BAC Information

Click to search

BAC

Clone NameB6Ng01-284F21
Chromosome3 (Build37)
Map Location 14,434,141 - 14,580,078
singlet/doubletdoublet
Overlap geneLOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5
Upstream geneLOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229
Downstream gene1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F21.bB6Ng01-284F21.g
ACCGA083088GA083089
length1,166959
definitionB6Ng01-284F21.b B6Ng01-284F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,434,141 - 14,435,297)(14,579,117 - 14,580,078)
sequence
gaattcttctgacaaatggagattctccacagatacttaaaagttacact
catacaggaatttatcaaggtcaaggaaataggggggctgtggtactgca
ttattcaagagaaggtctgctagagcagaaccccctggtgctagctttct
caaggctcaaagaagtagcacaaattgtgactagggtgtgaaatccttac
ctgtcattaagctgaccctaagcagagctgttttatctttactgtaaata
ttacctggttcctgtagtccttttgaagtcattcctttgttttgtgtcag
gtaacttcaatgtactttgcctgctgtgacatcctcccccctttattttc
tgtattatgtaagactggtattcactttgtgacaatacattcagattctg
tacaatctcctgtgttgcttctgtctgtcatttattcgccgactccttgt
ccatctgcaacaaaaaaacccttttatgcagataaggaaccaagagggtc
tgcgacaggggcagagatgatgaccctttttattccacccttcaagtggg
ccccagccttctccatggtgataaagaggccaggagactccatgacatac
tcaacaccagcatcaccccatttgatgttagtgggatcttcctcctggaa
gatggtgatgagcttcccattgatgacaagtttcccattctgggccttga
ctgtgccattgaacttgccttgggtggagtcatactggaacatgtagacc
atgtagttgaggtcaatgaaggagtcgttgatggcaacaatctccacgtt
gccatgtggagagcaaacagcagccctggtaaccaggcccccaatatgac
caaatcagttcacaccaaccttcaccattttgtctatggaatgaggctga
cactgcacaagaagatgcaactgtctctggaacagggaggagcagaaaac
caacaaaatgtattcttacccaggatttcctttattttcttgttgctttt
tttatttagatattttttcacttattctatctttgggtaatgaagccaga
aattctatgaagtcttacttatactttagtcatcgtatagtgaacaagaa
tgccctcactccagaattctcagtaatttgaaggcttgacatgagatagt
accctggcttctgtct
gaattcaatacaatttgagtactgtagatgcccattagaggagggaaaga
agaggtgagggtagggtggggggaataaaagtggaaaaaggtcccaggag
taacatttccaaatatgaaccgacactaactggcatctacacccaggaaa
aggggggaatccaagtgccaacaagccagcgcctcccactgggccaggac
aggacactcagcagagttctggaaggcaggcttctcctgttaagactcct
atttcctatgccttggccacccacggtcttgaggatggtaatagcttcaa
gccaggagctgtgaggagtcataagaggctattcgctgtgactgtaaact
agcaattttgtttatttttgaagtattggctctttctgaacctccttgta
ctagctgaattttaattcgcacgatcccatactgttcccctttccctgcg
ttgtggaatccttccaagttttgccaggaacggttaaatcactatgactg
aactgctttaaatggacgttgttgtttgaaaaaaatccgaaccatagcaa
agaacgaagcaaacatccttataaaaccagataaagcttactaagtaatt
tcaccacttagtctgaacggcacaaaatgacccctctctgtgtgaccgca
aatctcaggtctagaaagtagaaagattctaaattaagccaacaaatcca
atcttacttcccaattcttaattctcgatgaagaatgtccccttctaaaa
actactactttagaggaggtgtggaaagtttctcttttcctctttcattc
cgaagaactggcatgaaagttcttcaaacaggatgaagttctgcagagcg
tcggtccttaagcgagtccagagcagaccgcgaattcctgggcgctcgct
ccggtgctccctttgtgaccagggccgcgcgtggccgggtcggtaggggc
ccccgcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14434141_14435297
seq2: B6Ng01-284F21.b_54_1210

seq1  TGACAAATGGAGATTCTCCACAGATACTTAAAAGTTACACTCATACAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGAGATTCTCCACAGATACTTAAAAGTTACACTCATACAGGA  50

seq1  ATTTATCAAGGTCAAGGAAATAGGGGGGCTGTGGTACTGCATTATTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAAGGTCAAGGAAATAGGGGGGCTGTGGTACTGCATTATTCAAG  100

seq1  AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCTCAAGGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCTCAAGGCTCA  150

