BAC Information

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BAC

Clone NameB6Ng01-285F03
Chromosome3 (Build37)
Map Location 12,034,562 - 12,151,784
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285F03.bB6Ng01-285F03.g
ACCGA083800GA083801
length2141,066
definitionB6Ng01-285F03.b B6Ng01-285F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,034,562 - 12,034,779)(12,150,711 - 12,151,784)
sequence
ctggcccctgaatggacatcattgtctgtcctcagttagagaggatgttc
cttgtcccgcaagaatttgatgtgctttgtgggctgggaaaggtgtggga
ctaaggtggaagggtgtgggagtgggagtgtgggctgattatgttttgac
accaggcatggagtactcaaagggtaaggagattggttttggttttgggc
ttgtgtgagggagt
gaattctgtgattgatacattgtgtgactacacacaaatatttgaaatta
tgcctgaatcaaaattaagtttatttaatgattaagttttcagataacat
tatgcaatttatatgactgggagaaacgattgcatagcattaatgagttc
tatgatttgagtctccagattcagggcgtgccatggaggaagcgtgttgt
tgacaagcaggaaaggcttcagaagctgggaatcggtctgcattgtgttc
actgataactagcaatcacaggaagtccagtgccaaatgaggcaggagca
gaaacagaacaataggactaagctgattaatgttttcaaaagatggattg
caaattacaggatgggaatgttgcttcttgacaaggtgctctattttcaa
caagttctgaaacttatgtacagtgtgacacagtgatatccgtggatatg
acccactgagcagatatgaagaagcatactgaagaatgtaagtgttagaa
cacagtgctcagtagcttgaaatgccactcctgaccctcctcggtatggg
gcttttatctaacttctcagggtctcagacttgtcattagggaacaaagt
attttaaggcataatattaactgtagacagtttataaacttatgccagag
agagcaaatgcagaaaagttctgacagcattaagctattcagaaaataat
ttttttttaaattacaggcataattttttttactataaagtttcagaaca
ttgaagtaattattgttaatttaatgttgtaaaacacaatttatgcattg
agtaaaaaaatttatgcattgagtaaaactattaaagaagaaaataaaat
tgatctgtgggctttgcacagaaaattataaactgtattattagaagtgg
ctggcatgaggaattgggagttacaagtcattttacttcttagctctaag
tcatgaagaaaggcagtaatgacgttctgtaatactgaaagtaagctttg
atgataggggtattcttacacatctactctgctatgcactggggcatgag
cagaagagcagcagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12034562_12034779
seq2: B6Ng01-285F03.b_54_267

seq1  CTGGCCCCTGAATGGACATCATTGTCTGTCCTCAGTTAGAGAGGATGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCCTGAATGGACATCATTGTCTGTCCTCAGTTAGAGAGGATGTTC  50

seq1  CTTGTCCCGCAAGAATTTGATGTGCTTTGTGGGCTGGGAAAGGTGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCCGCAAGAATTTGATGTGCTTTGTGGGCTGGGAAAGGTGTGGGA  100

seq1  CTAAGGTGGAAGGGTGTGGGAGTGGGAGTGTGGGCATGAGTATGTTTTGA  150
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  CTAAGGTGGAAGGGTGTGGGAGTGGGAGTGTGGGC-TGATTATGTTTTGA  149

seq1  CAACCAGGCATGGAGTTCTCAAAGGGGAAGGAGAAGAGGAAATGGTAGGT  200
      | |||||||||||||| ||||||||| |||||| |  ||   ||||   |
seq2  C-ACCAGGCATGGAGTACTCAAAGGGTAAGGAG-ATTGGTTTTGGT-TTT  196

seq1  GGGCTTGTGTGAGGGAGT  218
      ||||||||||||||||||
seq2  GGGCTTGTGTGAGGGAGT  214

seq1: chr3_12150711_12151784
seq2: B6Ng01-285F03.g_68_1133 (reverse)

seq1  GGCTGCCTTGGCTCTTCTGCTCATGCCCCAGTGCATTAGCAAGAGTAGAT  50
      ||||||    ||||||||||||||||||||||||| |||| |||||||||
seq2  GGCTGC---TGCTCTTCTGCTCATGCCCCAGTGCA-TAGC-AGAGTAGAT  45

seq1  GTGTAAGAATACCCCTATCATTCAAAAGCTTACTTTCAGTATTACAGAAC  100
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  GTGTAAGAATACCCCTATCAT--CAAAGCTTACTTTCAGTATTACAGAAC  93

