MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-281O11
Chromosome	3 (Build37)
Map Location	55,253,580 - 55,371,175
singlet/doublet	doublet
Overlap gene	Dclk1
Upstream gene	LOC100039951, LOC434807, B020017C02Rik, D3Ertd300e, Exosc8, Alg5, Smad9, Rfxap, LOC545524, 6030405A18Rik, Ccna1, 4931419H13Rik, Spg20, A730037C10Rik, Sohlh2
Downstream gene	Mab21l1, 4933417G07Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039951 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC434807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434807
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	B020017C02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212507 MGI:3588285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins

name	D3Ertd300e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56790 MGI:1929651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exosc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69639 MGI:1916889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66248 MGI:1913498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55994 MGI:1859993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfxap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170767 MGI:2180854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545524
definition	note : splicing factor, arginine/serine-rich 10-like pseudo : _no_value

name	6030405A18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329641 MGI:3607715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12427 MGI:108042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931419H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70970 MGI:1918220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Spg20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229285 MGI:2139806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A730037C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320604 MGI:2444356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sohlh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74434 MGI:1921684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dclk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mab21l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17116 MGI:1333773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933417G07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins

name	B020017C02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369558 GeneID:212507 MGI:3588285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : RIKEN cDNA B020017C02 gene transcript_id : XM_143238.5

name	D3Ertd300e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367198 GeneID:56790 MGI:1929651
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 3, ERATO Doi 300, expressed transcript_id : NM_019995.2

name	Exosc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254485 GeneID:69639 MGI:1916889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exosome component 8 transcript_id : NM_027148.2

name	Alg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370271 GeneID:66248 MGI:1913498
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase) transcript_id : NM_025442.2

name	Smad9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802048 GeneID:55994 MGI:1859993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 9 (Drosophila) transcript_id : NM_019483.4

name	Rfxap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133930776 GeneID:170767 MGI:2180854
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X-associated protein transcript_id : NM_133231.2

name	6030405A18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353393 GeneID:329641 MGI:3607715
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030405A18 gene transcript_id : NM_177854.3

name	Ccna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802415 GeneID:12427 MGI:108042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin A1 transcript_id : NM_007628.2

name	4931419H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251155 GeneID:70970 MGI:1918220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931419H13 gene transcript_id : XM_001473883.1

name	Spg20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450268 GeneID:229285 MGI:2139806
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) transcript_id : NM_144895.1

name	A730037C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28893224 GeneID:320604 MGI:2444356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A730037C10 gene transcript_id : NM_177203.1

name	Sohlh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802936 GeneID:74434 MGI:1921684
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis and oogenesis specific basic helix-loop-helix 2 transcript_id : NM_028937.2

name	Dclk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130532 GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublecortin-like kinase 1 transcript_id : NM_019978.2

name	Mab21l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560806 GeneID:17116 MGI:1333773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mab-21-like 1 (C. elegans) transcript_id : NM_010750.2

name	B020017C02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38076535 GeneID:212507 MGI:3588285
definition	codon_start : 1 product : similar to REX1, RNA exonuclease 1 homolog (S. cerevisiae) protein_id : XP_143238.2

name	D3Ertd300e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910330 GeneID:56790 MGI:1929651
definition	codon_start : 1 note : p38 interacting protein; transcription factor (p38 interacting protein) product : hypothetical protein LOC56790 protein_id : NP_064379.1

name	Exosc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254486 CCDS:CCDS17352.1 GeneID:69639 MGI:1916889
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CBP-interacting protein 3 protein_id : NP_081424.2

name	Alg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21728372 CCDS:CCDS17353.1 GeneID:66248 MGI:1913498
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004581 - dolichyl-phosphate beta-glucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP] codon_start : 1 note : Alg5 homolog product : dolichyl-phosphatebeta-glucosyltransferase-like protein_id : NP_079718.1

