BAC Information

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BAC

Clone NameB6Ng01-287B22
Chromosome3 (Build37)
Map Location 77,959,719 - 78,038,827
singlet/doubletdoublet
Overlap genenone
Upstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
Downstream geneLOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287B22.bB6Ng01-287B22.g
ACCGA085131GA085132
length4301,157
definitionB6Ng01-287B22.b B6Ng01-287B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,959,719 - 77,960,153)(78,037,666 - 78,038,827)
sequence
aaagccagcctggtctacagagcaagttttaggacagtcaatgctacaca
gagaaaccatgagaaaaagaaagaaggaagaaaggaaggaaggaaggaag
gaaggaaggaaggaaggaaggaaggggaagggaaggaagaaaggaaggaa
ggaaagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agatagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaat
taaactgtttgggtcaccactaacagaaaatttaaaatgtcttaatgcta
attcaccactaatgcttaaccatatatttttagtgctgtatactgaatcc
aaagcccactacactgctacaccttgcccacaatctcgatcctaagagct
gtgttagtgctaatagtccaggtaggcttc
gaattcaagagatgttaaactatgatttttttttaaagaacacataaaat
ggcaagataaaaagaaatgtttaacttgcataaggtatactatagttcca
aggctgctggaatgtgtttcttagaaatgataggatataggataatggat
agaaaatacgaacatcaaatatattacttctcagaatatcatctaaccca
agtgttattcaaaaaggccaacttttcttctaaaatttacatatttgaca
tttatgcgctgaggttatttctctatattcatggatacaaagattcccac
tgactcccatgatagctctaaatatactctgtgtatcacagtcttctgca
gcaaacatatctgcccttccactaaggcagagttactgaaatgagcaaat
ttttaactttattaaattgtattgtcccttttcaggaaaagacaaagcta
gtattcattaatagagttatacttctttattggagattgtcttgtggtac
ttgatatatgtgtaaacaaggcacactcaatattctaaagaatatatttt
tgtcatatatcatatatatattcactttagtaaaatgttgaatctaaata
gcaattaaattagtaattttcttcaacctaagcagtctactttgaaaaat
gttatgacttttgaatattattttcagtgtagattacttgtgatagatta
atattttcctgtgttttaagattgtattgtgtatccaagatacctgctaa
aattataaggctgtaattggattatttgaattttagaggaggaattttga
aaggtaaattataataatagttttatttttttaatttcagtaaagcctac
aggtcaaatttctgttcacataatttataactgagttgctagaatgtaga
tcttcaagaactctggaaaggcaaagtagcaaaagcaaggtattttacct
caccaatcccaggctcagccagatggccactgaactgattgagcaaaaga
gaatagtattttgtaatgctactataacatgcctctccgccctactcctc
cagcgagtacagaagatcaaactaacatgtccacctacagtttcttattt
tccctctgcatttaatatttggcctctcctccacaaatacgcctcatggg
ctcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77959719_77960153
seq2: B6Ng01-287B22.b_47_482

seq1  GAATTCAAAGCCAGCCTGGTCTACAGAGCAAGTTTTAGGACAGTCAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAGCCTGGTCTACAGAGCAAGTTTTAGGACAGTCAATGC  50

seq1  TACACAGAGAAACCATGAGAAAAAGAAAGAAGGAAGAAAGGAAGGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCATGAGAAAAAGAAAGAAGGAAGAAAGGAAGGAAGGA  100

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAGAAAGG  150

seq1  AAGGAAGGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  250

seq1  AGAAATTAAACTGTTTGGGTCACCACTAACAGAAAATTTAAAATGTTTTA  300
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGAAATTAAACTGTTTGGGTCACCACTAACAGAAAATTTAAAATGTCTTA  300

seq1  ATGCTAATTCACCACTAATGCTTAACCATATATTTTTAGTGCTGTATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATTCACCACTAATGCTTAACCATATATTTTTAGTGCTGTATACT  350

seq1  GAATCCAAAGCCCACTACACTGCTACACCTTGCCCACAATCTCGATCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAAAGCCCACTACACTGCTACACCTTGCCCACAATCTCGATCCTA  400

seq1  AGAGCTGTGTTAGTGCTAATAGT-CAGGTAGGCTTC  435
      ||||||||||||||||||||||| ||||||||||||
seq2  AGAGCTGTGTTAGTGCTAATAGTCCAGGTAGGCTTC  436

seq1: chr3_78037666_78038827
seq2: B6Ng01-287B22.g_65_1221 (reverse)

