BAC Information

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BAC

Clone NameB6Ng01-284A04
Chromosome3 (Build37)
Map Location 142,734,501 - 142,735,635
singlet/doubletsinglet
Overlap genenone
Upstream geneGabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883
Downstream gene1700001N15Rik, EG668889, EG621809, LOC100039938
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A04.bB6Ng01-284A04.g
ACCGA082822GA082823
length1,2141,138
definitionB6Ng01-284A04.b B6Ng01-284A04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtagagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaactgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagtgatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtaagactaggccggggcctagcaaac
acagaagtggatgctcacagtaagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggaacaacattatgactaacagtaccccggagctcttgactctag
ctgcatattgtatcaaaggatggctagtcggccatccactgggaagagag
gccattgggacaccgcaactttatatgctcaagtacaggggatcgccaag
gccaaacggaaattggagtggttacgggagtgtcgctcagtcaggtacgg
ggagcgagcacgac
gaattcaggcttggtgctgatccctttatataatgagccatattgctgct
ctcacatccctttaattgagtcttaagtatttgtcccacatttaggcaag
gtcttccctccgaggttaaatctcagtggaagaaaactccctcacagaca
catccacaggtgtgtcttccaaatcattttaaatccagtcaagttgacaa
tgaagatacacaagcccatactttggccatgaagctatggataatctggt
ttcatcttcattgttgaggttgtcttcagtggctaattggaatttagtct
ataggatgttttgagtttctggtggctacctgttcttcacttgcataggc
tgtttctcttgtcttgtccctttcttcttatacacaatgttttcattgct
gtttgaaagtttatagcacagagatggataaggatgtggggatatggact
agataaaaccttggctcaaatccacacaaaacttcctaaaacttgtttat
accaagtgtttggatagattttggcactgatctgtctctttagatgacag
ctaggtctggcttggatctttgcattcatcttttgattacgagtaacatc
ttgttgtttacattttaggagctactttctgacttcaaaccttccgagtg
aaaaatgcggaggagcagggaggtcatggcttcattccagagttcctccg
tggtgaagaaatctcagttttaaaaatgtcttcacttatgagccattggt
ctcagttgttggcagtaggattgcttgtgattgaaggctcaaagtgcaaa
aaccagaaagtaatgggcacaaatatagcctggcttgatacatacttctg
caaatcccaatgaaaaaggagtatttctactgcttacctacttgtatttc
aagttcttgaaatgactagagtcattgctcagatacgctgtcagtaaggc
tctttcaccctccttggtcttccctcattctctttcccaacactcatctc
agtgccccgtgagtatgtaggagaatgggatgggtcaaaagtactagttt
ctagtactcatggagtactttagcaggatccattgtatttttggatgtag
gtataatgcagtggctatggtacagatacattgtgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_142734501_142735635
seq2: B6Ng01-284A04.g_64_1201

seq1  GAATTCAGGCTTGGTGCTGATCCCTTTATATAATGAGCCATATTGCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTTGGTGCTGATCCCTTTATATAATGAGCCATATTGCTGCT  50

seq1  CTCACATCCCTTTAATTGAGTCTTAAGTATTTGTCCCACATTTAGGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATCCCTTTAATTGAGTCTTAAGTATTTGTCCCACATTTAGGCAAG  100

seq1  GTCTTCCCTCCGAGGTTAAATCTCAGTGGAAGAAAACTCCCTCACAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCCTCCGAGGTTAAATCTCAGTGGAAGAAAACTCCCTCACAGACA  150

seq1  CATCCACAGGTGTGTCTTCCAAATCATTTTAAATCCAGTCAAGTTGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGGTGTGTCTTCCAAATCATTTTAAATCCAGTCAAGTTGACAA  200

seq1  TGAAGATACACAAGCCCATACTTTGGCCATGAAGCTATGGATAATCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATACACAAGCCCATACTTTGGCCATGAAGCTATGGATAATCTGGT  250

seq1  TTCATCTTCATTGTTGAGGTTGTCTTCAGTGGCTAATTGGAATTTAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTCATTGTTGAGGTTGTCTTCAGTGGCTAATTGGAATTTAGTCT  300