name	Smad9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490384 CCDS:CCDS17354.1 GeneID:55994 MGI:1859993
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030902 - hindbrain development [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : MAD homolog 9 protein_id : NP_062356.3

name	Rfxap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875392 GeneID:170767 MGI:2180854
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] codon_start : 1 exception : alternative start codon note : non-AUG (ACG) translation initiation codon product : regulatory factor X-associated protein protein_id : NP_573494.1 transl_except : (pos:complement(54611595..54611597),aa:Met)

name	6030405A18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244446 CCDS:CCDS17355.1 GeneID:329641 MGI:3607715
definition	codon_start : 1 product : hypothetical protein LOC329641 protein_id : NP_808522.1

name	Ccna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680864 CCDS:CCDS17356.1 GeneID:12427 MGI:108042
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin A1 protein_id : NP_031654.1

name	4931419H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251156 GeneID:70970 MGI:1918220
definition	codon_start : 1 product : hypothetical protein LOC70970 protein_id : XP_001473933.1

name	Spg20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450269 GeneID:229285 MGI:2139806
definition	codon_start : 1 product : spastic paraplegia 20, spartin (Troyer syndrome) homolog protein_id : NP_659144.1

name	A730037C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893225 CCDS:CCDS17357.1 GeneID:320604 MGI:2444356
definition	codon_start : 1 product : hypothetical protein LOC320604 protein_id : NP_796177.1

name	Sohlh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312740 CCDS:CCDS17358.1 GeneID:74434 MGI:1921684
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : spermatogenesis and oogenesis specific basic helix-loop-helix 2 protein_id : NP_083213.1

name	Dclk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910164 CCDS:CCDS17359.1 GeneID:13175 MGI:1330861
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : doublecortin-like kinase; CLICK-I beta; doublecortin and calcium/calmodulin-dependent protein kinase-like 1 product : double cortin and calcium/calmodulin-dependent protein kinase-like 1 protein_id : NP_064362.1

name	Mab21l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754598 CCDS:CCDS17360.1 GeneID:17116 MGI:1333773
definition	GO_process : GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] codon_start : 1 product : mab-21-like 1 protein_id : NP_034880.1

name	LOC100039951 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039951
definition	number : 2 pseudo : _no_value

name	LOC100039951 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039951
definition	number : 1 pseudo : _no_value

name	4933417G07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369549 GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins product : RIKEN cDNA 4933417G07 gene transcript_id : XR_002339.1

