BAC Information

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BAC

Clone NameB6Ng01-279F04
Chromosome3 (Build37)
Map Location 63,234,743 - 63,387,201
singlet/doubletdoublet
Overlap genenone
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967, Mme
Downstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279F04.bB6Ng01-279F04.g
ACCGA079332GA079333
length4021,137
definitionB6Ng01-279F04.b B6Ng01-279F04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,386,794 - 63,387,201)(63,234,743 - 63,235,885)
sequence
aaatggttgttaaagagagcacggggagtgggggtgagaagctctgaatg
ctgccaggaccggggagaggagatgccaggaaacctgacagttttataat
gcctcccgagagggtggtagtgagagtccgaggagacagcgctatgcttc
ctctgtgcagcaggactttagccacctacgtctctaactcagaaggtttc
ctcttcttatgaacctggatttcgtgttttgctagattccttgaccatgg
ttagctcagaaccttcatttgggcctttggcggttggaactccgtaggtg
ggatagccttcaacagccttctgtctgtcaagccctgctgtccagacgct
ccattctctgggccttggaggtggctgagctggagcttgggaatagtgtg
tg
gaattcatagctaggagtctctgatttctagcttaaaaaacaaaagagga
gtagccaagtgcagaacctcacagctgtgattgggtccaacttattgttt
ttattaattaaaggatatatggacgttaaagtcatgcacagatgtcagca
agcgctgagttcgaagctattgccttaacaattaaaattggttttccaca
gtgggtttgaatccatcccttttgttaaatgttacccccaagaaaagaga
aatctataatccttgaatgctgaaaatcatgtcaggaactttatctgtca
taatcttttttcctgtgggtttagttttatcatttgttttgaggtgggtt
ctaactatgtagcccaagctggccttgaagtcctcctacctcagtttttt
gagagatggattacaggtgtggagaacaactggttactgtgtttgctgag
caaagtctgcccacgggccatggaaactggatatcatgctctcatcttga
caggaaaactgaagattagagaaattgtagaatgagtccaaagacattca
gtatgtaagtgttggaaaagcactcagcgttcattaagtgagatctttct
atagagaagaaaaaggttgtatcagcttcctctctgtggtccttagaaaa
agcccacgattgcttaaagactatattatcaaacaacttcagtctgccta
cttttaatttacattgtatgaaatattatttcagacatgtgtgaggagcc
tatctttccaagcatagtttcctgtctttttatctccttatatccactcg
ggaatttaatccacaagttctatctccctcatggtgcctgcctctaccaa
gagaggaaaagatgcctgccttgttctctatcatatcaccaaagcttgca
acactaaagtgttcagccagtgtttgctgaatgataaccgaattagtgat
ttcttcattcttactgaccagtttccttcacaactttcctcagttgacat
ttttcttcttatttcagattctagatatatttggtataatgctagtcgag
catagctctgtaatacattactcaggggctaggagagatggtcttgtgtg
aagcattggctctggcgaagatccagttcagttccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63386794_63387201
seq2: B6Ng01-279F04.b_44_451 (reverse)

seq1  CACACACTATTCCCAAGCTCCAGCTCAGCCACCTCCAAGGCCCAGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTATTCCCAAGCTCCAGCTCAGCCACCTCCAAGGCCCAGAGAAT  50

seq1  GGAGCGTCTGGACAGCAGGGCTTGACAGACAGAAGGCTGTTGAAGGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGTCTGGACAGCAGGGCTTGACAGACAGAAGGCTGTTGAAGGCTAT  100

seq1  CCCACCTACGGAGTTCCAACCGCCAAAGGCCCAAATGAAGGTTCTGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTACGGAGTTCCAACCGCCAAAGGCCCAAATGAAGGTTCTGAGCT  150

seq1  AACCATGGTCAAGGAATCTAGCAAAACACGAAATCCAGGTTCATAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGTCAAGGAATCTAGCAAAACACGAAATCCAGGTTCATAAGAAG  200

seq1  AGGAAACCTTCTGAGTTAGAGACGTAGGTGGCTAAAGTCCTGCTGCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCTTCTGAGTTAGAGACGTAGGTGGCTAAAGTCCTGCTGCACAG  250

seq1  AGGAAGCATAGCGCTGTCTCCTCGGACTCTCACTACCACCCTCTCGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCATAGCGCTGTCTCCTCGGACTCTCACTACCACCCTCTCGGGAG  300

seq1  GCATTATAAAACTGTCAGGTTTCCTGGCATCTCCTCTCCCCGGTCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATAAAACTGTCAGGTTTCCTGGCATCTCCTCTCCCCGGTCCTGGC  350

seq1  AGCATTCAGAGCTTCTCACCCCCACTCCCCGTGCTCTCTTTAACAACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCAGAGCTTCTCACCCCCACTCCCCGTGCTCTCTTTAACAACCAT  400

seq1  TTGAATTC  408
      ||||||||
seq2  TTGAATTC  408

seq1: chr3_63234743_63235885
seq2: B6Ng01-279F04.g_65_1201

seq1  GAATTCATAGCTAGGAGTCTCTGATTTCTAGCTTAAAAAACAAAAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCTAGGAGTCTCTGATTTCTAGCTTAAAAAACAAAAGAGGA  50

