BAC Information

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BAC

Clone NameB6Ng01-282B05
Chromosome3 (Build37)
Map Location 32,352,909 - 32,354,089
singlet/doubletsinglet
Overlap genePik3ca
Upstream geneLOC625125, Kcnmb2, LOC665514, Zmat3, 4930429B21Rik
Downstream geneKcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13, Pex2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282B05.bB6Ng01-282B05.g
ACCGA081388GA081389
length1,1821,014
definitionB6Ng01-282B05.b B6Ng01-282B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagcacacacacacacacagacacacacacacacagacacag
acacacacacacacacacagagacacacacacacacagacacacacatac
acacatacacacacacatacacacagacacacacagacacacacagacac
acacacacacacacacacacacacacacacacacacacacacacacactt
tttttttctcctgctagtctggcttctgtcaatttaattcacagtctgac
ccaggaatgaataagggcagagacttgctatttttgctttcctaacttat
gaacactcccagggggatggaaaggagtactcgactcagaattctaggag
tcagccttcagttatctcacccggttgctaagactcagaacaagtgactt
ccttatagcaggagggtctgccttcagggcagataggggagctgaggagt
gtctgcatatgcctactctctgcagacctttagtatctccagatattaaa
gcataataccccagttccccagacgtctccacagacacactgtaaagcat
tctagatgtcgtgcgtgctgcactccctaacggttaaacggttgccatgg
ttcacaaacatcttgtgtacaaagacagcagcgtgcacccagcatgagct
cactgtgctctcctcaccgtcgccatttttaaagatgatctcattgttct
gaaacagtagctctgacatgatgtctgggttctcccaattcaaccacagt
ggcctttttgcagaggacataattcgacactcttcaagcctgtaaaagag
tttaagactttaccaggcactttaactttttacactcttggtctttgggc
ttacttaaaattcatacacaatataaccttttcaagtttataagacttaa
aaaattttaaaaaccaataaacattaatcttaaaaatgtttatataaatt
tccagcccaatctaagaatacataattcgttttatatagaccatttccac
ttcttgtcctgatatcagattataccatagaaagatttaactattattca
aagtagcagaactaaataaatgtagcttgtagtttgaaggcttattttta
cttattgcttgtcttataagaactggagggctggaattttgtttaagaac
ctatatggaaatactttacttgaaactatcaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatatgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctttatctttgttgaat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagtta
ggtagagtaccttctatttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacctgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgactcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgtttgagtataaccttttgtagaaggatctgatggtgttttggat
ttctttcaggatctgttgtttatgtctccctttttcatttctgattttgt
taaattaggattttgtccctgtgcccttttagtaagtctagctaagggtt
ttatcttatcttgttgattttctcaaagaaccaactccctcattttggtt
aaattctttgaaatagttcctttcttgttttccacttgggttgatttcac
cccctgatttttgatatttccttgccttcacttccttcttgggtggaatt
tgcttcctttttttcctagagctttttagaatgtgttggccagctgtcag
tatgtgtctcttctcccgttcctcctggaggacctcgaagctcatgagtt
tctcctcttaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32352909_32354089
seq2: B6Ng01-282B05.b_45_1226 (reverse)

seq1  TTGATATGTTTC-AGT-AAGTATTTTTCCATATAAG-TCTT-AACAAAAA  46
      |||||| ||||| ||| |||||  |||||||||| | |||| ||||||| 
seq2  TTGATA-GTTTCAAGTAAAGTA--TTTCCATATAGGTTCTTAAACAAAAT  47

seq1  TCCAACCCTCCAATTCTTATAAGAC-AGCAAT-AGTAAAA--TAGCCTT-  91
      |||| ||||||| |||||||||||| |||||| |||||||   |||||| 
seq2  TCCAGCCCTCCAGTTCTTATAAGACAAGCAATAAGTAAAAATAAGCCTTC  97

seq1  AAACTAC-AGCTACATTTATTTAGTTTCTGCTACTTTG-ATAATAGTTTA  139
      ||||||| |||||||||||||||| ||||||||||||| ||||||| |||
seq2  AAACTACAAGCTACATTTATTTAG-TTCTGCTACTTTGAATAATAG-TTA  145