seq1  ATAGGATGTTTTGAGTTTCTGGTGGCTACCTGTTCTTCACTTGCATAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATGTTTTGAGTTTCTGGTGGCTACCTGTTCTTCACTTGCATAGGC  350

seq1  TGTTTCTCTTGTCTTGTCCCTTTCTTCTTATACACAATGTTTTCATTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTGTCTTGTCCCTTTCTTCTTATACACAATGTTTTCATTGCT  400

seq1  GTTTGAAAGTTTATAGCACAGAGATGGATAAGGATGTGGGGATATGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGTTTATAGCACAGAGATGGATAAGGATGTGGGGATATGGACT  450

seq1  AGATAAAACCTTGGCTCAAATCCACACAAAACTTCCTAAAACTTGTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAACCTTGGCTCAAATCCACACAAAACTTCCTAAAACTTGTTTAT  500

seq1  ACCAAGTGTTTGGATAGATTTTGGCACTGATCTGTCTCTTTAGATGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTGTTTGGATAGATTTTGGCACTGATCTGTCTCTTTAGATGACAG  550

seq1  CTAGGTCTGGCTTGGATCTTTGCATTCATCTTTTGATTACGAGTAACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCTGGCTTGGATCTTTGCATTCATCTTTTGATTACGAGTAACATC  600

seq1  TTGTTGTTTACATTTTAGGAGCTACTTTCTGACTTCAAACCTTCCGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTACATTTTAGGAGCTACTTTCTGACTTCAAACCTTCCGAGTG  650

seq1  AAAAATGCGGAGGAGCAGGGAGGTCATGGCTTCATTCCAGAGTTCCTCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCGGAGGAGCAGGGAGGTCATGGCTTCATTCCAGAGTTCCTCCG  700

seq1  TGGTGAAGAAATCTCAGTTTTAAAAATGTCTTCACTTATGAGCCATTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAGAAATCTCAGTTTTAAAAATGTCTTCACTTATGAGCCATTGGT  750

seq1  CTCAGTTGTTGGCAGTAGGATTGCTTGTGATTGAAGGCTCAAAGTGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTGTTGGCAGTAGGATTGCTTGTGATTGAAGGCTCAAAGTGCAAA  800

seq1  AACCAGAAAGTAATGGGCACAAATATAGCCTGGCTTGATACATACTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAAGTAATGGGCACAAATATAGCCTGGCTTGATACATACTTCTG  850

seq1  CAAATCCCAATGAAAAAGGAGTATTTCTACTGCTTACCTACTTGTATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCAATGAAAAAGGAGTATTTCTACTGCTTACCTACTTGTATTTC  900

seq1  AAGTTCTTGAAATGACTAGAGTCATTGCTCAGATAACGCTGTCAGTAAGG  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTTCTTGAAATGACTAGAGTCATTGCTCAGAT-ACGCTGTCAGTAAGG  949

seq1  CTCTTTCACCCTCCTTGGTCTTCCCTCCATTCTCTTTCCCAACACTCATC  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCTTTCACCCTCCTTGGTCTTCCCT-CATTCTCTTTCCCAACACTCATC  998

seq1  TCAGTGCCCCGTGAGTATGTAGGAGA--TGGATGGGTCAAAAGTACTTAG  1048
      ||||||||||||||||||||||||||   ||||||||||||||||| |||
seq2  TCAGTGCCCCGTGAGTATGTAGGAGAATGGGATGGGTCAAAAGTAC-TAG  1047

seq1  TTTCTAGTACTTCAT-GAGTAC-TTAGCA-GAT-CATTGTTATTTTTTGA  1094
      |||||||||| |||| |||||| |||||| ||| ||||| ||||||| ||
seq2  TTTCTAGTAC-TCATGGAGTACTTTAGCAGGATCCATTG-TATTTTTGGA  1095

seq1  TGTAAGTAT-ATGCATGTGG-TATGTGTACAG-TACA-TGTGCTG  1135
      |||| |||| ||||| |||| |||| |||||| |||| |||||||
seq2  TGTAGGTATAATGCA-GTGGCTATG-GTACAGATACATTGTGCTG  1138