BAC Information

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BAC

Clone NameB6Ng01-283J04
Chromosome3 (Build37)
Map Location 67,975,830 - 67,976,914
singlet/doubletsinglet
Overlap genenone
Upstream geneRsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283J04.bB6Ng01-283J04.g
ACCGA082501GA082502
length1,0801,161
definitionB6Ng01-283J04.b B6Ng01-283J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagacagacagacagacagacagacagacattgtaaggatat
tgattagagagataataaatagtctcatagatcctctaggaaatgcacaa
caaaattatttatgaaatatcattttctgccaaaagaatcttagtttgga
caatagcccttagattaacagagtcagtcttaccttggaaggcatgttgg
ctagataggacattaaaattggaatgaagtgatgaacctggatggtggtt
tgagaccatgggtctttggactcaaaatcttgctttatctcttgggaaat
atttcttgctgtttgtaaagcccaggtcctcaactgtaaccatagacaca
gaacagtgacaatctgcttggtttgcaaagcagttcgcataatctctggt
gtgtaacaaatatattccctttaataatagtaatgtatcaaaaaaacttg
taaaagtggtaggtgaccttaattctttctttgagtttgttctgttttaa
ttctgggctttgttcaattactataatttattatctttataatcaagcca
ttgttcctatcagtcttggtccctgttcctcatgaacagtgcctggttca
tggtcttgagcgttacaaagtgactttagagccttgtgagcatagacctc
aattctagttgtggttacattattacatggcagtgattcttattgccctg
ccaatggtctaagaaccagatccaaagtgcaactgttgagttatacttct
gtgaatgaatgacatgaaaactcatgggtttaagtttaaatacacattga
gagtttctttaggcttttatttatttggggtactattaatcttccagcac
atattgatgcaccaatatttttgaacttttgaactgctactcttttattc
atgccccgcatttcaagtgagaatcatttctaatctcaatgatgtcatag
ataaacatttaattcttcccaacttttgtttctgctagacattctcagtt
attttattttctaagtctacttgcacactaacaaagaaaataccctagtg
gctgtggattttgcctgaaaatcagcttta
gaattctttgtttagatctgtaccccattttttaatagggttctttgttt
ctctggagtctaacttcttgagttctttgtatatattagatattagcccc
ataaagggatttaggattggtgaagatcctttcccaatctattggtggcc
ttttttctttttcacagtgagctttgccatatagaagctttgcaatttta
caaggccccatttgtcgattcttaatcttacagcacaagccattgctctt
ctgttcaggaatttttcccctgtgcccatatcttcaacgtttttccccac
tttcttctctataagtttcagtgtatctggatttatgtggaggtccttga
tccacttggacttgagctttgtacaaggagataagaatggatcgatttgc
attcttctacatgctaaccaccagttgagctagcaccatttgttgaaaat
gctgtcctttttccactggatggctttagctcctttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtctttaattctattccactga
tctaccagtctgtcattgtaccaataccatgcagtttttatcacaattgc
tctatagtacagcttgaggtctgggatggtgattccaccagaagttcttt
tattgtcactatgctagggttttttgcttttccagatggatttgcaaatt
gttctttctaactttgtgaagaattgagttggaattttgatgggaattgc
attgaatctatagattgctttcagtaagatagccattttcactatattaa
ttctgccaatccatgagcgtgggagatctttccatcttctgatatcttct
tccatttctttcttcagagacttgaagttcttatcatacagaactttcac
ttccttagttagagtcacaccaaggtatttatatatttgggactattgtg
aaggctgttgtttcctaatttatttctcagcctgtttatccttgtgtaga
gaagtcactgattgtttgagttaattttttattcagctacttgctgaagt
gttaatcagtttaggtgctccttctggaggttttgaggtcactatatagt
atttatcaattcatggccaacggatatttggacttctcttcccaatcgtt
atctcctattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67975830_67976914
seq2: B6Ng01-283J04.b_45_1124 (reverse)

seq1  TAAAGCTGATTTTTCAAGGGCAAAAATCCCACAGCCACTAGGGTATTTCT  50
      ||||||||| ||||||  |||||||   ||||||||||||||||||||  
seq2  TAAAGCTGA-TTTTCA--GGCAAAA--TCCACAGCCACTAGGGTATTTTC  45

seq1  TTTGTTAGTGTGCAAGTAGGACTTAGAAA--TAAATAACTGAGAATGTCT  98
      |||||||||||||||||| ||||||||||   ||||||||||||||||| 
seq2  TTTGTTAGTGTGCAAGTA-GACTTAGAAAATAAAATAACTGAGAATGTC-  93

