BAC Information

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BAC

Clone NameB6Ng01-283J13
Chromosome3 (Build37)
Map Location 63,623,567 - 63,786,879
singlet/doubletdoublet
Overlap genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps
Upstream geneLOC676984, LOC666967, Mme
Downstream geneLOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283J13.bB6Ng01-283J13.g
ACCGA082519GA082520
length394946
definitionB6Ng01-283J13.b B6Ng01-283J13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,786,480 - 63,786,879)(63,623,567 - 63,624,513)
sequence
tcactgtttaaaagtgtacagtcgtggcacataaaggagcacacctttaa
tcccaccaattagggaggcagtggcaggactatctctgagttcaagtcta
gcctaacttacatgttctaggctagccagtggtacatgtgagtccctgtc
tcaaataagtaaatggatggatgaatggatggatggatggatggatggat
gaatagatgcatggatggatggaccaacggaaagacaaacacaccaataa
atagtaatttgcttagtgatctagttacttatgaacaggtttccttacaa
ggtcagttccttgacaaaatagtactatacagtaatatgttgaccaaatt
atcttacatacaaatagtattttaatgaatataagaaaacatga
gaattcctactagagccagaacaaaccatatgtgcatacaaggagagaac
agtggctagccacagcattctttttgtgccataactctgctctaaaaaat
taaattaaaaaacacatatacttaagatcatcacacacttatagaacaag
aactggtcacaatactgacatgccaatcagccaaacacagttagctgcta
agtttggcatccttggcagaggaatactccaagtaaaaacagataacaga
aatttaaaaaaaggctatcagaatattcacccaggagtgtcaactttctg
taattcatattgtgggtatttggagcaactcaaccaattttttacttact
ccccttattttggatcgctcgattttctttttctgaaaatacggctcaag
cctgattggtgtaaagcccttagattgaatctgaaaagtttctctacata
aactgtcttccatgctaactttgttccttttatcccactcccacacccca
ctttttaaaaagtattcaagctttttaagtaaacaggagatcagaactgg
atgcagagaacagacctacgacccttattctctggttctaggaaataaag
cttcaggtgacaaaaacaaactgctctgataaggtatcccaggcaacaga
caccaaacagaacacacatatacatcctccacccaaactgtcgggcagtg
tgaggcattcatgtagagaccttttcctatacaataaccctctccaccgt
gtttagatctctatgagcataaaagggaaagagatgcccctgctacagta
gctcccataccatgaaatcctagaaatcacctcctaagaagaagtggcca
tgcttattttgttttgcagtatgttttcttttttccctcctttagaaaaa
gtttattttatgtgtatgggtgtatgtctgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63786480_63786879
seq2: B6Ng01-283J13.b_44_443 (reverse)

seq1  TAATGTTTTCTTCTTGTGATTTAAATACTATTTGTCTCTAAGATAATTTG  50
      | |||||||||| |  | ||| ||||||||||||| | ||||||||||||
seq2  TCATGTTTTCTTATATTCATTAAAATACTATTTGTATGTAAGATAATTTG  50

seq1  GGCAACATACTACTGTATATTACTATTTTGTCATGGAACTGACCTTGTAA  100
      | ||||||| ||||||||| ||||||||||||| ||||||||||||||||
seq2  GTCAACATATTACTGTATAGTACTATTTTGTCAAGGAACTGACCTTGTAA  100

seq1  GGAAACCTGTTCATAAGTAACTAGATCACTTAGCAAATTACTATTTATTT  150
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  GGAAACCTGTTCATAAGTAACTAGATCACTAAGCAAATTACTATTTATTG  150

seq1  GTTTGTTTGTCTTTCCGTTGGTCCATCCATCCATGCATCTATTCATCCAT  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTGTCTTTCCGTTGGTCCATCCATCCATGCATCTATTCATCCAT  200

seq1  CCATCCATCCATCCATCCATTCATCCATCCATTTACTTATTTGAGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCCATCCATTCATCCATCCATTTACTTATTTGAGACAGG  250

seq1  GACTCACATGTACCACTGGCTAGCCTAGAACATGTAAGTTAGGCTAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACATGTACCACTGGCTAGCCTAGAACATGTAAGTTAGGCTAGACT  300

seq1  TGAACTCAGAGATAGTCCTGCCACTGCCTCCCTAATTGGTGGGATTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGAGATAGTCCTGCCACTGCCTCCCTAATTGGTGGGATTAAAG  350

