BAC Information

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BAC

Clone NameB6Ng01-277M09
Chromosome3 (Build37)
Map Location 73,699,222 - 73,700,342
singlet/doubletsinglet
Overlap genenone
Upstream gene2010204N08Rik, Slitrk3, Bche
Downstream geneLOC667425, LOC619764, LOC667434, LOC100041551, EG667459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277M09.bB6Ng01-277M09.g
ACCGA078199GA078200
length1,1251,164
definitionB6Ng01-277M09.b B6Ng01-277M09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgacatgaaacatccaaaaaattctataatactatgagagact
taagagtaatagaaacagccgggcggtggtggcgaacacctttaatccca
gcactcaggaggcagaggcagtcagaagcttacagatccattttccccac
agtagtgctctgactgaaaaaggaaacaccttttcttctcaaagctaaac
ctgaggtgaaaggtttaaaaagaaaagggaaaaaaatactcaccagagct
aatgcagagacaaagtgtaaagcagagactgaaggaaaggccatccagag
actcccacacttgggattccatcccatatacagtcaccaaatgcagatgc
tactgtggatgccaagaagtgcatgctcacaggagactgatatagctgcc
tcctgaaagaccctgccagagcatgaaaaataccaaggtggatgcttgta
gccaaccattggcctgagcatggggtccccaatggaggagttagagaaag
gattgaaggagctgaagggatttgcaaccccataggaagaactacaatat
cagccaatcagacacactagtgctcccagggactaaacctccaaccaagg
agagacccatggctccagctaaatatgtaacagaggatggccttgtctgg
catccatagaaggagaggcctttggtcctgcctgtgaaggctcaatgccc
cagtgtagaagaagaccagggcagggaggatgggaatcagtgggtggggg
aacaacctcatagaaacaggggaaagggagatgggatagggaatttccat
gggggggaaaccgagaaagaggataacatttgatatgtaaataaagaaaa
tatccaataataaactaacaagcaaacaaacaaagaggacaagaaggcaa
tactgaaagctgtacactgtaacaattagaatacataggtgaaattttgc
atgttacctactttctaaattgccagtccaccatgagaaatgacatacaa
caattatcctctgaagatctgtagaggaaacaatttttgggccacattca
ttcacagaaatattcaaactactgtattctacatgaaaaaacagcagaag
aacaacacatgtttgtgaacaacat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatagatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgttgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacacggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcaaccta
taggtggaacaacattatgaactaaccagtaccctgagctctgactctag
gtgcatattgtatcaaagatgcctagtcgtcattcactgaagagaggcca
atgacccgcgacttggtgccggatacaggctacgccaggtcaaatggggg
ggtaatctgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_73699222_73700342
seq2: B6Ng01-277M09.b_49_1173 (reverse)

seq1  ATGTTGTTCAC-AACATGTGTTGT--CTCTGCTG-TTTTTCATGTAAGAT  46
      ||||||||||| ||||||||||||   ||||||| |||||||||||  ||
seq2  ATGTTGTTCACAAACATGTGTTGTTCTTCTGCTGTTTTTTCATGTAGAAT  50

seq1  ACAGTAGTTTGAAATATTTCTGTG-ATGAAATTGTGGCC--AAAATTGTT  93
      ||||||||||| |||||||||||| |||||  |||||||  |||||||||
seq2  ACAGTAGTTTG-AATATTTCTGTGAATGAA--TGTGGCCCAAAAATTGTT  97

seq1  TCCTCTACAGATCTTCAGAGGATAATTGTTGTATGTCATTTCTCATGGTG  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACAGATCTTCAGAGGATAATTGTTGTATGTCATTTCTCATGGTG  147

seq1  GACTGGCAATTTAGAAAGTAGGTAACATGCAAAATTTCACCTATGTATTC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCAATTTAGAAAGTAGGTAACATGCAAAATTTCACCTATGTATTC  197

seq1  TAAATTGTTACAGTGTACAGCTTTCAGTATTGCCTTCTTGTCCTCTTTGT  243
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AATTGTTACAGTGTACAGCTTTCAGTATTGCCTTCTTGTCCTCTTTGT  246