clone name	MSMg01-135N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-281O11.b	B6Ng01-281O11.g
ACC	GA081260	GA081261
length	1,139	1,116
definition	B6Ng01-281O11.b	B6Ng01-281O11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(55,370,046 - 55,371,175)	(55,253,580 - 55,254,702)
sequence	gaattccataattaaaggttcaagtcattaatgtttctaaatggatccaa ttacataatttaccacctaccatcatcagctttaggaatataagaacaaa tctactttaatataagggaaccacatgtaatttcctattgtccttgacag tgatgcctgttccatagccatttcacgctctggtctaaaaacatgtttgt gttttgtttcataagtgttttgtgcttactgttttgactgtgttaccaca tgttagcatgtttctgtaatagactcatctatgtccatgtgtatacttac atgtgtaggtttgggtactaaagatattagcactgaaagaaatgatgagc ttaaaatgtttaatttattttgtattttaagacaaggattcagctgggca tgctagtacatgcctttaactccagtactcaagaggcagaggcaagcaga tctctgtgaatttgaggccagcctggtctgcaaagggagttccaaaaagg ccagaccagtgacacagaaaaaccctgttttggaaaacaaaacaaaagac agaataaaatagatttcactgtataacctaagccattctagaacttgata tgcagcccaggctagtattgaatacaatagacccctgccttagcctcctc agtgctgggattgcaggtacatagtattataccagctacattttattctt tattggaattttctaataaaatgcaaaaacctatgactttagtttttctt ttttctctttctttctttctttctttctttcttttctttctttcttcctt ccttccttccttccttccttccttccttcctttctttctttctttctttc tttctttctttcttcctttcttccctttctttcttttttcttttttcttt tttttttttatcatgctgggattcaatccccagggccaatacatgcaagg cagcactttagctctaagatccaaccttagcatatcaactaaactcttac aggtcttcatggaatggaagggggaagggccttttgctttggaccctcac aagcaacccttcctgcctcatctgagtgctagcattacaggggtaccacc catgcctgcttttgtcttaccatggttttggtgccttgg	gaattctccgtgtggcaaaatgcttgacagctaccaaatgccagtgtgta aaggcccatgagttagtttgcttttctgttgctgtgacagagaccatgca acctgaggatcaaaggtttatttggagtattcatcccccaataccacttc catcactgagggaagccaaggggataactcaagtggggcaggaacctgga ggcacgaactgaagctgagaccgtggaggagtgctggtcattgatttgtt ccttgggttgtgctcagcttgcttttttataccacccaaaaccaccttgt ccagaggtggcactagctatagtgggctggactataccacatcaatcatc agtcaaggagatgtgacacagacatgctctcgggccaattcaatgcaggc ttttctcaactgaagttccctcttcccaaatggttctagcttatgtcaag ttgagaaaaaaaatttaactagcactcccaagagctacttgaagcgaaag agggttagccacagaacactaggtagatcaacttccttgttacttaaaaa tacaaatgattagaaaaatattctagaactttaaaaagaaggcataattt gatcatgggttatcagggaatcttagtatacatatttttaatctaattga ttatcatttcaaaaaatgttttaaatataaactatggattcttggaagca agatgttgtgcatttacatgtcataattaatccagacctttcacgaagac aaaaatagggctttttaaaaaattatttacagtacttagcactgaatgta atgaacatgagaactgagagtttacgtatagaggagactgtttttcatct tcacagaaaggcactcttatagatgcaaagccagcttccttgcagcttcc tgatggtatattgaaaggtcaccatgtccttgtaagaaggaccaattaca cctgatttccagtgttacccactctagctcccacatatcacactgatgca ttatcccaatcgggccaggaacaatacacaggggctgtcaagtggggtgg gaggcttccctcacatgtctttccttgtaagtgaacgttctacgtttaat ttggcaaaaaatcatg
quality values	Open. Hide. 58 33 46 30 58 58 31 20 58 58 58 54 45 62 62 54 62 47 27 62 37 26 47 62 62 47 62 62 62 62 62 47 47 43 34 38 56 44 56 56 62 59 62 62 59 59 62 59 44 62 62 59 62 62 62 62 49 62 62 62 59 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 59 49 42 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 47 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 47 56 62 42 62 62 53 62 62 47 62 62 62 62 52 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 58 52 54 58 58 52 54 49 58 54 58 54 54 54 58 58 58 58 58 54 54 58 58 58 58 52 58 58 58 54 41 58 58 58 58 58 54 54 41 52 58 45 52 58 58 58 58 54 54 58 58 54 54 58 58 41 54 54 42 58 54 58 52 54 58 47 58 46 58 58 58 54 58 52 54 53 58 58 54 51 49 40 53 47 49 50 58 52 46 38 58 58 58 52 58 51 48 48 50 51 42 58 54 52 47 51 50 50 50 50 52 58 52 49 39 58 51 37 24 49 47 50 50 41 58 39 50 49 39 58 58 41 54 52 52 53 53 53 46 43 41 35 51 51 41 33 41 34 50 58 54 35 