seq1  GTGTGCTCCTTTATGTGCCACGACTGTACACTTTTAAACAGTGAGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTCCTTTATGTGCCACGACTGTACACTTTTAAACAGTGAGAATTC  400

seq1: chr3_63623567_63624513
seq2: B6Ng01-283J13.g_63_1008

seq1  GAATTCCTACTAGAGCCAGAACAAACCATATGTGCATACAAGGAGAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTAGAGCCAGAACAAACCATATGTGCATACAAGGAGAGAAC  50

seq1  AGTGGCTAGCCACAGCATTCTTTTTGTGCCATAACTCTGCTCTAAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAGCCACAGCATTCTTTTTGTGCCATAACTCTGCTCTAAAAAAT  100

seq1  TAAATTAAAAAACACATATACTTAAGATCATCACACACTTATAGAACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAAAAACACATATACTTAAGATCATCACACACTTATAGAACAAG  150

seq1  AACTGGTCACAATACTGACATGCCAATCAGCCAAACACAGTTAGCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTCACAATACTGACATGCCAATCAGCCAAACACAGTTAGCTGCTA  200

seq1  AGTTTGGCATCCTTGGCAGAGGAATACTCCAAGTAAAAACAGATAACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGCATCCTTGGCAGAGGAATACTCCAAGTAAAAACAGATAACAGA  250

seq1  AATTTAAAAAAAGGCTATCAGAATATTCACCCAGGAGTGTCAACTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAAAAGGCTATCAGAATATTCACCCAGGAGTGTCAACTTTCTG  300

seq1  TAATTCATATTGTGGGTATTTGGAGCAACTCAACCAATTTTTTACTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATATTGTGGGTATTTGGAGCAACTCAACCAATTTTTTACTTACT  350

seq1  CCCCTTATTTTGGATCGCTCGATTTTCTTTTTCTGAAAATACGGCTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTATTTTGGATCGCTCGATTTTCTTTTTCTGAAAATACGGCTCAAG  400

seq1  CCTGATTGGTGTAAAGCCCTTAGATTGAATCTGAAAAGTTTCTCTACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGGTGTAAAGCCCTTAGATTGAATCTGAAAAGTTTCTCTACATA  450

seq1  AACTGTCTTCCATGCTAACTTTGTTCCTTTTATCCCACTCCCACACCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTTCCATGCTAACTTTGTTCCTTTTATCCCACTCCCACACCCCA  500

seq1  CTTTTTAAAAAGTATTCAAGCTTTTTAAGTAAACAGGAGATCAGAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAAAGTATTCAAGCTTTTTAAGTAAACAGGAGATCAGAACTGG  550

seq1  ATGCAGAGAACAGACCTACGACCCTTATTCTCTGGTTCTAGGAAATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGAACAGACCTACGACCCTTATTCTCTGGTTCTAGGAAATAAAG  600

seq1  CTTCAGGTGACAAAAACAAACTGCTCTGATAAGGTATCCCAGGCAACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGTGACAAAAACAAACTGCTCTGATAAGGTATCCCAGGCAACAGA  650

seq1  CACCAAACAGAACACACATATACATCCTCCACCCAAACTGTCGGGCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACAGAACACACATATACATCCTCCACCCAAACTGTCGGGCAGTG  700

seq1  TGAGGCATTCATGTAGAGACCTTTTCCTATACAATAACCCTCTCCACCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATTCATGTAGAGACCTTTTCCTATACAATAACCCTCTCCACCGT  750

seq1  GTTTAGATCTCTATGAGCATAAAAGGGAAAGAGATGCCCCTGCTACAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATCTCTATGAGCATAAAAGGGAAAGAGATGCCCCTGCTACAGTA  800

seq1  GCTCCCATACCATGAAATCCTAGAAATCACCTCCTAAGAAGAAGTGGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCATACCATGAAATCCTAGAAATCACCTCCTAAGAAGAAGTGGCCA  850

seq1  TGCTTATTTTGTTTTGCAGTATGTTTTCTTTTTTCCCTCCTTTAGAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTTTGTTTTGCAGTATGTTTTCTTTTTTCCCTCCTTTAGAAAAA  900

seq1  GTTTATTTTATGTGTATGGGTGTATGTCTTGTGTGTGTGTGTGTGTG  947
      |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTTATTTTATGTGTATGGGTGTATGTC-TGTGTGTGTGTGTGTGTG  946