seq1  GTCATTTACTTGCCTTTCTTCATGACTTAGAGCTAAGAAGTAAAATGACT  150
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTCA-TTAC-TGCCTTTCTTCATGACTTAGAGCTAAGAAGTAAAATGACT  141

seq1  TGTAACT-CCAATTCCTCATGCCAGCCACTTCTAATAATACAGTTTATAA  199
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCCCAATTCCTCATGCCAGCCACTTCTAATAATACAGTTTATAA  191

seq1  TTTTCTGTGCAAAGCCCACAGATCAATTTTATTTTCTTCTTTAATAGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGCAAAGCCCACAGATCAATTTTATTTTCTTCTTTAATAGTTT  241

seq1  TACTCAATGCATAAATTTTTTTACTCAATGCATAAATTGTGTTTTACAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAATGCATAAATTTTTTTACTCAATGCATAAATTGTGTTTTACAAC  291

seq1  ATTAAATTAACAATAATTACTTCAATGTTCTGAAACTTTATAGT-AAAAA  348
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTAAATTAACAATAATTACTTCAATGTTCTGAAACTTTATAGTAAAAAA  341

seq1  AATTATGCCTGTAATTTAAAAAAAAATTATTTTCTGAATAGCTTAATGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGCCTGTAATTTAAAAAAAAATTATTTTCTGAATAGCTTAATGCT  391

seq1  GTCAGAACTTTTTCTGCATTTGCTCTCTCTGGCATAAGTTTATAAACTGT  448
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAC-TTTTCTGCATTTGCTCTCTCTGGCATAAGTTTATAAACTGT  440

seq1  CTACAGTTAATATTATGCCTTAAAATACTTTGTTCCCTAATGACAAGTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTAATATTATGCCTTAAAATACTTTGTTCCCTAATGACAAGTCT  490

seq1  GAGACCCTGAGAAGTTAGATAAAAGCCCCATACCGAGGAGGGTCAGGAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTGAGAAGTTAGATAAAAGCCCCATACCGAGGAGGGTCAGGAGT  540

seq1  GGCATTTCAAGCTACTGAGCACTGTGTTCTAACACTTACATTCTTCAGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCAAGCTACTGAGCACTGTGTTCTAACACTTACATTCTTCAGTA  590

seq1  TGCTTCTTCATATCTGCTCAGTGGGTCATATCCACGGATATCACTGTGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCATATCTGCTCAGTGGGTCATATCCACGGATATCACTGTGTC  640

seq1  ACACTGTACATAAGTTTCAGAACTTGTTGAAAATAGAGCACCTTGTCAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTACATAAGTTTCAGAACTTGTTGAAAATAGAGCACCTTGTCAAG  690

seq1  AAGCAACATTCCCATCCTGTAATTTGCAATCCATCTTTTGAAAACATTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACATTCCCATCCTGTAATTTGCAATCCATCTTTTGAAAACATTAA  740

seq1  TCAGCTTAGTCCTATTGTTCTGTTTCTGCTCCTGCCTCATTTGGCACTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTAGTCCTATTGTTCTGTTTCTGCTCCTGCCTCATTTGGCACTGG  790

seq1  ACTTCCTGTGATTGCTAGTTATCAGTGAACACAATGCAGACCGATTCCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGTGATTGCTAGTTATCAGTGAACACAATGCAGACCGATTCCCA  840

seq1  GCTTCTGAAGCCTTTCCTGCTTGTCAACAACACGCTTCCTCCATGGCACG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGAAGCCTTTCCTGCTTGTCAACAACACGCTTCCTCCATGGCACG  890

seq1  CCCTGAATCTGGAGACTCAAATCATAGAACTCATTAATGCTATGCAATCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATCTGGAGACTCAAATCATAGAACTCATTAATGCTATGCAATCG  940

seq1  TTTCTCCCAGTCATATAAATTGCATAATGTTATCTGAAAACTTAATCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCAGTCATATAAATTGCATAATGTTATCTGAAAACTTAATCATT  990

seq1  AAATAAACTTAATTTTGATTCAGGCATAATTTCAAATATTTGTGTGTAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACTTAATTTTGATTCAGGCATAATTTCAAATATTTGTGTGTAGT  1040

seq1  CACACAATGTATCAATCACAGAATTC  1074
      ||||||||||||||||||||||||||
seq2  CACACAATGTATCAATCACAGAATTC  1066