BAC Information

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BAC

Clone NameB6Ng01-277H07
Chromosome3 (Build37)
Map Location 120,825,153 - 120,970,003
singlet/doubletdoublet
Overlap gene2510027J23Rik, LOC435752, Tmem56, LOC668778
Upstream genenone
Downstream geneLOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277H07.bB6Ng01-277H07.g
ACCGA077972GA077973
length1,107848
definitionB6Ng01-277H07.b B6Ng01-277H07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,968,913 - 120,970,003)(120,825,153 - 120,825,999)
sequence
gaattcaccaaagggggaggggaataaaaactaaaaaatgtagctaagat
aaaaatcccttagtgttcggtataatcaatgaaaaaaaaaaacagactct
ttctaagatatatttttgggatgattcaggctttcaaacatagtgagaac
atctaggaagagaaagaagtcagagaggcatggaggaactgtggaggtat
cagctgtttcagcaccacgaggagaacaggaaatagacatttttccagat
tctatgctttctgtggacgcctctgaagaaggttggcgcttcagcaaaat
gagggtggaggcaaagtgacatgcttgggcgtcggaggacattactgatg
ggtatctgatggatatgttaaaaaaattggatatcatttaggttagatac
atgttctaaaaagccaaaagagccaggccagttattaactcccctccctc
cccacccccaggaggccattcaagagaaatgttaccatgcacagtacttg
ccttgacaatgagttctgttcacctggtcaggatgatgtaaaccctaatt
actgtttattgattgtgatgaggctaatttgggagcaagggtggggcggg
tattttgggacatggtggcagtggtgttgtggaaagagctagatcctcaa
atactgtgacaagctgtcagtcagtgacgtctggagtggaaaatcaagaa
acatagacgagtattagaaaattcagaatacatggtagggtttgaggaat
gtagctgaggacaggtgagaagtaggcaggccatggcttttacttgaagc
tctaagagcccttttaaaattccatatataaaatttcatatacattttaa
atgactcatatatctattatctatgactttttattaaaaataaaatgtaa
ggaaaggttattacacatattatttcagggaagaaaaacattattgtaag
cacaaagaactcagaacttatccagcatttttaccccttatagggataac
attttttattattctaccaaatagttcttccttaaaacacaatggaaggt
aattttaggtaaggtactcattaacaatctgcccaaaaggttcttgaata
tactaaa
gaattcattagcaaggatgaatttttcctcttattctgtttctggacggg
ggggcggggggggaagagaggagagacagacagagacagagagacgcaga
gagaggcagagagacagagagacacagagagagagagcattctgccagac
cctcaaccctgttttttacattagaaaaaaaacattctactgaacataat
gttatggatcttgacttttacagactggcattcaaaaattcatgttttaa
tatttctttgtttttatttttatgtgtatgagtgtttttcctgaatgtat
atgaatgtatcacacacaagccttgttgtgcctgcagaggtctggagaag
gcatcagagcccctgagactggagctacctgtaggtgctgggaacctaac
ttcagccctctgcaagaacagctagtgctctgaactgctgagccaactct
tcagtttgacagttcaaaatttttaaaacttgacttacaatgagcatatg
atcaaaacgatggaataaatactaaattaaagtttcgctgagtttctatc
tttccatattaacctagaaacatgacttaaattaacactcacaaatttca
ccaaattagactaactatagacatcctaacccagatacagtcactagcac
ctgtcacccagcactctcaggaggctgatgcaagagaaccgtgagttcca
ggccagcctggactacacagtaagaccctgtcaggaaagaaggatgcaaa
gtcaaggacatctcaagccaggcgtgatgatacacacctttatcccagca
ctcagggtacagagatagataggtaggtaggtaggtaggttaggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120968913_120970003
seq2: B6Ng01-277H07.b_43_1149 (reverse)

seq1  TTTAGTATA-TCAAGAA-CTTTTTGCCAGA-TGTT-ATGAGTA-CTTACT  45
      ||||||||| ||||||| ||||| | |||| |||| ||||||| ||||| 
seq2  TTTAGTATATTCAAGAACCTTTTGGGCAGATTGTTAATGAGTACCTTACC  50

seq1  TAAAATTACTTTCCATTGTGTTTT-AGGAAGAAACTATTTG--AAGATAT  92
      ||||||||| |||||||||||||| |||||| |||||||||  |  ||| 
seq2  TAAAATTACCTTCCATTGTGTTTTAAGGAAG-AACTATTTGGTAGAATAA  99