50 40 58 52 42 58 38 49 42 44 49 41 54 53 29 58 58 51 52 39 52 50 50 42 58 58 43 50 51 39 42 53 58 58 23 51 54 50 52 38 50 49 29 38 54 38 52 45 53 54 51 51 32 54 21 50 52 52 52 39 54 23 54 29 30 25 51 39 42 29 54 32 50 21 51 47 29 28 44 29 50 35 54 27 44 28 33 6 30 44 7 25 14 38 25 51 33 44 31 51 31 33 53 46 51 39 34 46 45 37 37 32 38 44 28 29 35 21 13 11 10 17 12 29 33 34 25 38 12 27 41 32 35 34 24 28 36 53 45 38 13 32 32 40 32 35 18 18 9 9 18 30 21 22 15 32 23 52 25 51 27 45 29 33 23 45 27 46 30 29 36 25 22 37 5 19 22 33 21 46 12 25 41 20 41 23 45 32 51 21 40 37 31 25 27 32 20 37 32 42 31 33 46 32 42 24 32 25 30 31 28 42 42 42 33 30 13 31 25 23 38 38 31 35 46 32 20 10 43 28 6 24 14 15 42 41 16 20 31 41 31 14 19 22 30 32 35 30 11 25 37 27 31 32 31 39 11 46 16 15 19 31 32 30 33 33 18 32 32 33 22 22 34 20 33 22 22 33 13 19 25 22 32 33 35 29 16 25 28 38 20 15 14 30 31 24 43 44 44 25 34 38 22 33 19 27 13 29 33 27 35 22 28 18 18 25 21 11 37 18 18 17 15 21 21 9 31 37 25 16 22 19 7 30 24 8 10 39 31 37 17 17 10 29 37 18 9 14 24 18 34 10 21 15 11 12 6 5 5 6 5 23 22 39 22 15 9 5 15 24 7 20 12 12 10 6 5 4 4 7 7 6 5 8 6 3 6 7 14 9 19 15 13 14 10 13 13 10 9 5 3 6 8 7 5 4 15 11 27 14 13 8 6 6 18 21 29 32 21 13 14 6 5 8 6 7 11 8 6 5 4 11 26 17 8 7 6 6 18 7 11 18 12 11 4	Open. Hide. 62 47 51 44 62 62 62 62 62 51 34 43 25 28 21 25 22 25 32 34 44 43 62 62 62 62 59 59 59 62 62 59 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 42 42 54 46 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 59 59 62 59 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 46 58 52 52 54 58 58 58 58 58 58 58 54 58 54 58 58 58 54 58 54 58 58 54 58 58 58 58 54 52 58 58 58 58 58 54 54 58 58 58 58 58 46 58 52 58 49 54 54 58 58 58 58 54 58 58 54 58 58 58 50 54 58 42 52 58 58 58 47 47 54 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 49 46 42 48 58 58 51 58 50 58 49 48 58 58 53 53 58 58 58 58 50 58 49 38 51 40 50 54 53 58 47 58 58 58 47 46 54 50 51 58 58 39 48 51 49 51 51 52 41 58 41 49 49 42 58 58 51 58 47 36 39 51 39 52 41 53 53 58 58 58 58 32 34 58 49 58 51 51 47 58 58 58 53 32 52 42 49 52 42 53 58 49 32 39 51 58 32 54 50 52 53 42 58 58 54 32 54 39 50 32 53 39 51 46 39 44 53 49 49 54 39 35 40 53 39 53 53 28 49 51 32 52 32 39 35 52 32 53 40 51 53 53 53 39 30 30 36 33 30 46 26 47 47 39 52 32 47 39 39 45 45 28 37 38 46 34 29 29 31 32 37 26 54 37 37 37 39 26 53 35 33 42 31 27 40 40 40 40 34 40 34 52 42 31 52 52 52 51 47 32 46 52 53 47 32 22 35 39 32 53 46 28 45 31 41 25 31 36 39 48 32 31 33 29 45 45 42 42 31 31 45 31 31 35 31 42 31 35 33 29 31 43 51 36 42 30 30 36 38 42 19 38 30 38 48 38 27 31 31 38 34 35 31 29 41 18 30 41 18 31 32 29 43 29 46 47 48 42 33 25 43 43 30 32 31 21 31 22 19 31 46 25 28 24 19 24 27 31 32 31 31 32 32 33 26 25 26 36 36 21 47 31 21 29 32 23 29 31 35 16 27 17 15 33 32 29 20 21 31 20 44 13 26 10 29 38 32 31 31 21 30 32 31 31 36 32 15 44 15 33 26 21 27 24 29 21 14 31 21 17 18 20 10 21 21 16 18 16 19 23 25 23 13 34 17 29 11 10 34 23 32 32 19 15 10 6 18 34 22 37 30 6 24 9 11 18 20 13 16 17 29 48 33 7 12 6 13 24 28 20 28 28 16 40 15 11 11 18 28 16 15 20 16 19 18 18 21 28 28 23 23 19 8 5 7 24 27 13 33 17 5 6 3 4 3 21 5 10 7 5 6 6 27 5 3 5 11 12 13 13 8 19 3 5 13 28 17 22 4 6 10 11 24 19 6 7 16 26 25 17 3 9 30 14 7 4 7 18 9 17 8 29 4 8 11 5 6 10 6 16 20 9 4 29 18 5 5 18 22 15 11 16 17 7 11 8 15 9 14 7 16 6 21 5 20 9 4 3 14 17 4 5 17 30 15 6 13 10 17 17 30 28 28 5 2 3 6 7 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_55370046_55371175
seq2: B6Ng01-281O11.b_48_1186 (reverse)

