BAC Information

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BAC

Clone NameB6Ng01-279G18
Chromosome3 (Build37)
Map Location 6,124,007 - 6,124,527
singlet/doubletsinglet
Overlap genenone
Upstream geneZfhx4, Pxmp3, EG620382, EG667759, LOC100041165
Downstream geneLOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279G18.bB6Ng01-279G18.g
ACCGA079408GA079409
length1,193836
definitionB6Ng01-279G18.b B6Ng01-279G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggttacttggcattatcagaactcagttctcccactaaagcc
aaccctggataatccaagacattggaaaaaacaagactctgatttaaaat
cacatctcatgatgatgatagaagattttaagaaagacataaataaatcc
cttaaaaaatacaggagaatacaagtaaacaagtagatgcccctagagag
gaaacacacacacacacacacacacacacacacacacacacacacaaatc
ctttaaagaattataggaaaacacaatcaaacaggagaaggaattgaaca
aatccattgaggatcaaaaatggaaatagaaacaataaagaaatcacaaa
ggaagactacactggagatagaaaacctaggaaagagatcaggagtcata
gatgcaagcatcaccaacagaatacaagagatagaggagagaatctcagg
ggcagatgataccatagtaaagaatgacacaacagttaaagaaattacaa
aaggttcttaactgaaaatatccaggaaatccagaacacaatgagaagac
ataataaggataataggtgtagaagagactgaagaatcccaacttaaagg
gccagtaaatatcttcaacaaaattatagaagaaaacttccctaacataa
agaaaaagatgtccataagcatacaagaagtctatataacataaaaaaga
ctggaccaggaaaggaatccctcctatcacataatagtcaaaacactaaa
tgcacaaaacaaagaaagaatattaaatgtagtgagggaaaaagtttaag
taacatataaatgcaaaccaaacagaattatgccacacttctcaccagag
actgtgaaagctagaagatcctgggcagatgtcatacagaccataaaaga
aaacaatgctgacccaggttactatatccagcaaaactccaaattaccac
agatggagaaaccaagacattccatgacaaaaaaaatgcacagtatcttt
ccacaatcccagcttcccatgataatacataagaaaaactccacacagga
gggaaaatacacctctagagaagcaagaatttattcttttctacaaccag
gagaagaagctaaacacatattcgacttctaaaaccaaattaccgaagca
catcagaattctagtttcctctcaacaatcaaatggggaactc
gaattcagtctgatttttgttttgtgaaagagttctttcattctgacagt
atggtcaagagtctgtgaagggagcaaaattgatttgaaagagattactt
taagaattcatttattggctaagatcaaaaactcaggtgacagcagatgt
tgacaaggaggtggtaaaagaggagcactcctccattgttgatgggtctg
taagctggtacaaccattgtggaactcaatcttgtggttctcagaaaagt
ggacatagtattacccaaggacccagtatacactcctagacatataccca
aaagattctccaacatataataacaagagcacatgctccatcatgttcat
aacagatttatttataatagccagaagctggaaagaacccagatgtccct
ctaacagaagaatggatagagaaaatgtggtacatttacacagtagagca
ctactcagctattaaaaagatgaatttatgaaattcttaggcaaatgtat
ggaactagaaaataacatgctgagtgaggtaatccaatcacaaaagaaca
cacatggtatgcatttattgataagtggatattaggccaaaagctcaaaa
aacccaagacacaattcacagaccacataaagctcaagaagaaagaagaa
caacgtgtgggtgcctcagtcctttttagaaaggggaacacactcataga
agtagggggacagggatgggatagagggtttctgggagggatggaaactg
ggaaaaggggattacattttgatatataacttaaagaaactttccaataa
aaaaatgacaaaaatattttaagtaaaatgtaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6124007_6124527
seq2: B6Ng01-279G18.g_377_901 (reverse)

seq1  AGCTTACATTTTACTTAAAATATTTTTATC-TTTTTTTATTGGATATTTT  49
      ||||||||||||||||||||||||||| || ||||||||||||| | |||
seq2  AGCTTACATTTTACTTAAAATATTTTTGTCATTTTTTTATTGGAAAGTTT  50

seq1  CTTT-AGTTATATTTC-AAATGTTATCCCC-TTTCCCAGTTTCCATCCCT  96
      |||| |||||||| || |||||| |||||| |||||||||||||||||||
seq2  CTTTAAGTTATATATCAAAATGTAATCCCCTTTTCCCAGTTTCCATCCCT  100

seq1  CCCAGAAACCCTCTATCCCATCCCTGTCCCCCTACTTCTATGAGTGTGTT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAACCCTCTATCCCATCCCTGTCCCCCTACTTCTATGAGTGTGTT  150

seq1  CCCCTTTCTAAAAAGGACTGAGGCACCCACACGTTGTTCTTCTTTCTTCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCTAAAAAGGACTGAGGCACCCACACGTTGTTCTTCTTTCTTCT  200

seq1  TGAGCTTTATGTGGTCTGTGAATTGTGTCTTGGGTTTTTTGAGCTTTTGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTATGTGGTCTGTGAATTGTGTCTTGGGTTTTTTGAGCTTTTGG  250

seq1  CCTAATATCCACTTATCAATAAATGCATACCATGTGTGTTCTTTTGTGAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATATCCACTTATCAATAAATGCATACCATGTGTGTTCTTTTGTGAT  300

seq1  TGGATTACCTCACTCAGCATGTTATTTTCTAGTTCCATACATTTGCCTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTACCTCACTCAGCATGTTATTTTCTAGTTCCATACATTTGCCTAA  350

seq1  GAATTTCATAAATTCATCTTTTTAATAGCTGAGTAGTGCTCTACTGTGTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATAAATTCATCTTTTTAATAGCTGAGTAGTGCTCTACTGTGTA  400

seq1  AATGTACCACATTTTCTCTATCCATTCTTCTGTTAGAGGGACATCTGGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCACATTTTCTCTATCCATTCTTCTGTTAGAGGGACATCTGGGT  450

seq1  TCTTTCCAGCTTCTGGCTATTATAAATAAATCTGTTATGAACATGATGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTTCTGGCTATTATAAATAAATCTGTTATGAACATGATGGA  500

seq1  GCATGTGCTCTTGTTATTATATGTT  521
      |||||||||||||||||||||||||
seq2  GCATGTGCTCTTGTTATTATATGTT  525