BAC Information

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BAC

Clone NameB6Ng01-284L01
Chromosome3 (Build37)
Map Location 84,451,845 - 84,593,664
singlet/doubletdoublet
Overlap geneTmem154
Upstream geneLOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L01.bB6Ng01-284L01.g
ACCGA083329GA083330
length1,088908
definitionB6Ng01-284L01.b B6Ng01-284L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,592,584 - 84,593,664)(84,451,845 - 84,452,747)
sequence
gaattcagcagaggcatttcacaagagggtcttacttggctcttctcacc
ttctcttactggctgcctcatgcacactccttccttccccagatccgtga
acctgccccgtgttctcagagcagcaggcagcctgcacagcctgtggctc
agccatgttttcctcacactgtagaatgttgagatggctccactgcactc
cagaccccttctcccttagcttcaacagacagaaacactctatgggtcac
tttgggcttccctgcaggtcttgccgaccactccccagaaaccaggtgca
tctgtccctctcacccactaggtcctccctgcaggacaggacatgacatc
cttttctgcttgtattctgtcctgggaatacttttcagaactaaccaaga
ggggccaagtgaggcacttccttaaagtggagaggtgggaagccagggac
aatggtgtgtgactgtagttccagttactgagaaggccaagactactgag
agggtcactggagcccagaagttctggttgtcctaagcaatgaatatagt
ggcactcttcaccaaagatatgactaattaaaatgtttgaacattgagac
aatatattactatgtaaccctgactggccaagaacttggtatgtagacca
agctggccacaaattcacagagattcatctgtgtctgccttcccagttca
gggattaaaggcatgtgccactatatctagctaaataagtattttagagg
aaaaaaaaaagcctcactagtcaaatgttttcaagtcactgttcaaggta
gtttcagtcattgagcctggcggtatccgttcagttgctttttctctgta
acattccctgatttttcagaactgtagcttacaggatatatcatgtcctg
tacctatattgaatggcctccatttctctaattttaaagaaacaagagta
tagtttgaataagttgtcatttaaaaattaatgcaaaataataataattt
cataaagaaaggaggccaatgaatctgaagagagcaggaggaggcacgtg
agaagcttgtggaggaacaggaggtaggagagaaatgc
gaattccatccagaccactggttcagaaccacggctgtacattggaatca
cctcataatgccagttctccaactcccaggattcccacttgttggcaggt
tctgtggctctaaagtgaagccagcataagaatcacagattttgctgggc
gtggtggcacacgcctttaatcctagcacttggaaggcagaggcaggtgg
atttctgagtccgaggccagcctggtctacagagtgagttccaggacagc
cagagctacacagagaaaccctgtctcaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaggaaccacagattttagcgttgatggagcagct
gaaaagctgggaaggactaggagcctctgttgacagcaaacctagttttt
ctgacttagtagtagccaccctggaaccttgtcctcctcattatgcctaa
taacttcaagttttaagattctcaatggttttaaatattcatttttcccc
ttcagattctcaaaggtccagttacagtagagtgtctgggagaaattatt
aaggcagatctctggccccaccctcagatttctggttcagctgtcgcagt
gtgggttcccagatgtgtgtttctagtcactccccaggctgcaattgctg
ttgctgctccacaaaccattctttcagaactgcctgtcttagctctttcg
gtccccttgattctgaaccgtaagtatgtgccattggagcagtaaaaatt
agagcaggccacacacccaaccagacaggcagggctttctattgggacct
ttctcgagacccctttgactcagccaaatggaaagtaacactgaaaaaag
gtgaccaggtgcttgtttaaacaatgtgctttcttacaacacgaaacaac
actggcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84592584_84593664
seq2: B6Ng01-284L01.b_47_1134 (reverse)

seq1  GCATTTCTCTCTTACCTCCTGTCCTCCCACCAAGCCTTCTCACGTGCCTC  50
      ||||||||||| |||||||||| |  ||| |||| |||||||||||||||
seq2  GCATTTCTCTCCTACCTCCTGTTCCTCCA-CAAG-CTTCTCACGTGCCTC  48

seq1  TCCCTGCTCTCCTTCAGATTCA-TGGCCTCC-TTCTTTATG-AATTATTA  97
        |||||||| ||||||||||| |||||||| ||||||||| ||||||||
seq2  CTCCTGCTCT-CTTCAGATTCATTGGCCTCCTTTCTTTATGAAATTATTA  97