seq1  GTAGCCAAGTGCAGAACCTCACAGCTGTGATTGGGTCCAACTTATTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAAGTGCAGAACCTCACAGCTGTGATTGGGTCCAACTTATTGTTT  100

seq1  TTATTAATTAAAGGATATATGGACGTTAAAGTCATGCACAGATGTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTAAAGGATATATGGACGTTAAAGTCATGCACAGATGTCAGCA  150

seq1  AGCGCTGAGTTCGAAGCTATTGCCTTAACAATTAAAATTGGTTTTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTGAGTTCGAAGCTATTGCCTTAACAATTAAAATTGGTTTTCCACA  200

seq1  GTGGGTTTGAATCCATCCCTTTTGTTAAATGTTACCCCCAAGAAAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTGAATCCATCCCTTTTGTTAAATGTTACCCCCAAGAAAAGAGA  250

seq1  AATCTATAATCCTTGAATGCTGAAAATCATGTCAGGAACTTTATCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATAATCCTTGAATGCTGAAAATCATGTCAGGAACTTTATCTGTCA  300

seq1  TAATCTTTTTTCCTGTGGGTTTAGTTTTATCATTTGTTTTGAGGTGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTTTTCCTGTGGGTTTAGTTTTATCATTTGTTTTGAGGTGGGTT  350

seq1  CTAACTATGTAGCCCAAGCTGGCCTTGAAGTCCTCCTACCTCAGTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTATGTAGCCCAAGCTGGCCTTGAAGTCCTCCTACCTCAGTTTTTT  400

seq1  GAGAGATGGATTACAGGTGTGGAGAACAACTGGTTACTGTGTTTGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGATTACAGGTGTGGAGAACAACTGGTTACTGTGTTTGCTGAG  450

seq1  CAAAGTCTGCCCACGGGCCATGGAAACTGGATATCATGCTCTCATCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTGCCCACGGGCCATGGAAACTGGATATCATGCTCTCATCTTGA  500

seq1  CAGGAAAACTGAAGATTAGAGAAATTGTAGAATGAGTCCAAAGACATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAACTGAAGATTAGAGAAATTGTAGAATGAGTCCAAAGACATTCA  550

seq1  GTATGTAAGTGTTGGAAAAGCACTCAGCGTTCATTAAGTGAGATCTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAAGTGTTGGAAAAGCACTCAGCGTTCATTAAGTGAGATCTTTCT  600

seq1  ATAGAGAAGAAAAAGGTTGTATCAGCTTCCTCTCTGTGGTCCTTAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAGAAAAAGGTTGTATCAGCTTCCTCTCTGTGGTCCTTAGAAAA  650

seq1  AGCCCACGATTGCTTAAAGACTATATTATCAAACAACTTCAGTCTGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACGATTGCTTAAAGACTATATTATCAAACAACTTCAGTCTGCCTA  700

seq1  CTTTTAATTTACATTGTATGAAATATTATTTCAGACATGTGTGAGGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTTACATTGTATGAAATATTATTTCAGACATGTGTGAGGAGCC  750

seq1  TATCTTTCCAAGCATAGTTTCCTGTCTTTTTATCTCCTTATATCCACTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTCCAAGCATAGTTTCCTGTCTTTTTATCTCCTTATATCCACTCG  800

seq1  GGAATTTAATCCACAAGTTCTATCTCCCTCATGGTGCCTGCCTCTACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTAATCCACAAGTTCTATCTCCCTCATGGTGCCTGCCTCTACCAA  850

seq1  GAGAGGAAAAGATGCCTGCCTTGTTCTCTATCATATCACCAAAGCTTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAAAGATGCCTGCCTTGTTCTCTATCATATCACCAAAGCTTGCA  900

seq1  ACACTAAAGTGTTCAGCCAGTGTTTGCTGAATGAATAACCGAATTAGTGA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACACTAAAGTGTTCAGCCAGTGTTTGCTGAATG-ATAACCGAATTAGTGA  949

seq1  TTTCTTCATTCTTACTGACCAGTTTCCTTCACAAC-TTCCTCAGGTTGAC  999
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  TTTCTTCATTCTTACTGACCAGTTTCCTTCACAACTTTCCTCA-GTTGAC  998

seq1  A-TTTTCTTCTTATTTCAGATTCTAGATATATTTGGTATAATTGCTAGTC  1048
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTTTTCTTCTTATTTCAGATTCTAGATATATTTGGTATAA-TGCTAGTC  1047

seq1  GAGCATAGCTCTGTAATACAATAACTCAGGGGCTA-GAGAGATGGGTCTG  1097
      ||||||||||||||||||| || |||||||||||| |||||||||   ||
seq2  GAGCATAGCTCTGTAATAC-ATTACTCAGGGGCTAGGAGAGATGGTCTTG  1096

seq1  TGGTTGAGAGCATTTGCTCTTGCAGAGGATCCAGGTTCAGTTCCCA  1143
      ||  ||| |||||| ||||| || || |||||| ||||||||||||
seq2  TG--TGA-AGCATTGGCTCTGGC-GAAGATCCA-GTTCAGTTCCCA  1137