  1140
      ||   ||||   ||||  ||| |||||| ||||||||||||||
seq2  TG--CAAGACTAATCA--CTA-TTTTGAATGCAGCTTCTATTA  1128


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