BAC Information

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BAC

Clone NameB6Ng01-282A04
Chromosome3 (Build37)
Map Location 134,075,785 - 134,076,721
singlet/doubletsinglet
Overlap genenone
Upstream geneE130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1
Downstream geneLOC100039234, Tacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282A04.b
ACCGA081340
length937
definitionB6Ng01-282A04.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctactcttggggcaccctattttggggtacagagattagtgttt
gaatgcatagcaaaacctgccaaccccaacatgtctgcaaagcttaaagc
ctatgtttgcttcctaatttaaggaattacatttttcaagtcttctgttc
acttgttctatgtgtggctgcgcccttcaaatggattaaacgtttcttcg
tctcagaaagcgtgaggtttctagtattttctttttatgataaataccgt
ctctataattttaccggctgaaagtgttcttccaagcctccttcccctat
tttatataaaatgacccccaaaacaacacaacatggtgaacttttaaatg
tcctctgtgcatcgcacgctcgacattgacttcgcaggtcagaaaatgaa
aacaaaagtggtgtaaaaataaaatccctgtttgttattatcagcacatt
aatagaatggtgattttgtttttaaggtcactgataattttacagattat
taaatatataaataccatttcctcgataggattactggtaattctatcaa
caattgtacaatatctccatctgccagattctccctgttactttttcaac
tcatggacatcaacatccttgacttcatggtttactgaccaacctttctc
atgcatacacatacatgttcccagatcctaactgctctgtccccttttgc
atttagccatgtacccctctacctttatactcctatcttaggaaaactct
cttctaacttaaattgcactctctcaatgataactctagattaatctata
tggtcaaaatcactctgttattttatgatatgcattaataaaagtagtta
cttcatgcacacagttgcttaccatatacatacccgctgggcaaaggtag
tgcacgcctttaatcctagcacttgggaggcagaggc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134075785_134076721
seq2: B6Ng01-282A04.b_40_976 (reverse)

seq1  GCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCACCACCACTGCCCA  50
      |||||||||||||||||||||||||||||||||||||| |||  ||||||
seq2  GCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCACTACCTTTGCCCA  50

seq1  GC-GGAAAGTATATTTTAAGCAACTGTGTGCATGAAGTAACTATTTTTAT  99
      || || | ||||||  ||||||||||||||||||||||||||| ||||||
seq2  GCGGGTATGTATATGGTAAGCAACTGTGTGCATGAAGTAACTACTTTTAT  100

seq1  TAATGCATATCATAAAATAACAGGGTGATTTTGACCATAAAGATTAATCT  149
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TAATGCATATCATAAAATAACAGAGTGATTTTGACCATATAGATTAATCT  150

seq1  AGAGTTACCATTGAGAGACTGCAATTTAAGTTAGAAGAGAGTTTTCCTAA  199
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  AGAGTTATCATTGAGAGAGTGCAATTTAAGTTAGAAGAGAGTTTTCCTAA  200

seq1  GATAGGAGTATAAAGGTAGA-GGGTACATGGCTAAATGCAAAAGGGGACA  248
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATAGGAGTATAAAGGTAGAGGGGTACATGGCTAAATGCAAAAGGGGACA  250

seq1  GAGCAGTTAGGATCTGGGAACATGTATGTGTATGCATGAGAAAGGTTGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTAGGATCTGGGAACATGTATGTGTATGCATGAGAAAGGTTGGT  300

seq1  CAGAAAACCATGAAGTCAAGGATGTTGATGTCCATGAGTTGAAAAAGTAA  348
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAACCATGAAGTCAAGGATGTTGATGTCCATGAGTTGAAAAAGTAA  350

seq1  CAGGGAGAATCTGGCAGATGGAGATATTGTACAATTGTTGATAGAATTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAATCTGGCAGATGGAGATATTGTACAATTGTTGATAGAATTAC  400

seq1  CAGTAATCCTATAGAGGAAATGGTATTTATATATTTAATAATCTGTAAAA  448
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGTAATCCTATCGAGGAAATGGTATTTATATATTTAATAATCTGTAAAA  450

seq1  TTAACAGTGACCTTAAAAACAAAATCACCATTCTATTAATGTGCTGATAA  498
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGTGACCTTAAAAACAAAATCACCATTCTATTAATGTGCTGATAA  500

seq1  TAACAAACACTGATTTTATTTTTACACCACTTTTGTTTTCATTTTCTGAC  548
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  TAACAAACAGGGATTTTATTTTTACACCACTTTTGTTTTCATTTTCTGAC  550

seq1  CTGCGAAGTCAATGTCGAGCGTGCGATGCACAGAGGACATTTAAAAGTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGAAGTCAATGTCGAGCGTGCGATGCACAGAGGACATTTAAAAGTTC  600

seq1  ACCATGCTGTGTTGTTTTGGGGGTCATTTTATATAAAATACTGGAAGGAG  648
      |||||| |||||||||||||||||||||||||||||||||  ||||||||
seq2  ACCATGTTGTGTTGTTTTGGGGGTCATTTTATATAAAATAGGGGAAGGAG  650

seq1  GCTTGGAAGAACACTTTCAGCCTGTAAAATTATAGAGACGGTATTTATCA  698
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTTGGAAGAACACTTTCAGCCGGTAAAATTATAGAGACGGTATTTATCA  700

seq1  TAAAAAGAAAATACTAGAAACCTCATGCTTTCTGAGACGAAGAAACGTTT  748
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAAAAGAAAATACTAGAAACCTCACGCTTTCTGAGACGAAGAAACGTTT  750

seq1  AATCCATTCGAAGGGTGCAGTTACACATAGTACAAGTGAACAGAAGACTT  798
      |||||||| |||||| ||||  |||||||| |||||||||||||||||||
seq2  AATCCATTTGAAGGGCGCAGCCACACATAGAACAAGTGAACAGAAGACTT  800

seq1  GAAAAATGTAATTCCTTAAATTAGGATGCAAACATAGGCTTTAAGCTTTG  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAAAATGTAATTCCTTAAATTAGGAAGCAAACATAGGCTTTAAGCTTTG  850

seq1  CAGATATGTTGGGGTTGGCTGGTTCTGCTATGCATTCAAATACTAAACTC  898
      |||| |||||||||||||| |||| ||||||||||||||| ||||| |||
seq2  CAGACATGTTGGGGTTGGCAGGTTTTGCTATGCATTCAAACACTAATCTC  900

seq1  TGTACCCCAAAATCTGGTTGCCCCAAGAGTAGTGAATTC  937
      |||||||||||||  || |||||||||||||| ||||||
seq2  TGTACCCCAAAAT-AGGGTGCCCCAAGAGTAG-GAATTC  937