BAC Information

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BAC

Clone NameB6Ng01-285F23
Chromosome3 (Build37)
Map Location 134,083,343 - 134,084,481
singlet/doubletsinglet
Overlap genenone
Upstream geneE130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1
Downstream geneLOC100039234, Tacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285F23.bB6Ng01-285F23.g
ACCGA083838GA083839
length1,145593
definitionB6Ng01-285F23.b B6Ng01-285F23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacatttgtcttagtcagtggtttcctgaaaacctgattgttcc
ataggcaacacctgtgacttctggcaaggtgagtgccagttacagagtga
tcttaaaagtaccttgcacacatagcttttgggaaaaagttgaaaattaa
gggagacgcatatctgtatggaaggttatttgatttctgggtcctttcac
acaaaagctgtaagtgtgtggtggcagagaaaagataagtctcagaaagt
tcaacacattatggccataattttgaaacaaagttggcagaatttttaga
atactggagagaagaaagccatagtttgggaggagggagggcaaaagctc
tgtgaataaataaggtttgtgcctcttttgcctcctggttgatttgagat
tgaagaaggctataaacattcttaactgaggtaggagccagcaccaacag
ctaccgtgatgattcaaccataaggaaaaatattaacttctgggtaaaat
aaaatattaaaatctattagaaaagttgtacaaagtccagactttataca
acaggtactcacagtataaattaactgactgtttcgtggaggatgatcac
aataatgtacacaccatgagtaaaagctgctgggtagaggagcctctgtg
gacacaggtcacagaaaagaacaaatgtgtaattatagtcatagtaaact
caagcgtatgaataggattagaagtagcaaaggaactcacacaatatgta
ctcactgataagtggatattagccccaaacctaggattcccaagatataa
ggtacaatttgctaaacacatgaaactcaagaagaatgaagactgaagtg
tggacactatgcccctcattagaattgggaacaaaacacccatggaaagg
agttacagagacaaagttggagctgagatgaaaggatggaccatgtagag
actgccatatccagggatccaccccatatcagcatccaacgctgacaccc
attgcataaccctagcaagatttatgaaaggtacccagatgtagcctgtc
ttctgcgagacctatgccgggcctagctacacagtagtggatgcctctac
cagtcccgtctattgaatgatctaccagggcttcccaatggagga

gaattctttgttcagctctgagccacatttttaaatgtggttatttgatt
ttctggagcccaccttcttgagttctttatatatgtattggatattagtc
ccctatctgatttaggataggtaaagatcctttcccaatctgttggtggt
ttacagagacaaagtttggagctgtgatgaaaggatggaccatctagaga
ctgccatatccggggatccatcccataatcagcttccatatgctgacacc
aatgcacacactagcaagattctgctgaaaggacccagatagaactgtct
cttgtgagactatgccggggcccagcaaacatagaagtggatgctcacag
tcagctattggatggatcacagggcccccaatggaggagctggaggaagt
accgaaggagctaaagggatctgcaaccctataggtggaacaacattatg
aactaaccagtacctcggagctcttgactctagctgcatatgtatcaaaa
gatggcctagtcggccatcactggaaagagaggcccattggacttgcaaa
ctttatattccccagtacaggggaatgccagggcccaaaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134083343_134084481
seq2: B6Ng01-285F23.b_46_1190

seq1  GAATTCTACATTTGTCTTAGTCAGTGGTTTCCTGAAAACCTGATTGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATTTGTCTTAGTCAGTGGTTTCCTGAAAACCTGATTGTTCC  50

seq1  ATAGGCAACACCTGTGACTTCTGGCAAGGTGAGTGCCAGTTACAGAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAACACCTGTGACTTCTGGCAAGGTGAGTGCCAGTTACAGAGTGA  100

seq1  TCTTAAAAGTACCTTGCACACATAGCTTTTGGGAAAAAGTTGAAAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAGTACCTTGCACACATAGCTTTTGGGAAAAAGTTGAAAATTAA  150

seq1  GGGAGACGCATATCTGTATGGAAGGTTATTTGATTTCTGGGTCCTTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACGCATATCTGTATGGAAGGTTATTTGATTTCTGGGTCCTTTCAC  200