seq1  TAGCAGAAACAAAAGTTGGGAAGAATTAAATGTTTATCTATGACATCATT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAAACAAAAGTTGGGAAGAATTAAATGTTTATCTATGACATCATT  143

seq1  GAGATTAGAAATGATTCTCACTTGAAATGCGGGGCATGAATAAAAGAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAGAAATGATTCTCACTTGAAATGCGGGGCATGAATAAAAGAGTA  193

seq1  GCAGTTCAAAAGTTCAAAAATATTGGTGCATCAATATGTGCTGGAAGATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCAAAAGTTCAAAAATATTGGTGCATCAATATGTGCTGGAAGATT  243

seq1  AATAGTACCCCAAATAAATAAAAGCCTAAAGAAACTCTCAATGTGTATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACCCCAAATAAATAAAAGCCTAAAGAAACTCTCAATGTGTATTT  293

seq1  AAACTTAAACCCATGAGTTTTCATGTCATTCATTCACAGAAGTATAACTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAAACCCATGAGTTTTCATGTCATTCATTCACAGAAGTATAACTC  343

seq1  AACAGTTGCACTTTGGATCTGGTTCTTAGACCATTGGCAGGGCAATAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTGCACTTTGGATCTGGTTCTTAGACCATTGGCAGGGCAATAAGA  393

seq1  ATCACTGCCATGTAATAATGTAACCACAACTAGAATTGAGGTCTATGCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGCCATGTAATAATGTAACCACAACTAGAATTGAGGTCTATGCTC  443

seq1  ACAAGGCTCTAAAGTCACTTTGTAACGCTCAAGACCATGAACCAGGCACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCTCTAAAGTCACTTTGTAACGCTCAAGACCATGAACCAGGCACT  493

seq1  GTTCATGAGGAACAGGGACCAAGACTGATAGGAACAATGGCTTGATTATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGAGGAACAGGGACCAAGACTGATAGGAACAATGGCTTGATTATA  543

seq1  AAGATAATAAATTATAGTAATTGAACAAAGCCCAGAATTAAAACAGAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATAAATTATAGTAATTGAACAAAGCCCAGAATTAAAACAGAACA  593

seq1  AACTCAAAGAAAGAATTAAGGTCACCTACCACTTTTACAAGTTTTTTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAGAAAGAATTAAGGTCACCTACCACTTTTACAAGTTTTTTTGA  643

seq1  TACATTACTATTATTAAAGGGAATATATTTGTTACACACCAGAGATTATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACTATTATTAAAGGGAATATATTTGTTACACACCAGAGATTATG  693

seq1  CGAACTGCTTTGCAAACCAAGCAGATTGTCACTGTTCTGTGTCTATGGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTGCTTTGCAAACCAAGCAGATTGTCACTGTTCTGTGTCTATGGTT  743

seq1  ACAGTTGAGGACCTGGGCTTTACAAACAGCAAGAAATATTTCCCAAGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGAGGACCTGGGCTTTACAAACAGCAAGAAATATTTCCCAAGAGA  793

seq1  TAAAGCAAGATTTTGAGTCCAAAGACCCATGGTCTCAAACCACCATCCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGATTTTGAGTCCAAAGACCCATGGTCTCAAACCACCATCCAG  843

seq1  GTTCATCACTTCATTCCAATTTTAATGTCCTATCTAGCCAACATGCCTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCACTTCATTCCAATTTTAATGTCCTATCTAGCCAACATGCCTTC  893

seq1  CAAGGTAAGACTGACTCTGTTAATCTAAGGGCTATTGTCCAAACTAAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAAGACTGACTCTGTTAATCTAAGGGCTATTGTCCAAACTAAGAT  943

seq1  TCTTTTGGCAGAAAATGATATTTCATAAATAATTTTGTTGTGCATTTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGCAGAAAATGATATTTCATAAATAATTTTGTTGTGCATTTCCT  993

seq1  AGAGGATCTATGAGACTATTTATTATCTCTCTAATCAATATCCTTACAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATCTATGAGACTATTTATTATCTCTCTAATCAATATCCTTACAAT  1043

seq1  GTCTGTCTGTCTGTCTGTCTGTCTGTCTGAAGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGTCTGTCTGTCTGTCTGTCTGAAGAATTC  1080