seq1  TTA-TTTGCATTAATTTTT-AATGAC-ACTTATTCAAACTATACTCT--G  142
      ||| ||||||||||||||| |||||| ||||||||||||||||||||   
seq2  TTATTTTGCATTAATTTTTAAATGACAACTTATTCAAACTATACTCTTGT  147

seq1  TTCTTTAAAATTAGAG-AATGGA-GCCATTCAATATAGGTACAGGACATG  190
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  TTCTTTAAAATTAGAGAAATGGAGGCCATTCAATATAGGTACAGGACATG  197

seq1  ATATATCCTGTAAGCTACAGTTCTGAAAAATCAGGGAATGTTACAGAGAA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCTGTAAGCTACAGTTCTGAAAAATCAGGGAATGTTACAGAGAA  247

seq1  AAAGCAACTGAACGGATACCGCCAGGCTCAATGACTGAAACTACCTTGAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACTGAACGGATACCGCCAGGCTCAATGACTGAAACTACCTTGAA  297

seq1  CAGTGACTTGAAAACATTTGACTAGTGAGGCTTTTTTTTTTCCTCTAAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTTGAAAACATTTGACTAGTGAGGCTTTTTTTTTTCCTCTAAAA  347

seq1  TACTTATTTAGCTAGATATAGTGGCACATGCCTTTAATCCCTGAACTGGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTTAGCTAGATATAGTGGCACATGCCTTTAATCCCTGAACTGGG  397

seq1  AAGGCAGACACAGATGAATCTCTGTGAATTTGTGGCCAGCTTGGTCTACA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGACACAGATGAATCTCTGTGAATTTGTGGCCAGCTTGGTCTACA  447

seq1  TACCAAGTTCTTGGCCAGTCAGGGTTACATAGTAATATATTGTCTCAATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGTTCTTGGCCAGTCAGGGTTACATAGTAATATATTGTCTCAATG  497

seq1  TTCAAACATTTTAATTAGTCATATCTTTGGTGAAGAGTGCCACTATATTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATTTTAATTAGTCATATCTTTGGTGAAGAGTGCCACTATATTC  547

seq1  ATTGCTTAGGACAACCAGAACTTCTGGGCTCCAGTGACCCTCTCAGTAGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAGGACAACCAGAACTTCTGGGCTCCAGTGACCCTCTCAGTAGT  597

seq1  CTTGGCCTTCTCAGTAACTGGAACTACAGTCACACACCATTGTCCCTGGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCTTCTCAGTAACTGGAACTACAGTCACACACCATTGTCCCTGGC  647

seq1  TTCCCACCTCTCCACTTTAAGGAAGTGCCTCACTTGGCCCCTCTTGGTTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCTCTCCACTTTAAGGAAGTGCCTCACTTGGCCCCTCTTGGTTA  697

seq1  GTTCTGAAAAGTATTCCCAGGACAGAATACAAGCAGAAAAGGATGTCATG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAAGTATTCCCAGGACAGAATACAAGCAGAAAAGGATGTCATG  747

seq1  TCCTGTCCTGCAGGGAGGACCTAGTGGGTGAGAGGGACAGATGCACCTGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCTGCAGGGAGGACCTAGTGGGTGAGAGGGACAGATGCACCTGG  797

seq1  TTTCTGGGGAGTGGTCGGCAAGACCTGCAGGGAAGCCCAAAGTGACCCAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGGAGTGGTCGGCAAGACCTGCAGGGAAGCCCAAAGTGACCCAT  847

seq1  AGAGTGTTTCTGTCTGTTGAAGCTAAGGGAGAAGGGGTCTGGAGTGCAGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTTCTGTCTGTTGAAGCTAAGGGAGAAGGGGTCTGGAGTGCAGT  897

seq1  GGAGCCATCTCAACATTCTACAGTGTGAGGAAAACATGGCTGAGCCACAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCATCTCAACATTCTACAGTGTGAGGAAAACATGGCTGAGCCACAG  947

seq1  GCTGTGCAGGCTGCCTGCTGCTCTGAGAACACGGGGCAGGTTCACGGATC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCAGGCTGCCTGCTGCTCTGAGAACACGGGGCAGGTTCACGGATC  997