seq1  ACAAAAGCTGTAAGTGTGTGGTGGCAGAGAAAAGATAAGTCTCAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTGTAAGTGTGTGGTGGCAGAGAAAAGATAAGTCTCAGAAAGT  250

seq1  TCAACACATTATGGCCATAATTTTGAAACAAAGTTGGCAGAATTTTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACATTATGGCCATAATTTTGAAACAAAGTTGGCAGAATTTTTAGA  300

seq1  ATACTGGAGAGAAGAAAGCCATAGTTTGGGAGGAGGGAGGGCAAAAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGAGAGAAGAAAGCCATAGTTTGGGAGGAGGGAGGGCAAAAGCTC  350

seq1  TGTGAATAAATAAGGTTTGTGCCTCTTTTGCCTCCTGGTTGATTTGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAAATAAGGTTTGTGCCTCTTTTGCCTCCTGGTTGATTTGAGAT  400

seq1  TGAAGAAGGCTATAAACATTCTTAACTGAGGTAGGAGCCAGCACCAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGGCTATAAACATTCTTAACTGAGGTAGGAGCCAGCACCAACAG  450

seq1  CTACCGTGATGATTCAACCATAAGGAAAAATATTAACTTCTGGGTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGTGATGATTCAACCATAAGGAAAAATATTAACTTCTGGGTAAAAT  500

seq1  AAAATATTAAAATCTATTAGAAAAGTTGTACAAAGTCCAGACTTTATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAAAATCTATTAGAAAAGTTGTACAAAGTCCAGACTTTATACA  550

seq1  ACAGGTACTCACAGTATAAATTAACTGACTGTTTCGTGGAGGATGATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACTCACAGTATAAATTAACTGACTGTTTCGTGGAGGATGATCAC  600

seq1  AATAATGTACACACCATGAGTAAAAGCTGCTGGGTAGAGGAGCCTCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTACACACCATGAGTAAAAGCTGCTGGGTAGAGGAGCCTCTGTG  650

seq1  GACACAGGTCACAGAAAAGAACAAATGTGTAATTATAGTCATAGTAAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGTCACAGAAAAGAACAAATGTGTAATTATAGTCATAGTAAACT  700

seq1  CAAGCGTATGAATAGGATTAGAAGTAGCAAAGGAACTCACACAATATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGTATGAATAGGATTAGAAGTAGCAAAGGAACTCACACAATATGTA  750

seq1  CTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATTCCCAAGATATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATTCCCAAGATATAA  800

seq1  GGTACAATTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAATTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTG  850

seq1  TGGACACTATGCCCCTCATTAGAATTGGGAACAAAACACCCATGG-AAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGACACTATGCCCCTCATTAGAATTGGGAACAAAACACCCATGGAAAGG  900

seq1  AGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGA  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTACAGAGACAAAG-TTGGAGCTGAGATGAAAGGATGGACCATGTAGA  949

seq1  GACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACA  999
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GACTGCCATATCCAGGGATCCACCCCAT-ATCAGCATCC-AACGCTGACA  997

seq1  -CCATTGCAT-ACCCTAGCAAGATTTTATTGAAAGTACCCAGATGTAG-C  1046
       ||||||||| |||||||||||| |||||  || |||||||||||||| |
seq2  CCCATTGCATAACCCTAGCAAGA-TTTATGAAAGGTACCCAGATGTAGCC  1046

seq1  TGTCTCTTGTGAGA-CTATGCCGGGGCCTAGCAAACACAGAAGTGGATG-  1094
      |||||  || |||| ||||||| |||||||||  |||||| |||||||| 
seq2  TGTCTTCTGCGAGACCTATGCC-GGGCCTAGC-TACACAGTAGTGGATGC  1094

seq1  --CTCACAGT--CAGCTAATGGATGGATC--ACAGGGC-TCCCAATGGAG  1137
        ||  ||||  |  ||| || || ||||   |||||| |||||||||||
seq2  CTCTACCAGTCCCGTCTATTGAAT-GATCTACCAGGGCTTCCCAATGGAG  1143

seq1  GA  1139
      ||
seq2  GA  1145


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