BAC Information

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BAC

Clone NameB6Ng01-278M11
Chromosome3 (Build37)
Map Location 59,988,671 - 59,989,351
singlet/doubletsinglet
Overlap genenone
Upstream geneP2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1
Downstream geneLOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278M11.b
ACCGA078933
length1,149
definitionB6Ng01-278M11.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttccaatgtgttgagtgccttggactgtatagtgcactcgaat
ttcccaactgacattcctgctgggatgggctttggtggtacagttgtttt
tgagtcattcctgttccagtaagtaaccctttgcccatattcctgtaaga
aacctccctaagggctggaaaggtggctcacaggttaaaagcactgactg
ttcttccaaaggtcctaaattcaattcccagcaaccacttgatggctcac
aaccatctgtaatggaatcttgtgccctcttcttgtgtgtctgaacactg
caacaaagtattatacttacataaaacaaataaataatttttttttaaaa
ggaaagaaacttcaataaaactcattggttgcctagttggactttggagg
caggtagactttggctttcatggactttctatttggggtgagtaaacggg
tgtgtgtgtgtgtgtgtgtgttcgagggagctacacaactacagtagggt
tggttctagtagtgcattagcctgttgctcaacctcagacctgtgcattt
gttttatttatttatttgttataaacaaataatttgtaataaacaaattg
tcattgcacgactaaacatagaaactcatgtatgtcagacaggcaatctc
tcattaggctacatcaccagctctgcccatttgctttcaatttatagaca
gcaagtcaggttgacagcaagtttggatgaagtggatgtgatccatctca
ctaattttcccacagtgaacctgtcagtcatggtacagcagtcagtaagc
aatacaaaaacaaagtgaaattggggtatctgtccagtggttgtactaca
gagattaacactgatgatgaaaggtcttctttttcctccatgttatgaaa
catagctatttcatggtagtatcagctaacaacaacaaaaatagcaggaa
acagatagcattttcagtgctgtgttaaggaaaatccattgcatagggca
tttgcaagagaggcagagcccacaggcaagaagatgagtgattacacctc
tctatttccctgccagatgctccttatcttgatggtctagatctcctgaa
acatataatgaattaactttcccctcctcggtactcctgacaaggtatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59988671_59989351
seq2: B6Ng01-278M11.b_521_1191

seq1  AGCTACACAACTACAGTAGGGTTGGTTCTAGTAGTGCATTAGCCTGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACACAACTACAGTAGGGTTGGTTCTAGTAGTGCATTAGCCTGTTGC  50

seq1  TCAACCTCAGACCTGTGCATTTGTTTTATTTATTTATTTGTTATAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTCAGACCTGTGCATTTGTTTTATTTATTTATTTGTTATAAACAA  100

seq1  ATAATTTGTAATAAACAAATTGTCATTGCACGACTAAACATAGAAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTAATAAACAAATTGTCATTGCACGACTAAACATAGAAACTCA  150

seq1  TGTATGTCAGACAGGCAATCTCTCATTAGGCTACATCACCAGCTCTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCAGACAGGCAATCTCTCATTAGGCTACATCACCAGCTCTGCCC  200

seq1  ATTTGCTTTCAATTTATAGACAGCAAGTCAGGTTGACAGCAAGTTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTCAATTTATAGACAGCAAGTCAGGTTGACAGCAAGTTTGGAT  250

seq1  GAAGTGGATGTGATCCATCTCACTAATTTTCCCACAGTGAACCTGTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATGTGATCCATCTCACTAATTTTCCCACAGTGAACCTGTCAGT  300

seq1  CATGGTACAGCAGTCAGTAAGCAATACAAAAACAAAGTGAAATTGGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTACAGCAGTCAGTAAGCAATACAAAAACAAAGTGAAATTGGGGTA  350

seq1  TCTGTCCAGTGGTTGTACTACAGAGATTAACACTGATGATGAAAGGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAGTGGTTGTACTACAGAGATTAACACTGATGATGAAAGGTCTT  400

seq1  CTTTTTCCTCCATGTTATGAAACATAGGCTATTTCATGGTAGTATCAGGC  450
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  CTTTTTCCTCCATGTTATGAAACATA-GCTATTTCATGGTAGTATCA-GC  448

seq1  TAACAACAACAAAAATAGCAGGAAACAGATAGCATTTTCAGGTGCTGTTG  500
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  TAACAACAACAAAAATAGCAGGAAACAGATAGCATTTTCA-GTGCTG-TG  496

seq1  TTAAGGAAAATCCATTGCATAGGGCATTTGCAAAGAGAGGCAGAGCCCAC  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTAAGGAAAATCCATTGCATAGGGCATTTGC-AAGAGAGGCAGAGCCCAC  545

seq1  AGGCA--GAGATGAGTGATTACAACTCTCTATTTCCCTGCAAGGATGCCT  598
      |||||   ||||||||||||||| |||||||||||||||| | |||||  
seq2  AGGCAAGAAGATGAGTGATTACACCTCTCTATTTCCCTGCCA-GATGC--  592

seq1  TCCTTATCTTGATGGTCTAGATCTCCTGAAACTATA-AATGAAAATAAAC  647
      |||||||||||||||||||||||||||||||| ||| ||||  ||| || 
seq2  TCCTTATCTTGATGGTCTAGATCTCCTGAAAC-ATATAATG--AATTAA-  638

seq1  CTTTCCCCTCTTCGGGTACTTCTTGACAA-GTATT  681
      |||||||||| || ||||| || |||||| |||||
seq2  CTTTCCCCTCCTC-GGTAC-TCCTGACAAGGTATT  671