seq1  AATCTTTCTATGGTTATAAATTCTGATATCAGGGACAAGAAGTTGGAAAT  189
      ||||||||||||| |||||  |||||||||| |||||||||| |||||||
seq2  AATCTTTCTATGG-TATAA--TCTGATATCA-GGACAAGAAG-TGGAAAT  190

seq1  GGTCTATATAAAACGAATTATGTATTCTTAGATT-GGCTGGAAATTTATA  238
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGTCTATATAAAACGAATTATGTATTCTTAGATTGGGCTGGAAATTTATA  240

seq1  TAAACATTTTTAAGATTAATGTTTATTGGTTTTTAAAATTTTTTAAGTCT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTTTTAAGATTAATGTTTATTGGTTTTTAAAATTTTTTAAGTCT  290

seq1  TATAAAACTTGAAAAGGTTATATTGTGTATGAATTTTAAGTAAGCCCAAA  338
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAT-AAACTTGAAAAGGTTATATTGTGTATGAATTTTAAGTAAGCCCAAA  339

seq1  GACCAAGAGTGTAAAAAGTTAAAGTGCCTGGTAAAGTCTTAAACTCTTTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAGTGTAAAAAGTTAAAGTGCCTGGTAAAGTCTTAAACTCTTTT  389

seq1  ACAGGCTTGAAGAGTGTCGAATTATGTCCTCTGCAAAAAGGCCACTGTGG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTTGAAGAGTGTCGAATTATGTCCTCTGCAAAAAGGCCACTGTGG  439

seq1  TTGAATTGGGAGAACCCAGACATCATGTCAGAGCTACTGTTTCAGAACAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTGGGAGAACCCAGACATCATGTCAGAGCTACTGTTTCAGAACAA  489

seq1  TGAGATCATCTTTAAAAATGGCGACGGTGAGGAGAGCACAGTGAGCTCAT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCATCTTTAAAAATGGCGACGGTGAGGAGAGCACAGTGAGCTCAT  539

seq1  GCTGGGTGCACGCTGCTGTCTTTGTACACAAGATGTTTGTGAACCATGGC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGCACGCTGCTGTCTTTGTACACAAGATGTTTGTGAACCATGGC  589

seq1  AACCGTTTAACCGTTAGGGAGTGCAGCACGCACGACATCTAGAATGCTTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTTTAACCGTTAGGGAGTGCAGCACGCACGACATCTAGAATGCTTT  639

seq1  ACAGTGTGTCTGTGGAGACGTCTGGGGAACTGGGGTATTATGCTTTAATA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGTCTGTGGAGACGTCTGGGGAACTGGGGTATTATGCTTTAATA  689

seq1  TCTGGAGATACTAAAGGTCTGCAGAGAGTAGGCATATGCAGACACTCCTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGATACTAAAGGTCTGCAGAGAGTAGGCATATGCAGACACTCCTC  739

seq1  AGCTCCCCTATCTGCCCTGAAGGCAGACCCTCCTGCTATAAGGAAGTCAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCTATCTGCCCTGAAGGCAGACCCTCCTGCTATAAGGAAGTCAC  789

seq1  TTGTTCTGAGTCTTAGCAACCGGGTGAGATAACTGAAGGCTGACTCCTAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGAGTCTTAGCAACCGGGTGAGATAACTGAAGGCTGACTCCTAG  839

seq1  AATTCTGAGTCGAGTACTCCTTTCCATCCCCCTGGGAGTGTTCATAAGTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAGTCGAGTACTCCTTTCCATCCCCCTGGGAGTGTTCATAAGTT  889

seq1  AGGAAAGCAAAAATAGCAAGTCTCTGCCCTTATTCATTCCTGGGTCAGAC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCAAAAATAGCAAGTCTCTGCCCTTATTCATTCCTGGGTCAGAC  939

seq1  TGTGAATTAAATTGACAGAAGCCAGACTAGCAGGAGAAAAAAAAAGTGTG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTAAATTGACAGAAGCCAGACTAGCAGGAGAAAAAAAAAGTGTG  989

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTG  1039

seq1  TGTGTGTCTGTGTGTGTCTGTGTGTATGTGTGTGTGTATGTGTGTATGTG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTGTGTGTGTCTGTGTGTATGTGTGTGTGTATGTGTGTATGTG  1089

seq1  TGTGTCTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTCTGTGTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTCTGTGTC  1139

seq1  TGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGCTTAAGAATTC  1181
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGCTTAAGAATTC  1182