BAC Information

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BAC

Clone NameB6Ng01-284D10
Chromosome3 (Build37)
Map Location 5,210,742 - 5,391,472
singlet/doubletdoublet
Overlap geneZfhx4
Upstream geneLOC667709, LOC620283
Downstream genePxmp3, EG620382, EG667759, LOC100041165, LOC100041193, EG620570, LOC100041214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284D10.bB6Ng01-284D10.g
ACCGA082974GA082975
length563570
definitionB6Ng01-284D10.b B6Ng01-284D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,390,910 - 5,391,472)(5,210,742 - 5,211,311)
sequence
gaattcaggggatagacgactacctgagactaacaggcttgagtccattt
caacacttctgcttcaatagcccaatataataaaactaggtatagtgtac
agcaaaagtggtcaatgtaatattcattgcgaccacagatttccatctca
tacatacaaagaatggatgaagccatatatttgccaaatcaaacacagaa
aaagccataggaatccacatcagatgctggcctagggtttgtttgtgcac
aagtaaatgtcatgacatgaaggtttgttttcaaagacagtagctttcat
tactgggatttgtccattctagaagatcaaaattacccagcacctaatcc
cttttcaatgatatttcctccttcttaggctgaatcatctgtaaactttt
ggactggattttgtttgaaatgcctcaaatagatgcccttaaaaagggca
aattcctaagtataaggaaaggaagggagggatggacaggggaagaagag
agagagagagagagagagagagaaagagagagagagagagagagagagag
agagagagagaga

gaattcagagtgaggtaaaaggtgttttaaaaggttctgttgcccatccc
tctacatccaagccttcattcccgcagtgcggtcagttgacaaagagacg
cttttcagagaactttaaatctcagtcaggcactcatttcaagaacagaa
agggcggttagttggccatcaggtgcaaggagtcaggggcagagactggg
aatccaggagcacgctccgtgtgcaatccccagacggaaactgtaaactg
cgggctgcagaggaaagagctcgcttctgttataaattaggagttaggtg
aaggttacgcaaagaagaaaagggaaagtaaagctgctaaaagaatagag
taaaacccctgggagttcaacttgaaatccccccctctcactccctaacc
caaggggaggaggaggaagaggaggagagcacattctggtgtgatgagaa
ctctctggaatgtctggaggagaggtttgaagtacgagggtaagaagacc
ccagttgccaaataaatggcaggagagaggtgggggaggggaggaacagt
ggagacttgtcctcattcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_5390910_5391472
seq2: B6Ng01-284D10.b_48_610 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTC  50

seq1  TCTCTCTCTCTCTCTCTTCTTCCCCTGTCCATCCCTCCCTTCCTTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTTCTTCCCCTGTCCATCCCTCCCTTCCTTTCCTT  100

seq1  ATACTTAGGAATTTGCCCTTTTTAAGGGCATCTATTTGAGGCATTTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGGAATTTGCCCTTTTTAAGGGCATCTATTTGAGGCATTTCAAA  150

seq1  CAAAATCCAGTCCAAAAGTTTACAGATGATTCAGCCTAAGAAGGAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCAGTCCAAAAGTTTACAGATGATTCAGCCTAAGAAGGAGGAAA  200

seq1  TATCATTGAAAAGGGATTAGGTGCTGGGTAATTTTGATCTTCTAGAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTGAAAAGGGATTAGGTGCTGGGTAATTTTGATCTTCTAGAATGG  250

seq1  ACAAATCCCAGTAATGAAAGCTACTGTCTTTGAAAACAAACCTTCATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCCAGTAATGAAAGCTACTGTCTTTGAAAACAAACCTTCATGTC  300

seq1  ATGACATTTACTTGTGCACAAACAAACCCTAGGCCAGCATCTGATGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTTACTTGTGCACAAACAAACCCTAGGCCAGCATCTGATGTGGA  350

seq1  TTCCTATGGCTTTTTCTGTGTTTGATTTGGCAAATATATGGCTTCATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGCTTTTTCTGTGTTTGATTTGGCAAATATATGGCTTCATCCA  400

seq1  TTCTTTGTATGTATGAGATGGAAATCTGTGGTCGCAATGAATATTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTATGTATGAGATGGAAATCTGTGGTCGCAATGAATATTACATT  450

seq1  GACCACTTTTGCTGTACACTATACCTAGTTTTATTATATTGGGCTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTTTTGCTGTACACTATACCTAGTTTTATTATATTGGGCTATTGA  500

seq1  AGCAGAAGTGTTGAAATGGACTCAAGCCTGTTAGTCTCAGGTAGTCGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGTGTTGAAATGGACTCAAGCCTGTTAGTCTCAGGTAGTCGTCT  550

seq1  ATCCCCTGAATTC  563
      |||||||||||||
seq2  ATCCCCTGAATTC  563


seq1: chr3_5210742_5211311
seq2: B6Ng01-284D10.g_67_636

seq1  GAATTCAGAGTGAGGTAAAAGGTGTTTTAAAAGGTTCTGTTGCCCATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTGAGGTAAAAGGTGTTTTAAAAGGTTCTGTTGCCCATCCC  50

seq1  TCTACATCCAAGCCTTCATTCCCGCAGTGCGGTCAGTTGACAAAGAGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCCAAGCCTTCATTCCCGCAGTGCGGTCAGTTGACAAAGAGACG  100

seq1  CTTTTCAGAGAACTTTAAATCTCAGTCAGGCACTCATTTCAAGAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGAGAACTTTAAATCTCAGTCAGGCACTCATTTCAAGAACAGAA  150

seq1  AGGGCGGTTAGTTGGCCATCAGGTGCAAGGAGTCAGGGGCAGAGACTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGGTTAGTTGGCCATCAGGTGCAAGGAGTCAGGGGCAGAGACTGGG  200

seq1  AATCCAGGAGCACGCTCCGTGTGCAATCCCCAGACGGAAACTGTAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGGAGCACGCTCCGTGTGCAATCCCCAGACGGAAACTGTAAACTG  250

seq1  CGGGCTGCAGAGGAAAGAGCTCGCTTCTGTTATAAATTAGGAGTTAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTGCAGAGGAAAGAGCTCGCTTCTGTTATAAATTAGGAGTTAGGTG  300

seq1  AAGGTTACGCAAAGAAGAAAAGGGAAAGTAAAGCTGCTAAAAGAATAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTACGCAAAGAAGAAAAGGGAAAGTAAAGCTGCTAAAAGAATAGAG  350

seq1  TAAAACCCCTGGGAGTTCAACTTGAAATCCCCCCCTCTCACTCCCTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCCCTGGGAGTTCAACTTGAAATCCCCCCCTCTCACTCCCTAACC  400

seq1  CAAGGGGAGGAGGAGGAAGAGGAGGAGAGCACATTCTGGTGTGATGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGAGGAGGAGGAAGAGGAGGAGAGCACATTCTGGTGTGATGAGAA  450

seq1  CTCTCTGGAATGTCTGGAGGAGAGGTTTGAAGTACGAGGGTAAGAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGAATGTCTGGAGGAGAGGTTTGAAGTACGAGGGTAAGAAGACC  500

seq1  CCAGTTGCCAAATAAATGGCAGGAGAGAGGTGGGGGAGGGGAGGAACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCCAAATAAATGGCAGGAGAGAGGTGGGGGAGGGGAGGAACAGT  550

seq1  GGAGACTTGTCCAGATTCAC  570
      ||||||||||||  ||||||
seq2  GGAGACTTGTCCTCATTCAC  570


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