BAC Information

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BAC

Clone NameB6Ng01-279A05
Chromosome3 (Build37)
Map Location 43,699,252 - 43,700,238
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039219, LOC677788, LOC100039264
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279A05.bB6Ng01-279A05.g
ACCGA079105GA079106
length1,113997
definitionB6Ng01-279A05.b B6Ng01-279A05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtttagtcctacaccccacattttattgtgttttttttttc
tttttgtggttagattcttgagttctttatatatttttgacattatccct
ctatcagatgttaggtgggtgaagattttttttctcagtctgtaggttgc
tgatttgtctaattaaatagattctttgccttacagaagctttctaattt
catgaagtccccatttatcaaatcttaattttagagcatgagccattgaa
gttctatttagaaaatttccccctgtgccaatgagttcaaggatctgtct
cactttctcttctattagattcagtgtatctggttttatgttgaggtcct
tgatccatttagacttgatctttgttcatggtgacaaacatgggtgtatt
ttcagttttctacatgcagatagccagttagaccagcaccatttattgaa
gatgctttcttttcctattgcatattttcggtttctttatcaatgatcaa
gtgtctgtaggagtatgattttatttctgggtcttcaattctatttcatt
gatcaacgtttctatctctgtaccaataccatgcagtttttatcactatt
ggtctgtagtaaagcttgaggtcagggatggtgattccccagccattctg
ttatggttgagaattgttttcgctattctaggttttttacctttgcagat
taatttgggaattgccctttcttctgttgggttcttgatggagattgcat
tcaatgcagattgccttcaataggatgggctttttttttttttttttttt
ttttttttttttttttaccaaccaatactgtttctttacctaattatttt
tttctttttctttttaaatctttttaaagtcaagttgttactcttcctcc
agatctgtcctctcatatgtcctcatctcatccccattcccctgaccccc
tgtcctcccaaagggttgccccaaagctcaatcctctccccttctggcct
taattcagttactgtttaagctgaagcagggtagtattttctccacagaa
ggcaaaaccagcatccctctgctgtaatggtggttgagtacgcttgctgc
gatgtgctacagt

gaattcatcaccaaatacatagatcatgtaagagtcaacctgtatataga
aattgagatagagaatttaatattctacacctgcagtccagaagacagtc
ttgaaaatttcttgcagagaatatgttccacttcatggactactgatcta
tgctggaggcagctgaggaaaaaaacacaatagcccatttcgtggatcaa
tagaacataacagagtagcaggtgtggaatagaggtataaagttaataat
tatttattgaataaatgtgttttagcctgatcttgcaataaaattaaaaa
aatatttatataagtaaaacattttaaaataagaattatcactgggaacg
tagtaaagaaactaaaaccaaatagtttgttcaaggtcaaaacttagttt
gtaaagttataccttgagtctaatttcacatgaagtttgtgtgtgtgtgt
gtgtgtgtgttcatgtgtgatatcctgcctaaaaatctaaccttctgaaa
attaaaacggcttaataaattatataaaaagaaaatatttaatcccttag
aagcatatcagcttaccataaatatttacaaaacatctaattattttgaa
tgttttatttggatatattttttcaaatattgaaaatatgttttaatcat
tttcaagatctcccctgtgaatttatgcattcttcacagtacataattta
ttttttttcttcaaacttgctaccatttgagactgaaagatgtaatcgtc
actggcagttgaagtcttttatttattgaacagtgggacaggctgacatc
aatggagtttcctgccaatatacttttcctacagatattaaaaacagcgt
gggcatggatgaaaatgacccccaacatggttgccactctacatgggttt
tgtcaagttcctcacaagcccactaatcactatcctgacattgaattcaa
tgaaaagttaagtcagaacaccaatatggtttcccatgtcatcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43699252_43700238
seq2: B6Ng01-279A05.g_69_1065

seq1  GAATTCATCACCAAATACATAGATCATGTAAGAGTCAACCTGTATATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACCAAATACATAGATCATGTAAGAGTCAACCTGTATATAGA  50

seq1  AATTGAGATAGAGAATTTAATATTCTACACCTGCAGTCCAGAAGACAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATAGAGAATTTAATATTCTACACCTGCAGTCCAGAAGACAGTC  100

