BAC Information

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BAC

Clone NameB6Ng01-278K10
Chromosome3 (Build37)
Map Location 49,464,850 - 49,465,635
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039404, EG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779
Downstream genePcdh18, LOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278K10.bB6Ng01-278K10.g
ACCGA078839GA078840
length1,214786
definitionB6Ng01-278K10.b B6Ng01-278K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttagagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggaatgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgttgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatttttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcatgccaagatattttatattat
ttgtgactattgagaaggtgtgtttccctaatttctttctcagcctgttt
attctttgtatagagaagccattgacatgtttgagtttatttttattatc
cagcttaccttcacgaagctgtttatcagataagagttctctgtagattt
tagggttcactttatatatcaatccaatcacttgcaagaaaggaatattg
aacttcccttttccaattgatatccccttgaatgcctctttgttgtgcac
gagattgcatctgt
gaattcattatttaactctgatattttatggagactcaagttttttaacc
tacctagacagataaaaaaataccccaccaatactacttccagcaaacag
tgacatgtatagggatgcatcaaatataaaggtagaaatatgaatgtata
gataggatgaggattgtttatgcttttaacaaaacctatagctgagggta
atgtttcaattcagaaacgtatgtgataattttatcataggcaatatgac
agatagaactagaaggcagtttcaagttctacccatctggaagaactcag
tcagtagaatgcttacaactctccatgaaaatgtatcagagtatgttttg
atgacggctcacttctttttattactaacagtgaatcacattatccttca
cataaataaatgctaattcatttatttatgcaccatagaagatttttttc
gagtccctgcttctctagctgtaggaatgcaaaaaaaaaaaaaagagtag
catactcattttatgaaagcagatgcaagaacataaatggggacttatgt
atgacagttcaccttggtgaattcattaggaatcacattgagttaaaggc
taggtgtaggtgtagctcacttgtaggaatctctgacagcttttccttct
ttcaatcctcagcaccacaaagaagataaaagtcacaataaactgtagta
ctatttgagagtaaaggaaatctttctagctctccataccaagctgatta
ggaatcttacaggtggggtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49464850_49465635
seq2: B6Ng01-278K10.g_65_850 (reverse)

seq1  CACACACACACACACACACCCCACCTGTAAGATTCCTAATCAGCTTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACCCCACCTGTAAGATTCCTAATCAGCTTGGTA  50

seq1  TGGAGAGCTAGAAAGATTTCCTTTACTCTCAAATAGTACTACAGTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGCTAGAAAGATTTCCTTTACTCTCAAATAGTACTACAGTTTATT  100

seq1  GTGACTTTTATCTTCTTTGTGGTGCTGAGGATTGAAAGAAGGAAAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTTATCTTCTTTGTGGTGCTGAGGATTGAAAGAAGGAAAAGCTG  150

seq1  TCAGAGATTCCTACAAGTGAGCTACACCTACACCTAGCCTTTAACTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTCCTACAAGTGAGCTACACCTACACCTAGCCTTTAACTCAAT  200

seq1  GTGATTCCTAATGAATTCACCAAGGTGAACTGTCATACATAAGTCCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCCTAATGAATTCACCAAGGTGAACTGTCATACATAAGTCCCCAT  250

seq1  TTATGTTCTTGCATCTGCTTTCATAAAATGAGTATGCTACTCTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCTTGCATCTGCTTTCATAAAATGAGTATGCTACTCTTTTTTTT  300

seq1  TTTTTTGCATTCCTACAGCTAGAGAAGCAGGGACTCGAAAAAAATCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCATTCCTACAGCTAGAGAAGCAGGGACTCGAAAAAAATCTTCT  350

seq1  ATGGTGCATAAATAAATGAATTAGCATTTATTTATGTGAAGGATAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCATAAATAAATGAATTAGCATTTATTTATGTGAAGGATAATGTG  400

seq1  ATTCACTGTTAGTAATAAAAAGAAGTGAGCCGTCATCAAAACATACTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGTTAGTAATAAAAAGAAGTGAGCCGTCATCAAAACATACTCTG  450

seq1  ATACATTTTCATGGAGAGTTGTAAGCATTCTACTGACTGAGTTCTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTCATGGAGAGTTGTAAGCATTCTACTGACTGAGTTCTTCCAG  500

seq1  ATGGGTAGAACTTGAAACTGCCTTCTAGTTCTATCTGTCATATTGCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAGAACTTGAAACTGCCTTCTAGTTCTATCTGTCATATTGCCTAT  550

seq1  GATAAAATTATCACATACGTTTCTGAATTGAAACATTACCCTCAGCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATTATCACATACGTTTCTGAATTGAAACATTACCCTCAGCTATA  600

seq1  GGTTTTGTTAAAAGCATAAACAATCCTCATCCTATCTATACATTCATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTAAAAGCATAAACAATCCTCATCCTATCTATACATTCATATT  650

seq1  TCTACCTTTATATTTGATGCATCCCTATACATGTCACTGTTTGCTGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTTTATATTTGATGCATCCCTATACATGTCACTGTTTGCTGGAAG  700

seq1  TAGTATTGGTGGGGTATTTTTTTATCTGTCTAGGTAGGTTAAAAAACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTGGTGGGGTATTTTTTTATCTGTCTAGGTAGGTTAAAAAACTTG  750

seq1  AGTCTCCATAAAATATCAGAGTTAAATAATGAATTC  786
      ||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCATAAAATATCAGAGTTAAATAATGAATTC  786