seq1  CCAA-GCACCAAAAACATG--TAGACAAAAGCAGGCATGGTGTGTACACC  47
      |||| ||||||||| ||||   ||||||||||||||||||   |||| ||
seq2  CCAAGGCACCAAAACCATGGTAAGACAAAAGCAGGCATGGGTGGTACCCC  50

seq1  TGTAATGCTAGCACTCAAGATGAGGCA-GAAGGGTTGC-TGTGA-GGTCA  94
      |||||||||||||||| |||||||||| |||||||||| ||||| |||| 
seq2  TGTAATGCTAGCACTC-AGATGAGGCAGGAAGGGTTGCTTGTGAGGGTCC  99

seq1  AAAGCAAAAAGCCCTTCCCC--TTCATT-CATGAAGACCTGTAAGAGTTT  141
      ||||||||| ||||||||||  | |||| |||||||||||||||||| ||
seq2  AAAGCAAAAGGCCCTTCCCCCTTCCATTCCATGAAGACCTGTAAGAG-TT  148

seq1  TAGTTGATATGCTAAGGTTGGATCTTAGAGCTAAAGTGCTTGCCTTGCAT  191
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAGTTGATATGCTAAGGTTGGATCTTAGAGCTAAAGTGC-TGCCTTGCAT  197

seq1  GTATTGGCCCT-GGGATTGAATCCCAGCATGATAAAAAAAAAAAAGAAAA  240
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGCCCTGGGGATTGAATCCCAGCATGATAAAAAAAAAAAAGAAAA  247

seq1  AAGAAAAAAGAAAGAAA-GGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAA  289
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAGAAAGAAAGGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAA  297

seq1  GAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGA  347

seq1  AAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAAAGAAAAA  388
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAAAGAAAAA  397

seq1  CTAAAGTCATAGGTTTTTGCATTTTATTAGAAAATTCCAATAAAGAATAA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCATAGGTTTTTGCATTTTATTAGAAAATTCCAATAAAGAATAA  447

seq1  AATGTAGCTGGTATAATACTATGTACCTGCAATCCCAGCACTGAGGAGGC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGCTGGTATAATACTATGTACCTGCAATCCCAGCACTGAGGAGGC  497

seq1  TAAGGCAGGGGTCTATTGTATTCAATACTAGCCTGGGCTGCATATCAAGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGGGGTCTATTGTATTCAATACTAGCCTGGGCTGCATATCAAGT  547

seq1  TCTAGAATGGCTTAGGTTATACAGTGAAATCTATTTTATTCTGTCTTTTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAATGGCTTAGGTTATACAGTGAAATCTATTTTATTCTGTCTTTTG  597

