BAC Information

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BAC

Clone NameB6Ng01-280D01
Chromosome3 (Build37)
Map Location 10,671,799 - 10,672,944
singlet/doubletsinglet
Overlap genenone
Upstream genePag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4, 1700008G05Rik, Impa1, Slc10a5, Zfand1, Chmp4c, Snx16
Downstream geneLOC670564, LOC383826, EG667978, LOC667999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280D01.bB6Ng01-280D01.g
ACCGA079980GA079981
length1,1561,007
definitionB6Ng01-280D01.b B6Ng01-280D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattaataaatgctctgctcttgtggcctagttatcacccaaag
gcctgcctcttcttgccttaaacattctgatttcaacataagaatgttcg
gcacacacaacgcatgaatattcagttgatctcagttgctgtaaaatctt
catttacttcactaaaatacatatataattaattgaaaatactttattct
ctgaaaggcacacaatttcttccagatttctttgtatatctctttctatt
ttaagtgttctctttgtacaacagtctgacaaacagcttaacttaaattt
gagcatgcctccatgaagagcagaaaagacttgaaaaatcaggaaacaaa
aaaatgtagattgattggttgtttgtttgattgattgattttgctaaaag
tgctttaaggtttgagttctcacatagcagtttctatgacccagcagatt
ccctttgccactaaactataagtatgtttggaacaactcctttcaccttc
catccacccctaattcaagagccctctgcagcttaaatgcagatgtagaa
aacagactacagagcagactctagttgcattgcaattgtcattcagaact
gtgttttggtttcctctcctttctattttgtctatggatacccaatcgtg
tattatgttttcagtcttttgaaaagtaagaccttcagtttgacatttag
cctaggtgttactttccaacccccttgctgaaaattagaaaaatcagctg
cattattatatttcccttgatttcacatttcagcttagtctgtccatcat
tcataaaccagtgtcagacccaggagtttacacaactgtcaatgtcactg
cttgctgcggtgtgtaatgtactataaacatgtttctgcgataaggaaat
aattgtaattactggtgtctgtttttaggaaaaccaatgactttacgttt
gtatttgacagtctccatgatgcctcagtcatgtacgattaattattctg
aacctggtggacttgcttgcatgggctggattctaggtacataagacaaa
gatagatccatgtattccttccatggtgaatattgaataggaatcccatg
aagaaacctttcactccagtacctttgaaaggccatcaatggcttggcaa
gagaga
gaattctttgttttctccatctatggtaattgagagttttgctgggtata
gtagcctgggctggcatttgtgttctgttagggtctgtataacatctgtc
caggatcttctggctttcatagtctctagtgagaagtctgatgtaattca
aataggcctgcctttatatgttacttgaccttttctccttattcctttta
atattctatccttatttagtgcatttgttgttctgatcattatgtgatag
aaggaagttcttttctggtccagtctatttggagttctgtaggcctcttc
tatgctcatgtgaatctcttatggaagttttcttctaaaattttgttgaa
gatatttatttgcctttaagttgaaaatcttcattctcttctatacctac
tatctgtaggtttggtcttctcattatgtcctggatttcctgggtgtttt
gggttggagctttttgcattttctttgattgttgtttccatgttttctat
ggaatcttctgcacctgagattctctcttccatctcttctattctgttgc
tgattctctcatctatggttccagatttctttcctatgatttctatctcc
agagttgtctccctttgggatttctgtattgtttctacttccagttttag
atcttggatggttttgttcaattcttttccatttcttagtgttttcctat
aactttttaagggatttttgtgtttcctctttaagggcttctagctgttt
acctgtgttttcctgtatatctttaaggagttatttatttccttcttaaa
gttctccatcattattttgagaaatgagtttagatccatatcttgctttt
ctggtgtgatggtgtatccaggacttgctatggtggggagagtttggttc
tgatgatttcaagtaactttgctttctgttgattcctgttcttggtattg
cctcctgccatctgattatctcaagtgcttggcctgccctccagtatatc
tgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10671799_10672944
seq2: B6Ng01-280D01.b_48_1203 (reverse)

seq1  TCTCTCTTGGCAAG-CAATGATGG-CTTTCAAGGGTACT-GAGTGAA--G  45
      ||||||||| |||| || |||||| ||||||| |||||| |||||||  |
seq2  TCTCTCTTGCCAAGCCATTGATGGCCTTTCAAAGGTACTGGAGTGAAAGG  50

seq1  TTTC-TCATGGG-TTCCTCT--CATATTTCACATTGAA-GAATACATGGA  90
      |||| ||||||| ||||| |   |||||   ||| ||| |||||||||||
seq2  TTTCTTCATGGGATTCCTATTCAATATTCACCATGGAAGGAATACATGGA  100

