BAC Information

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BAC

Clone NameB6Ng01-277C10
Chromosome3 (Build37)
Map Location 8,011,778 - 8,143,176
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7, LOC620822
Downstream geneLOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277C10.bB6Ng01-277C10.g
ACCGA077746GA077747
length4641,083
definitionB6Ng01-277C10.b B6Ng01-277C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,142,707 - 8,143,176)(8,011,778 - 8,012,863)
sequence
tttccaacggatagaaacttgaatcaagcctattctccctttccaatgtc
agatgtttatgaagcatgacttagaactcctttcaccctctgaatgtcta
tctaagtttggacatcagaacttacttatgctaatatgattttcttctta
gatttgttttctagtttatttttgtctgtggaagcagcagtattatctgc
tattctttggataggctttcctttctcctggaaattttctggtgtatctt
attcatgatattctaccaaccaattagctatggcataatttcctcctgtt
aatggtgacaggttgtataaataatttagaatgaaagttaatatttgagt
tcaaactgtctctaatattaacaaaatgttttatgaagagagaaagaaga
aagggagggagagagagagagagagagagagagagagagagagagagaga
gagagagagggaga
gaattccacagagtggtaacaccagctctgaagcaaataaagcaacagag
ttctctctatccatcatcctacaggttacatcacaggtagtttgtcacag
gtttgatggtacatgtgctaagagatactctgagactgggtagagggtat
attttggaatgctctgaaacttttctcatttggctcagccaactccattt
ggaaatctacacaagagtagagaaatggggcaaaggcaacagtttcactg
ccaactgtctaattgcgcttttccatagtcttcagttctgtgaaaatgat
cattttgataggaagtgctgacatggattcttgaggacacacacaaaaaa
tatttgccgtaagttattttctggggcttttgtaagcagaaattccagtc
accatttcagcctggccaaagtttgttagttcccgaatctcagaccttaa
atttattttttatttttgaagctgtccagcatttctggttgcataagaaa
gtttgccatcatttcttagggccctccattctattgatttgagcatgctc
tccagttctatatattctttctttcctaatccatcatgcctgcatctaca
tgccgttatctgcttgatcatggtcttatcagagttgacactgtattctt
aattattctttttattcagtaatatttttctctttattcaatattcagat
cattattttatctattcttgggagtcctaccttagatttatctattctga
aaatcttctgaatatatgcatgcttttttgtcatctgtatattgaaataa
caacatcccgtgatatacttgcatgtccataattccctgcacaacagtgt
tccaacactcacatagccacatattgattataagctctgtatatgaatat
atatccacatgttatttataagctttacagagagagatgggttttcttct
atccattgtgtatctatgtatggctactggctaaatctaatacatattca
catataaatgtgaatatgtgtgtgtattgtatagctatataacaaaatta
tatgaaaatactcatcattatctctctaacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_8142707_8143176
seq2: B6Ng01-277C10.b_44_513 (reverse)

seq1  TCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCTCCCTCCCTTTCTTCTTTCTCTCTTCATAAAACATTTTGTTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCTCCCTTTCTTCTTTCTCTCTTCATAAAACATTTTGTTAATAT  100

seq1  TAGAGACAGTTTGAACTCAAATATTAACTTTCATTCTAAATTATTTATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGTTTGAACTCAAATATTAACTTTCATTCTAAATTATTTATAC  150

seq1  AACCTGTCACCATTAACAGGAGGAAATTATGCCATAGCTAATTGGTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTCACCATTAACAGGAGGAAATTATGCCATAGCTAATTGGTTGGT  200

seq1  AGAATATCATGAATAAGATACACCAGAAAATTTCCAGGAGAAAGGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCATGAATAAGATACACCAGAAAATTTCCAGGAGAAAGGAAAGC  250

seq1  CTATCCAAAGAATAGCAGATAATACTGCTGCTTCCACAGACAAAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAAAGAATAGCAGATAATACTGCTGCTTCCACAGACAAAAATAAA  300

seq1  CTAGAAAACAAATCTAAGAAGAAAATCATATTAGCATAAGTAAGTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACAAATCTAAGAAGAAAATCATATTAGCATAAGTAAGTTCTGA  350

seq1  TGTCCAAACTTAGATAGACATTCAGAGGGTGAAAGGAGTTCTAAGTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAACTTAGATAGACATTCAGAGGGTGAAAGGAGTTCTAAGTCATG  400

seq1  CTTCATAAACATCTGACATTGGAAAGGGAGAATAGGCTTGATTCAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAACATCTGACATTGGAAAGGGAGAATAGGCTTGATTCAAGTTT  450

seq1  CTATCCGTTGGAAAGAATTC  470
      ||||||||||||||||||||
seq2  CTATCCGTTGGAAAGAATTC  470

seq1: chr3_8011778_8012863
seq2: B6Ng01-277C10.g_65_1147

seq1  GAATTCCACAGAGTGGTAACACCAGCTCTGAAGCAAATAAAGCAACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGAGTGGTAACACCAGCTCTGAAGCAAATAAAGCAACAGAG  50