seq1  TAAAAAATGTTATCCCTAT-AGGGGT-AAAATGCTGGATAAGTTCTGAGT  140
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TAAAAAATGTTATCCCTATAAGGGGTAAAAATGCTGGATAAGTTCTGAGT  149

seq1  TCTTTGTGCTTAC-ATTATGTTTTTC-TCCCTGAA--TATATGTGT-ATT  185
      ||||||||||||| || ||||||||| ||||||||   |||||||| || 
seq2  TCTTTGTGCTTACAATAATGTTTTTCTTCCCTGAAATAATATGTGTAATA  199

seq1  ACCTTTCTTTACATTTTATTTTTAAT-AAAAGTCATAGAT-ATAGATATA  233
      ||||||| |||||||||||||||||| ||||||||||||| |||||||||
seq2  ACCTTTCCTTACATTTTATTTTTAATAAAAAGTCATAGATAATAGATATA  249

seq1  TGAGTCATTTAAAATGTATATGAAATTTTATATATGGAATTTTAAAAGGG  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATTTAAAATGTATATGAAATTTTATATATGGAATTTTAAAAGGG  299

seq1  CTCTTAGAGCTTCAAGTAAAAGCCATGGCCTGCCTACTTCTCACCTGTCC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGAGCTTCAAGTAAAAGCCATGGCCTGCCTACTTCTCACCTGTCC  349

seq1  TCAGCTACATTCCTCAAACCCTACCATGTATTCTGAATTTTCTAATACTC  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTACATTCCTCAAACCCTACCATGTATTCTGAATTTTCTAATACTC  399

seq1  GTCTATGTTTCTTGATTTTCCACTCCAGACGTCACTGACTGACAGCTTGT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTTTCTTGATTTTCCACTCCAGACGTCACTGACTGACAGCTTGT  449

seq1  CACAGTATTTGAGGATCTAGCTCTTTCCACAACACCACTGCCACCATGTC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATTTGAGGATCTAGCTCTTTCCACAACACCACTGCCACCATGTC  499

seq1  CCAAAATACCCGCCCCACCCTTGCTCCCAAATTAGCCTCATCACAATCAA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATACCCGCCCCACCCTTGCTCCCAAATTAGCCTCATCACAATCAA  549

seq1  TAAACAGTAATTAGGGTTTACATCATCCTGACCAGGTGAACAGAACTCAT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTAATTAGGGTTTACATCATCCTGACCAGGTGAACAGAACTCAT  599

seq1  TGTCAAGGCAAGTACTGTGCATGGTAACATTTCTCTTGAATGGCCTCCTG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGGCAAGTACTGTGCATGGTAACATTTCTCTTGAATGGCCTCCTG  649

seq1  GGGGTGGGGAGGGAGGGGAGTTAATAACTGGCCTGGCTCTTTTGGCTTTT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGAGGGAGGGGAGTTAATAACTGGCCTGGCTCTTTTGGCTTTT  699

seq1  TAGAACATGTATCTAACCTAAATGATATCCAATTTTTTTAACATATCCAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATGTATCTAACCTAAATGATATCCAATTTTTTTAACATATCCAT  749

seq1  CAGATACCCATCAGTAATGTCCTCCGACGCCCAAGCATGTCACTTTGCCT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCCATCAGTAATGTCCTCCGACGCCCAAGCATGTCACTTTGCCT  799

seq1  CCACCCTCATTTTGCTGAAGCGCCAACCTTCTTCAGAGGCGTCCACAGAA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCATTTTGCTGAAGCGCCAACCTTCTTCAGAGGCGTCCACAGAA  849

seq1  AGCATAGAATCTGGAAAAATGTCTATTTCCTGTTCTCCTCGTGGTGCTGA  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAATCTGGAAAAATGTCTATTTCCTGTTCTCCTCGTGGTGCTGA  899

seq1  AACAGCTGATACCTCCACAGTTCCTCCATGCCTCTCTGACTTCTTTCTCT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGATACCTCCACAGTTCCTCCATGCCTCTCTGACTTCTTTCTCT  949

seq1  TCCTAGATGTTCTCACTATGTTTGAAAGCCTGAATCATCCCAAAAATATA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATGTTCTCACTATGTTTGAAAGCCTGAATCATCCCAAAAATATA  999