seq1  TTTTGTTTTCCAAAACAGGGTTTTTCTGTGTCACTGGTCTGGCCTTTTTG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTCCAAAACAGGGTTTTTCTGTGTCACTGGTCTGGCCTTTTTG  647

seq1  GAACTCCCTTTGCAGACCAGGCTGGCCTCAAATTCACAGAGATCTGCTTG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCTTTGCAGACCAGGCTGGCCTCAAATTCACAGAGATCTGCTTG  697

seq1  CCTCTGCCTCTTGAGTACTGGAGTTAAAGGCATGTACTAGCATGCCCAGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCTTGAGTACTGGAGTTAAAGGCATGTACTAGCATGCCCAGC  747

seq1  TGAATCCTTGTCTTAAAATACAAAATAAATTAAACATTTTAAGCTCATCA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTTGTCTTAAAATACAAAATAAATTAAACATTTTAAGCTCATCA  797

seq1  TTTCTTTCAGTGCTAATATCTTTAGTACCCAAACCTACACATGTAAGTAT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCAGTGCTAATATCTTTAGTACCCAAACCTACACATGTAAGTAT  847

seq1  ACACATGGACATAGATGAGTCTATTACAGAAACATGCTAACATGTGGTAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGACATAGATGAGTCTATTACAGAAACATGCTAACATGTGGTAA  897

seq1  CACAGTCAAAACAGTAAGCACAAAACACTTATGAAACAAAACACAAACAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAAAACAGTAAGCACAAAACACTTATGAAACAAAACACAAACAT  947

seq1  GTTTTTAGACCAGAGCGTGAAATGGCTATGGAACAGGCATCACTGTCAAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGACCAGAGCGTGAAATGGCTATGGAACAGGCATCACTGTCAAG  997

seq1  GACAATAGGAAATTACATGTGGTTCCCTTATATTAAAGTAGATTTGTTCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAGGAAATTACATGTGGTTCCCTTATATTAAAGTAGATTTGTTCT  1047

seq1  TATATTCCTAAAGCTGATGATGGTAGGTGGTAAATTATGTAATTGGATCC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCTAAAGCTGATGATGGTAGGTGGTAAATTATGTAATTGGATCC  1097

seq1  ATTTAGAAACATTAATGACTTGAACCTTTAATTATGGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAACATTAATGACTTGAACCTTTAATTATGGAATTC  1139

seq1: chr3_55253580_55254702
seq2: B6Ng01-281O11.g_69_1184

seq1  GAATTCTCCGTGTGGCAAAATGCTTGACAGCTACCAAATGCCAGTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTGTGGCAAAATGCTTGACAGCTACCAAATGCCAGTGTGTA  50

seq1  AAGGCCCATGAGTTAGTTTGCTTTTCTGTTGCTGTGACAGAGACCATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCATGAGTTAGTTTGCTTTTCTGTTGCTGTGACAGAGACCATGCA  100

seq1  ACCTGAGGATCAAAGGTTTATTTGGAGTATTCATCCCCCAATACCACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGATCAAAGGTTTATTTGGAGTATTCATCCCCCAATACCACTTC  150

seq1  CATCACTGAGGGAAGCCAAGGGGATAACTCAAGTGGGGCAGGAACCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGAGGGAAGCCAAGGGGATAACTCAAGTGGGGCAGGAACCTGGA  200

seq1  GGCACGAACTGAAGCTGAGACCGTGGAGGAGTGCTGGTCATTGATTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGAACTGAAGCTGAGACCGTGGAGGAGTGCTGGTCATTGATTTGTT  250

seq1  CCTTGGGTTGTGCTCAGCTTGCTTTTTTATACCACCCAAAACCACCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTTGTGCTCAGCTTGCTTTTTTATACCACCCAAAACCACCTTGT  300