seq1  TTCTCTCTATCCATCATCCTACAGGTTACATCACAGGTAGTTTGTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTATCCATCATCCTACAGGTTACATCACAGGTAGTTTGTCACAG  100

seq1  GTTTGATGGTACATGTGCTAAGAGATACTCTGAGACTGGGTAGAGGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGGTACATGTGCTAAGAGATACTCTGAGACTGGGTAGAGGGTAT  150

seq1  ATTTTGGAATGCTCTGAAACTTTTCTCATTTGGCTCAGCCAACTCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAATGCTCTGAAACTTTTCTCATTTGGCTCAGCCAACTCCATTT  200

seq1  GGAAATCTACACAAGAGTAGAGAAATGGGGCAAAGGCAACAGTTTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTACACAAGAGTAGAGAAATGGGGCAAAGGCAACAGTTTCACTG  250

seq1  CCAACTGTCTAATTGCGCTTTTCCATAGTCTTCAGTTCTGTGAAAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTCTAATTGCGCTTTTCCATAGTCTTCAGTTCTGTGAAAATGAT  300

seq1  CATTTTGATAGGAAGTGCTGACATGGATTCTTGAGGACACACACAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGATAGGAAGTGCTGACATGGATTCTTGAGGACACACACAAAAAA  350

seq1  TATTTGCCGTAAGTTATTTTCTGGGGCTTTTGTAAGCAGAAATTCCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCCGTAAGTTATTTTCTGGGGCTTTTGTAAGCAGAAATTCCAGTC  400

seq1  ACCATTTCAGCCTGGCCAAAGTTTGTTAGTTCCCGAATCTCAGACCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCAGCCTGGCCAAAGTTTGTTAGTTCCCGAATCTCAGACCTTAA  450

seq1  ATTTATTTTTTATTTTTGAAGCTGTCCAGCATTTCTGGTTGCATAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTTATTTTTGAAGCTGTCCAGCATTTCTGGTTGCATAAGAAA  500

seq1  GTTTGCCATCATTTCTTAGGGCCCTCCATTCTATTGATTTGAGCATGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCATCATTTCTTAGGGCCCTCCATTCTATTGATTTGAGCATGCTC  550

seq1  TCCAGTTCTATATATTCTTTCTTTCCTAATCCATCATGCCTGCATCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCTATATATTCTTTCTTTCCTAATCCATCATGCCTGCATCTACA  600

seq1  TGCCGTTATCTGCTTGATCATGGTCTTATCAGAGTTGACACTGTATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTTATCTGCTTGATCATGGTCTTATCAGAGTTGACACTGTATTCTT  650

seq1  AATTATTCTTTTTATTCAGTAATATTTTTCTCTTTATTCAATATTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTTTTTATTCAGTAATATTTTTCTCTTTATTCAATATTCAGAT  700

seq1  CATTATTTTATCTATTCTTGGGAGTCCTACCTTAGATTTATCTATTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTATCTATTCTTGGGAGTCCTACCTTAGATTTATCTATTCTGA  750

seq1  AAATCTTCTGAATATATGCATGCTTTTTTGTCATCTGTATATTGAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTCTGAATATATGCATGCTTTTTTGTCATCTGTATATTGAAATAA  800

seq1  CAACATCCCGTGATATACTTGCATGTCCATAATTCCCTGCACAACAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCCGTGATATACTTGCATGTCCATAATTCCCTGCACAACAGTGT  850

seq1  TCCAACACTCACATAGCCACATATTGATTATAAGCTCTGTATATGAATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACTCACATAGCCACATATTGATTATAAGCTCTGTATATGAATAT  900

seq1  ATATCCACATGTTATTTATAAGCTTTACAGAGAGAGATGGGTTTTCTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCACATGTTATTTATAAGCTTTACAGAGAGAGATGGGTTTTCTTCT  950

seq1  ATCCATTGTGTATCTATGTATGGCTAACTGGCTAAATCT-ATACATATTC  999
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  ATCCATTGTGTATCTATGTATGGCT-ACTGGCTAAATCTAATACATATTC  999

seq1  ACATATAAATGTG-ATATGTGTGTGTATTTATATAGCTATATAAACAAAA  1048
      ||||||||||||| ||||||||||||| || |||||||||||||  ||| 
seq2  ACATATAAATGTGAATATGTGTGTGTA-TTGTATAGCTATATAACAAAAT  1048

seq1  TATATGAAAATACTCATTCATAATCTCTCTTAAACATA  1086
      |||||||||||||||| |||| ||||||||  ||||||
seq2  TATATGAAAATACTCA-TCATTATCTCTCT--AACATA  1083