seq1  TTGAAAATTTCTTGCAGAGAATATGTTCCACTTCATGGACTACTGATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATTTCTTGCAGAGAATATGTTCCACTTCATGGACTACTGATCTA  150

seq1  TGCTGGAGGCAGCTGAGGAAAAAAACACAATAGCCCATTTCGTGGATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGGCAGCTGAGGAAAAAAACACAATAGCCCATTTCGTGGATCAA  200

seq1  TAGAACATAACAGAGTAGCAGGTGTGGAATAGAGGTATAAAGTTAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATAACAGAGTAGCAGGTGTGGAATAGAGGTATAAAGTTAATAAT  250

seq1  TATTTATTGAATAAATGTGTTTTAGCCTGATCTTGCAATAAAATTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGAATAAATGTGTTTTAGCCTGATCTTGCAATAAAATTAAAAA  300

seq1  AATATTTATATAAGTAAAACATTTTAAAATAAGAATTATCACTGGGAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTATATAAGTAAAACATTTTAAAATAAGAATTATCACTGGGAACG  350

seq1  TAGTAAAGAAACTAAAACCAAATAGTTTGTTCAAGGTCAAAACTTAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAGAAACTAAAACCAAATAGTTTGTTCAAGGTCAAAACTTAGTTT  400

seq1  GTAAAGTTATACCTTGAGTCTAATTTCACATGAAGTTTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTTATACCTTGAGTCTAATTTCACATGAAGTTTGTGTGTGTGTGT  450

seq1  GTGTGTGTGTTCATGTGTGATATCCTGCCTAAAAATCTAACCTTCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTCATGTGTGATATCCTGCCTAAAAATCTAACCTTCTGAAA  500

seq1  ATTAAAACGGCTTAATAAATTATATAAAAAGAAAATATTTAATCCCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACGGCTTAATAAATTATATAAAAAGAAAATATTTAATCCCTTAG  550

seq1  AAGCATATCAGCTTACCATAAATATTTACAAAACATCTAATTATTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATCAGCTTACCATAAATATTTACAAAACATCTAATTATTTTGAA  600

seq1  TGTTTTATTTGGATATATTTTTTCAAATATTGAAAATATGTTTTAATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATTTGGATATATTTTTTCAAATATTGAAAATATGTTTTAATCAT  650

seq1  TTTCAAGATCTCCCCTGTGAATTTATGCATTCTTCACAGTACATAA-TTA  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCAAGATCTCCCCTGTGAATTTATGCATTCTTCACAGTACATAATTTA  700

seq1  TTTTTTTTCTTCAAACTTGCTACCATTTGAGACTGAAAGATGTAATCGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTTCAAACTTGCTACCATTTGAGACTGAAAGATGTAATCGTC  750

seq1  ACTGGCAGTTGAAGTCTTTTATTTATTGAACAGTGGGACAGGCTGACATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGTTGAAGTCTTTTATTTATTGAACAGTGGGACAGGCTGACATC  800

seq1  AATGGAGTTTCCTGCCAATATAC-TTTCCTACAGATATTAAAACCAGCGT  848
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  AATGGAGTTTCCTGCCAATATACTTTTCCTACAGATATTAAAAACAGCGT  850

seq1  GGGCATGGATGAAAATGAACCCCAACATGGT--GCACTCTACATGG--TT  894
      |||||||||||||||||| ||||||||||||   ||||||||||||  ||
seq2  GGGCATGGATGAAAATGACCCCCAACATGGTTGCCACTCTACATGGGTTT  900

seq1  TGCCAAGTTCCTCACAAG-CCACTAATCACTA-CCTGACATTG-ATTCAA  941
      || ||||||||||||||| ||||||||||||| |||||||||| ||||||
seq2  TGTCAAGTTCCTCACAAGCCCACTAATCACTATCCTGACATTGAATTCAA  950

seq1  TGAAAAGTAAAGTCAGAACACCAA-ATTGTTTCCCATGTCATCCCCT  987
      |||||||| ||||||||||||||| || |||||||||||||||||||
seq2  TGAAAAGTTAAGTCAGAACACCAATATGGTTTCCCATGTCATCCCCT  997


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