seq1  TGGGGAAGGAAGGAGTGTGCATGAGGCAGCCAGTAAGAGAAGGTGAGAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGGAAGGAGTGTGCATGAGGCAGCCAGTAAGAGAAGGTGAGAAG  1047

seq1  AGCCAAGTAAGACCCTCTTGTGAAATGCCTCTGCTGAATTC  1081
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGTAAGACCCTCTTGTGAAATGCCTCTGCTGAATTC  1088

seq1: chr3_84451845_84452747
seq2: B6Ng01-284L01.g_67_974

seq1  GAATTCCATCCAGACCACTGGTTCAGAACCACGGCTGTACATTGGAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCAGACCACTGGTTCAGAACCACGGCTGTACATTGGAATCA  50

seq1  CCTCATAATGCCAGTTCTCCAACTCCCAGGATTCCCACTTGTTGGCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAATGCCAGTTCTCCAACTCCCAGGATTCCCACTTGTTGGCAGGT  100

seq1  TCTGTGGCTCTAAAGTGAAGCCAGCATAAGAATCACAGATTTTGCTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGCTCTAAAGTGAAGCCAGCATAAGAATCACAGATTTTGCTGGGC  150

seq1  GTGGTGGCACACGCCTTTAATCCTAGCACTTGGAAGGCAGAGGCAGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCACACGCCTTTAATCCTAGCACTTGGAAGGCAGAGGCAGGTGG  200

seq1  ATTTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  250

seq1  CAGAGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAA  300

seq1  AAAAAAAAAAAAAAAAAGGAACCACAGATTTTAGCGTTGATGGAGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAGGAACCACAGATTTTAGCGTTGATGGAGCAGCT  350

seq1  GAGAAGCTGGGAAGGACTAGGAGCCTCTGTTGACAGCAAACCTAGTTTTT  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGGGAAGGACTAGGAGCCTCTGTTGACAGCAAACCTAGTTTTT  400

seq1  CTGACTTAGTAGTAGCCACCCTGGAACCTTGTCCTCCTCATTATGCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTAGTAGTAGCCACCCTGGAACCTTGTCCTCCTCATTATGCCTAA  450

seq1  TAACTTCAAGTTTTAAGATTCTCAATGGTTTTAAATATTCATTTTTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAAGTTTTAAGATTCTCAATGGTTTTAAATATTCATTTTTCCCC  500

seq1  TTCAGATTCTCAAAGGTCCAGTTACAGTAGAGTGTCTGGGAGAAATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTCTCAAAGGTCCAGTTACAGTAGAGTGTCTGGGAGAAATTATT  550

seq1  AAGGCAGATCTCTGGCCCCACCCTCAGATTTCTGGTTCAGCTGTCGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATCTCTGGCCCCACCCTCAGATTTCTGGTTCAGCTGTCGCAGT  600

seq1  GTGGGTTCCCAGATGTGTGTTTCTAGTCACTCCCCAGGCTGCAATTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTCCCAGATGTGTGTTTCTAGTCACTCCCCAGGCTGCAATTGCTG  650

seq1  TTGCTGCTCCACAAACCATTCTTTCAGAACTGCCTGTCTTAGCTCTTTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTCCACAAACCATTCTTTCAGAACTGCCTGTCTTAGCTCTTTCG  700

seq1  GTCCCCTTGATTCTGAACCGTAAGTATGTGCCATTGGAGCAGTAAAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTTGATTCTGAACCGTAAGTATGTGCCATTGGAGCAGTAAAAATT  750

seq1  AGAGCAGGCCACACACCCAACCAGACAGGCAGGGCTTTCTATTGGGACC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAGCAGGCCACACACCCAACCAGACAGGCAGGGCTTTCTATTGGGACCT  800

seq1  TTCTCGAGACCCCTTTGACTCAGGCCAAATGG-AAGTAACACTGAAAAAA  848
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TTCTCGAGACCCCTTTGACTCA-GCCAAATGGAAAGTAACACTGAAAAAA  849

seq1  GGTGACCA-GTGCTTGTTTAAACAATGTGCTTTCTTAC-ACACGAA--CA  894
      |||||||| ||||||||||||||||||||||||||||| |||||||   |
seq2  GGTGACCAGGTGCTTGTTTAAACAATGTGCTTTCTTACAACACGAAACAA  899

seq1  CACTGGCGC  903
      |||||||||
seq2  CACTGGCGC  908