seq1  TCTATCTTTGTCTTTATGTACCTAGAATCCAG-CCATGCAAAGCAAGGTC  139
      |||||||||||| ||||||||||||||||||| |||||| |||||| |||
seq2  TCTATCTTTGTC-TTATGTACCTAGAATCCAGCCCATGC-AAGCAA-GTC  147

seq1  CA-CAGGTTCAGAATAATTAATCGTAACATGACTGA-GCATCATGGAGAC  187
      || |||||||||||||||||||||| |||||||||| |||||||||||||
seq2  CACCAGGTTCAGAATAATTAATCGT-ACATGACTGAGGCATCATGGAGAC  196

seq1  TGTCAAATACAAACGTAAAGTCATTGGTTTTCCTAAAAACAGACA-CAGT  236
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTCAAATACAAACGTAAAGTCATTGGTTTTCCTAAAAACAGACACCAGT  246

seq1  AATTACAATTATTTCCTTATCGCAGAAACATGTTTATAGTACATTACACA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAATTATTTCCTTATCGCAGAAACATGTTTATAGTACATTACACA  296

seq1  CCGCAGCAAGCAGTGACATTGACAGTTGTGTAAACTCCTGGGTCTGACAC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGCAAGCAGTGACATTGACAGTTGTGTAAACTCCTGGGTCTGACAC  346

seq1  TGGTTTATGAATGATGGACAGACTAAGCTGAAATGTGAAATCAAGGGAAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATGAATGATGGACAGACTAAGCTGAAATGTGAAATCAAGGGAAA  396

seq1  TATAATAATGCAGCTGATTTTTCTAATTTTCAGCAAGGGGGTTGGAAAGT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATGCAGCTGATTTTTCTAATTTTCAGCAAGGGGGTTGGAAAGT  446

seq1  AACACCTAGGCTAAATGTCAAACTGAAGGTCTTACTTTTCAAAAGACTGA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTAGGCTAAATGTCAAACTGAAGGTCTTACTTTTCAAAAGACTGA  496

seq1  AAACATAATACACGATTGGGTATCCATAGACAAAATAGAAAGGAGAGGAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAATACACGATTGGGTATCCATAGACAAAATAGAAAGGAGAGGAA  546

seq1  ACCAAAACACAGTTCTGAATGACAATTGCAATGCAACTAGAGTCTGCTCT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACACAGTTCTGAATGACAATTGCAATGCAACTAGAGTCTGCTCT  596

seq1  GTAGTCTGTTTTCTACATCTGCATTTAAGCTGCAGAGGGCTCTTGAATTA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTGTTTTCTACATCTGCATTTAAGCTGCAGAGGGCTCTTGAATTA  646

seq1  GGGGTGGATGGAAGGTGAAAGGAGTTGTTCCAAACATACTTATAGTTTAG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGATGGAAGGTGAAAGGAGTTGTTCCAAACATACTTATAGTTTAG  696

seq1  TGGCAAAGGGAATCTGCTGGGTCATAGAAACTGCTATGTGAGAACTCAAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGGGAATCTGCTGGGTCATAGAAACTGCTATGTGAGAACTCAAA  746

seq1  CCTTAAAGCACTTTTAGCAAAATCAATCAATCAAACAAACAACCAATCAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAGCACTTTTAGCAAAATCAATCAATCAAACAAACAACCAATCAA  796

seq1  TCTACATTTTTTTGTTTCCTGATTTTTCAAGTCTTTTCTGCTCTTCATGG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTTTTTTGTTTCCTGATTTTTCAAGTCTTTTCTGCTCTTCATGG  846

seq1  AGGCATGCTCAAATTTAAGTTAAGCTGTTTGTCAGACTGTTGTACAAAGA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCTCAAATTTAAGTTAAGCTGTTTGTCAGACTGTTGTACAAAGA  896

seq1  GAACACTTAAAATAGAAAGAGATATACAAAGAAATCTGGAAGAAATTGTG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTAAAATAGAAAGAGATATACAAAGAAATCTGGAAGAAATTGTG  946

seq1  TGCCTTTCAGAGAATAAAGTATTTTCAATTAATTATATATGTATTTTAGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCAGAGAATAAAGTATTTTCAATTAATTATATATGTATTTTAGT  996

seq1  GAAGTAAATGAAGATTTTACAGCAACTGAGATCAACTGAATATTCATGCG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAATGAAGATTTTACAGCAACTGAGATCAACTGAATATTCATGCG  1046

seq1  TTGTGTGTGCCGAACATTCTTATGTTGAAATCAGAATGTTTAAGGCAAGA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGCCGAACATTCTTATGTTGAAATCAGAATGTTTAAGGCAAGA  1096

seq1  AGAGGCAGGCCTTTGGGTGATAACTAGGCCACAAGAGCAGAGCATTTATT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCCTTTGGGTGATAACTAGGCCACAAGAGCAGAGCATTTATT  1146

seq1  AATGGAATTC  1146
      ||||||||||
seq2  AATGGAATTC  1156