seq1  AAGAAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTCATTA  200

seq1  AGCTGACCCTAAGCAGAGCTGTTTTATCTTTACTGTAAATATTACCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACCCTAAGCAGAGCTGTTTTATCTTTACTGTAAATATTACCTGGT  250

seq1  TCCTGTAGTCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAGTCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCA  300

seq1  ATGTACTTTGCCTGCTGTGACATCCTCCCCCCTTTATTTTCTGTATTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTTGCCTGCTGTGACATCCTCCCCCCTTTATTTTCTGTATTATG  350

seq1  TAAGACTGGTATTCACTTTGTGACAATACATTCAGATTCTGTACAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGGTATTCACTTTGTGACAATACATTCAGATTCTGTACAATCTC  400

seq1  CTGTGTTGCTTCTGTCTGTCATTTATTCGCCGACTCCTTGTCCATCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGCTTCTGTCTGTCATTTATTCGCCGACTCCTTGTCCATCTGCA  450

seq1  ACAAAAAAACCCTTTTATGCAGATAAGGAACCAAGAGGGTCTGCGACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAACCCTTTTATGCAGATAAGGAACCAAGAGGGTCTGCGACAGG  500

seq1  GGCAGAGATGATGACCCTTTTTATTCCACCCTTCAAGTGGGCCCCAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGATGATGACCCTTTTTATTCCACCCTTCAAGTGGGCCCCAGCCT  550

seq1  TCTCCATGGTGATAAAGAGGCCAGGAGACTCCATGACATACTCAACACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGGTGATAAAGAGGCCAGGAGACTCCATGACATACTCAACACCA  600

seq1  GCATCACCCCATTTGATGTTAGTGGGATCTTCCTCCTGGAAGATGGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACCCCATTTGATGTTAGTGGGATCTTCCTCCTGGAAGATGGTGAT  650

seq1  GAGCTTCCCATTGATGACAAGTTTCCCATTCTGGGCCTTGACTGTGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCCCATTGATGACAAGTTTCCCATTCTGGGCCTTGACTGTGCCAT  700

seq1  TGAACTTGCCTTGGGTGGAGTCATACTGGAACATGTAGACCATGTAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGCCTTGGGTGGAGTCATACTGGAACATGTAGACCATGTAGTTG  750

seq1  AGGTCAATGAAGGAGTCGTTGATGGCAACAATCTCCACGTTGCCATGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATGAAGGAGTCGTTGATGGCAACAATCTCCACGTTGCCATGTGG  800

seq1  AGAGCAAACAGCAGCCCTGGTAACCAGGCCCCCAATATGACCAAATCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAACAGCAGCCCTGGTAACCAGGCCCCCAATATGACCAAATCAGT  850

seq1  TCACACCAACCTTCACCATTTTGTCTATGGAATGAGGCTGACACTGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCAACCTTCACCATTTTGTCTATGGAATGAGGCTGACACTGCACA  900

seq1  AGAAGATGCAACTGTCTCTGGAACAGGGAGGAGCAGAAAACCAACAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGCAACTGTCTCTGGAACAGGGAGGAGCAGAAAACCAACAAAAT  950

seq1  GTATTCTTACCCAGGATTTCCTTTATTTTCTTTGTTTGCTTTTTTATTTA  1000
      |||||||||||||||||||||||||||||| |||||   |||||||||||
seq2  GTATTCTTACCCAGGATTTCCTTTATTTTC-TTGTTGCTTTTTTTATTTA  999

seq1  GATA-TTTTTCACTTATTCTATCTTTGGGTAATGAAAGCCAGAAATTCTA  1049
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATATTTTTTCACTTATTCTATCTTTGGGTAATG-AAGCCAGAAATTCTA  1048

seq1  TGAAGTCTTTACTTTATACTTTAGTCATCGTATAAGTGAACAAG-ATGCC  1098
      ||||||| |||| |||||||||||||||||||| |||||||||| |||||
seq2  TGAAGTC-TTAC-TTATACTTTAGTCATCGTAT-AGTGAACAAGAATGCC  1095

seq1  C-CACTCCAG-ATTCTCCATTATTTGAAAGC-TGACATGAG-TAGTAACC  1144
      | |||||||| ||||||  | ||||||| || ||||||||| |||| |||
seq2  CTCACTCCAGAATTCTCAGTAATTTGAAGGCTTGACATGAGATAGT-ACC  1144

seq1  CTGCTTCCTGTCT  1157
      |||  | ||||||
seq2  CTGGCTTCTGTCT  1157

seq1: chr3_14579117_14580078
seq2: B6Ng01-284F21.g_67_1025 (reverse)