seq1  CCAGAGGTGGCACTAGCTATAGTGGGCTGGACTATACCACATCAATCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGTGGCACTAGCTATAGTGGGCTGGACTATACCACATCAATCATC  350

seq1  AGTCAAGGAGATGTGACACAGACATGCTCTCGGGCCAATTCAATGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGAGATGTGACACAGACATGCTCTCGGGCCAATTCAATGCAGGC  400

seq1  TTTTCTCAACTGAAGTTCCCTCTTCCCAAATGGTTCTAGCTTATGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAACTGAAGTTCCCTCTTCCCAAATGGTTCTAGCTTATGTCAAG  450

seq1  TTGAGAAAAAAAATTTAACTAGCACTCCCAAGAGCTACTTGAAGCGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAAAAAATTTAACTAGCACTCCCAAGAGCTACTTGAAGCGAAAG  500

seq1  AGGGTTAGCCACAGAACACTAGGTAGATCAACTTCCTTGTTACTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAGCCACAGAACACTAGGTAGATCAACTTCCTTGTTACTTAAAAA  550

seq1  TACAAATGATTAGAAAAATATTCTAGAACTTTAAAAAGAAGGCATAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGATTAGAAAAATATTCTAGAACTTTAAAAAGAAGGCATAATTT  600

seq1  GATCATGGGTTATCAGGGAATCTTAGTATACATATTTTTAATCTAATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGGTTATCAGGGAATCTTAGTATACATATTTTTAATCTAATTGA  650

seq1  TTATCATTTCAAAAAATGTTTTAAATATAAACTATGGATTCTTGGAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTTCAAAAAATGTTTTAAATATAAACTATGGATTCTTGGAAGCA  700

seq1  AGATGTTGTGCATTTACATGTCATAATTAATCCAGACCTTTCACGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTGTGCATTTACATGTCATAATTAATCCAGACCTTTCACGAAGAC  750

seq1  AAAAATAGGGCTTTTTAAAAAATTATTTACAGTACTTAGCACTGAATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGGGCTTTTTAAAAAATTATTTACAGTACTTAGCACTGAATGTA  800

seq1  ATGAACATGAGAACTGAGAGTTTACGTATAGAGGAGACTGTTTTTCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATGAGAACTGAGAGTTTACGTATAGAGGAGACTGTTTTTCATCT  850

seq1  TCACAGAAAGGCACTCTTATAGATGCAAAGCCAGCTTCCTTGCAGCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAAGGCACTCTTATAGATGCAAAGCCAGCTTCCTTGCAGCTTCC  900

seq1  TGATGGTATATTG-AAGGTCACCATGTCCTTGTAAGAAGGACC-ATTACA  948
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  TGATGGTATATTGAAAGGTCACCATGTCCTTGTAAGAAGGACCAATTACA  950

seq1  CCTGATTTCCAGTGTTACCCACCTCTAGCTCCCACATATCACACTGATGC  998
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTGATTTCCAGTGTTACCCA-CTCTAGCTCCCACATATCACACTGATGC  999

seq1  AATTATCCCAATAAGGGCCCAGGACAATACACAGGGGCCTGTCAAAGTGG  1048
       |||||||||||  |||||  | |||||||||||||| |||||||   ||
seq2  -ATTATCCCAAT-CGGGCCAGGAACAATACACAGGGG-CTGTCAAGTGGG  1046

seq1  GTGGGA-GCTTCCCTCACATGTCTTTCTTTGTAAAGTTGAACGTTCTAAC  1097
      |||||| |||||||||||||||||||| ||||||   |||||||||| ||
seq2  GTGGGAGGCTTCCCTCACATGTCTTTCCTTGTAA--GTGAACGTTCT-AC  1093

seq1  GTTTTATTTGGCAAAAAAAATTCATG  1123
      |||| |||||||||||||   |||||
seq2  GTTTAATTTGGCAAAAAA---TCATG  1116

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Alignment Information