seq1  TCTTAGAAAGAGTCTGTTTTTTTTTTTCATTGATTATACCGAACACTAAG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAAGAGTCTGTTTTTTTTTTTCATTGATTATACCGAACACTAAG  1049

seq1  GGATTTTTATCTTAGCTACATTTTTTAGTTTTTATTCCCCTCCCCCTTTG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTATCTTAGCTACATTTTTTAGTTTTTATTCCCCTCCCCCTTTG  1099

seq1  GTGAATTC  1091
      ||||||||
seq2  GTGAATTC  1107

seq1: chr3_120825153_120825999
seq2: B6Ng01-277H07.g_65_912

seq1  GAATTCATTAGCAAGGATGAATTTTTCCTCTTATTCTGTTTCTGGACGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCAAGGATGAATTTTTCCTCTTATTCTGTTTCTGGACGGG  50

seq1  GGGGCGGGGGGGGAAGAGAGGAGAGACAGACAGAGACAGAGAGACGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGGGGGGGGAAGAGAGGAGAGACAGACAGAGACAGAGAGACGCAGA  100

seq1  GAGAGGCAGAGAGACAGAGAGACACAGAGAGAGAGAGCATTCTGCCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGAGACAGAGAGACACAGAGAGAGAGAGCATTCTGCCAGAC  150

seq1  CCTCAACCCTGTTTTTTACATTAGAAAAAAAACATTCTACTGAACATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCCTGTTTTTTACATTAGAAAAAAAACATTCTACTGAACATAAT  200

seq1  GTTATGGATCTTGACTTTTACAGACTGGCATTCAAAAATTCATGTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGATCTTGACTTTTACAGACTGGCATTCAAAAATTCATGTTTTAA  250

seq1  TATTTCTTTGTTTTTATTTTTATGTGTATGAGTGTTTTTCCTGAATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTGTTTTTATTTTTATGTGTATGAGTGTTTTTCCTGAATGTAT  300

seq1  ATGAATGTATCACACACAAGCCTTGTTGTGCCTGCAGAGGTCTGGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTATCACACACAAGCCTTGTTGTGCCTGCAGAGGTCTGGAGAAG  350

seq1  GCATCAGAGCCCCTGAGACTGGAGCTACCTGTAGGTGCTGGGAACCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAGCCCCTGAGACTGGAGCTACCTGTAGGTGCTGGGAACCTAAC  400

seq1  TTCAGCCCTCTGCAAGAACAGCTAGTGCTCTGAACTGCTGAGCCAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCTCTGCAAGAACAGCTAGTGCTCTGAACTGCTGAGCCAACTCT  450

seq1  TCAGTTTGACAGTTCAAAATTTTTAAAACTTGACTTACAATGAGCATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGACAGTTCAAAATTTTTAAAACTTGACTTACAATGAGCATATG  500

seq1  ATCAAAACGATGGAATAAATACTAAATTAAAGTTTCGCTGAGTTTCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACGATGGAATAAATACTAAATTAAAGTTTCGCTGAGTTTCTATC  550

seq1  TTTCCATATTAACCTAGAAACATGACTTAAATTAACACTCACAAATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATATTAACCTAGAAACATGACTTAAATTAACACTCACAAATTTCA  600

seq1  CCAAATTAGACTAACTATAGACATCCTAACCCAGATACAGTCACTAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTAGACTAACTATAGACATCCTAACCCAGATACAGTCACTAGCAC  650

seq1  CTGTCACCCAGCACTCTCAGGAGGCTGATGCAAGAGAACCGTGAGTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACCCAGCACTCTCAGGAGGCTGATGCAAGAGAACCGTGAGTTCCA  700

seq1  GGCCAGCCTGGACTACACAGTAAGACCCTGTCAGGAAAGAAGGATGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGACTACACAGTAAGACCCTGTCAGGAAAGAAGGATGCAAA  750

seq1  GTCAAGGACATCTCAAGCCAGGCGTGATGATACACACCTTTATCCCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGACATCTCAAGCCAGGCGTGATGATACACACCTTTATCCCAGCA  800

seq1  CTCAGGGTACAGAGATAGATAGGTAGGTAGGTAGGTAGG-TAGGTAGG  847
      ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAGGGTACAGAGATAGATAGGTAGGTAGGTAGGTAGGTTAGGTAGG  848