seq1  TTGTTTGCTTGTTAGTTTATTATTGGATATTTTCTTTATTTACATATCAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCTTGTTAGTTTATTATTGGATATTTTCTTTATTTACATATCAA  296

seq1  ATGTTATCCTCTTTCTCGGTTT-CCCCCCATGGAAATTCCCTATCCCATC  342
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGTTATCCTCTTTCTCGGTTTCCCCCCCATGGAAATTCCCTATCCCATC  346

seq1  TCCCTTTCCCCTGTTTCTATGAGGTTGTTCCCCCACCCACTGATTCCCAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCCCCTGTTTCTATGAGGTTGTTCCCCCACCCACTGATTCCCAT  396

seq1  CCTCCCTGCCCTGGTCTTCTTCTACACTGGGGCATTGAGCCTTCACAGGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGCCCTGGTCTTCTTCTACACTGGGGCATTGAGCCTTCACAGGC  446

seq1  AGGACCAAAGGCCTCTCCTTCTATGGATGCCAGACAAGGCCATCCTCTGT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAAGGCCTCTCCTTCTATGGATGCCAGACAAGGCCATCCTCTGT  496

seq1  TACATATTTAGCTGGAGCCATGGGTCTCTCCTTGGTTGGAGGTTTAGTCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTAGCTGGAGCCATGGGTCTCTCCTTGGTTGGAGGTTTAGTCC  546

seq1  CTGGGAGCACTAGTGTGTCTGATTGGCTGATATTGTAGTTCTTCCTATGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCACTAGTGTGTCTGATTGGCTGATATTGTAGTTCTTCCTATGG  596

seq1  GGTTGCAAATCCCTTCAGCTCCTTCAATCCTTTCTCTAACTCCTCCATTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAAATCCCTTCAGCTCCTTCAATCCTTTCTCTAACTCCTCCATTG  646

seq1  GGGACCCCATGCTCAGGCCAATGGTTGGCTACAAGCATCCACCTTGGTAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCCATGCTCAGGCCAATGGTTGGCTACAAGCATCCACCTTGGTAT  696

seq1  TTTTCATGCTCTGGCAGGGTCTTTCAGGAGGCAGCTATATCAGTCTCCTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGCTCTGGCAGGGTCTTTCAGGAGGCAGCTATATCAGTCTCCTG  746

seq1  TGAGCATGCACTTCTTGGCATCCACAGTAGCATCTGCATTTGGTGACTGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATGCACTTCTTGGCATCCACAGTAGCATCTGCATTTGGTGACTGT  796

seq1  ATATGGGATGGAATCCCAAGTGTGGGAGTCTCTGGATGGCCTTTCCTTCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGATGGAATCCCAAGTGTGGGAGTCTCTGGATGGCCTTTCCTTCA  846

seq1  GTCTCTGCTTTACACTTTGTCTCTGCATTAGCTCTGGTGAGTATTTTTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTTTACACTTTGTCTCTGCATTAGCTCTGGTGAGTATTTTTTT  896

seq1  CCCTTTTCTTTTTAAACCTTTCACCTCAGGTTTAGCTTTGAGAAGAAAAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCTTTTTAAACCTTTCACCTCAGGTTTAGCTTTGAGAAGAAAAG  946

seq1  GTGTTTCCTTTTTCAGTCAGAGCACTACTGTGGGGAAAATGGATCTGTAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCTTTTTCAGTCAGAGCACTACTGTGGGGAAAATGGATCTGTAA  996

seq1  GCTTCTGACTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGTGTTCGCCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGACTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGTGTTCGCCA  1046

seq1  CCACCGCCCGGCTGTTTCTATTACTCTTAAGTCTCTCATAGTATTATAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCCCGGCTGTTTCTATTACTCTTAAGTCTCTCATAGTATTATAGA  1096

seq1  ATTTTTTGGATGTTTCATGTCAGGAATTC  1121
      |||||||||||||||||||||||||||||
seq2  ATTTTTTGGATGTTTCATGTCAGGAATTC  1125