seq1  GATGCGGGGGCCCC-ACCGA-CCGGCCACCGCGCGGCCCTGGCCACAAA-  47
      |||||||||||||| ||||| ||||||| ||||||||||||| |||||| 
seq2  GATGCGGGGGCCCCTACCGACCCGGCCA-CGCGCGGCCCTGGTCACAAAG  49

seq1  GGAGCACCCGGAGCGAGCGCCCAGGAATTCGCGCTCTGCTCTGGACTCGC  97
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAGCA-CCGGAGCGAGCGCCCAGGAATTCGCGGTCTGCTCTGGACTCGC  98

seq1  TTAAGGACCGACCGCTCTGCAGAACTTCATTCCTGTTTTGAAGAACTTTC  147
      ||||||||||| ||||||||||||||||| ||||| ||||||||||||||
seq2  TTAAGGACCGA-CGCTCTGCAGAACTTCA-TCCTG-TTTGAAGAACTTTC  145

seq1  ATGCCAGTTCTTCGGAATGAAAGAGGAAAAGAGAAAACTTTCCACACCTC  197
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGCCAGTTCTTCGGAATGAAAGAGGAAAAGAG-AAACTTTCCACACCTC  194

seq1  CTCTAAAGTAGTAGTTTTTAGAAGGGGACATTCTTCATCGAGAATTAAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGTAGTAGTTTTTAGAAGGGGACATTCTTCATCGAGAATTAAGA  244

seq1  ATTGGGAAGTAAGATTGGATTTGTTGGCTTAATTTAGAATCTTTCTACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAAGTAAGATTGGATTTGTTGGCTTAATTTAGAATCTTTCTACTT  294

seq1  TCTAGACCTGAGATTTGCGGTCACACAGAGAGGGGTCATTTTGTGCCGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACCTGAGATTTGCGGTCACACAGAGAGGGGTCATTTTGTGCCGTT  344

seq1  CAGACTAAGTGGTGAAATTACTTAGTAAGCTTTATCTGGTTTTATAAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAAGTGGTGAAATTACTTAGTAAGCTTTATCTGGTTTTATAAGGA  394

seq1  TGTTTGCTTCGTTCTTTGCTATGGTTCGGATTTTTTTCAAACAACAACGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTTCGTTCTTTGCTATGGTTCGGATTTTTTTCAAACAACAACGT  444

seq1  CCATTTAAAGCAGTTCAGTCATAGTGATTTAACCGTTCCTGGCAAAACTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAAAGCAGTTCAGTCATAGTGATTTAACCGTTCCTGGCAAAACTT  494

seq1  GGAAGGATTCCACAACGCAGGGAAAGGGGAACAGTATGGGATCGTGCGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGATTCCACAACGCAGGGAAAGGGGAACAGTATGGGATCGTGCGAA  544

seq1  TTAAAATTCAGCTAGTACAAGGAGGTTCAGAAAGAGCCAATACTTCAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCAGCTAGTACAAGGAGGTTCAGAAAGAGCCAATACTTCAAAA  594

seq1  ATAAACAAAATTGCTAGTTTACAGTCACAGCGAATAGCCTCTTATGACTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAATTGCTAGTTTACAGTCACAGCGAATAGCCTCTTATGACTC  644

seq1  CTCACAGCTCCTGGCTTGAAGCTATTACCATCCTCAAGACCGTGGGTGGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGCTCCTGGCTTGAAGCTATTACCATCCTCAAGACCGTGGGTGGC  694

seq1  CAAGGCATAGGAAATAGGAGTCTTAACAGGAGAAGCCTGCCTTCCAGAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATAGGAAATAGGAGTCTTAACAGGAGAAGCCTGCCTTCCAGAAC  744

seq1  TCTGCTGAGTGTCCTGTCCTGGCCCAGTGGGAGGCGCTGGCTTGTTGGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGAGTGTCCTGTCCTGGCCCAGTGGGAGGCGCTGGCTTGTTGGCA  794

seq1  CTTGGATTCCCCCCTTTTCCTGGGTGTAGATGCCAGTTAGTGTCGGTTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTCCCCCCTTTTCCTGGGTGTAGATGCCAGTTAGTGTCGGTTCA  844

seq1  TATTTGGAAATGTTACTCCTGGGACCTTTTTCCACTTTTATTCCCCCCAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAAATGTTACTCCTGGGACCTTTTTCCACTTTTATTCCCCCCAC  894

seq1  CCTACCCTCACCTCTTCTTTCCCTCCTCTAATGGGCATCTACAGTACTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTCACCTCTTCTTTCCCTCCTCTAATGGGCATCTACAGTACTCA  944

seq1  AATTGTATTGAATTC  962
      |||||||||||||||
seq2  AATTGTATTGAATTC  959