seq1  AGATGAGCCCATGAGGGGTATTTTGTTGAAGAGAAGACAAATATAAAAGG  50
      |||||||||||||||| ||| ||||| || |||| | ||||||| ||| |
seq2  AGATGAGCCCATGAGGCGTA-TTTGTGGAGGAGAGGCCAAATATTAAATG  49

seq1  CAGAGGAAAAAATAAGAAA-TGTAGGT-GACATGTAAGTTTGTATCTTCC  98
      ||||||  ||||||||||| ||||||| ||||||| |||||| ||||| |
seq2  CAGAGG-GAAAATAAGAAACTGTAGGTGGACATGTTAGTTTG-ATCTT-C  96

seq1  TGGTTACTCGCTGGAGGAGTAAGGGCGGGAGAGGCATGTTATAGTAGCAT  148
      ||  |||||||||||||||| ||||| |||||||||||||||||||||||
seq2  TG--TACTCGCTGGAGGAGT-AGGGC-GGAGAGGCATGTTATAGTAGCAT  142

seq1  TAC-AAATACTATTCTC-TGTGCTCAATCAGTTCAGTGGCCATCTTGGCT  196
      ||| ||||||||||||| | |||||||||||||||||||||||| |||||
seq2  TACAAAATACTATTCTCTTTTGCTCAATCAGTTCAGTGGCCATC-TGGCT  191

seq1  GAGCCTGGGATTGGTGAGGTAAAATACCTTGCTTTTGCTACTTTGCCTTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGGATTGGTGAGGTAAAATACCTTGCTTTTGCTACTTTGCCTTT  241

seq1  CCAGAGTTCTTGAAGATCTACATTCTAGCAACTCAGTTATAAATTATGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTCTTGAAGATCTACATTCTAGCAACTCAGTTATAAATTATGTG  291

seq1  AACAGAAATTTGACCTGTAGGCTTTACTGAAATTAAAAAAATAAAACTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATTTGACCTGTAGGCTTTACTGAAATTAAAAAAATAAAACTAT  341

seq1  TATTATAATTTACCTTTCAAAATTCCTCCTCTAAAATTCAAATAATCCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAATTTACCTTTCAAAATTCCTCCTCTAAAATTCAAATAATCCAA  391

seq1  TTACAGCCTTATAATTTTAGCAGGTATCTTGGATACACAATACAATCTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCCTTATAATTTTAGCAGGTATCTTGGATACACAATACAATCTTA  441

seq1  AAACACAGGAAAATATTAATCTATCACAAGTAATCTACACTGAAAATAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGGAAAATATTAATCTATCACAAGTAATCTACACTGAAAATAAT  491

seq1  ATTCAAAAGTCATAACATTTTTCAAAGTAGACTGCTTAGGTTGAAGAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAAGTCATAACATTTTTCAAAGTAGACTGCTTAGGTTGAAGAAAA  541

seq1  TTACTAATTTAATTGCTATTTAGATTCAACATTTTACTAAAGTGAATATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATTTAATTGCTATTTAGATTCAACATTTTACTAAAGTGAATATA  591

seq1  TATATGATATATGACAAAAATATATTCTTTAGAATATTGAGTGTGCCTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATATATGACAAAAATATATTCTTTAGAATATTGAGTGTGCCTTG  641

seq1  TTTACACATATATCAAGTACCACAAGACAATCTCCAATAAAGAAGTATAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATATATCAAGTACCACAAGACAATCTCCAATAAAGAAGTATAA  691

seq1  CTCTATTAATGAATACTAGCTTTGTCTTTTCCTGAAAAGGGACAATACAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTAATGAATACTAGCTTTGTCTTTTCCTGAAAAGGGACAATACAA  741

seq1  TTTAATAAAGTTAAAAATTTGCTCATTTCAGTAACTCTGCCTTAGTGGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAGTTAAAAATTTGCTCATTTCAGTAACTCTGCCTTAGTGGAA  791

seq1  GGGCAGATATGTTTGCTGCAGAAGACTGTGATACACAGAGTATATTTAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGATATGTTTGCTGCAGAAGACTGTGATACACAGAGTATATTTAGA  841

seq1  GCTATCATGGGAGTCAGTGGGAATCTTTGTATCCATGAATATAGAGAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCATGGGAGTCAGTGGGAATCTTTGTATCCATGAATATAGAGAAAT  891

seq1  AACCTCAGCGCATAAATGTCAAATATGTAAATTTTAGAAGAAAAGTTGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGCGCATAAATGTCAAATATGTAAATTTTAGAAGAAAAGTTGGC  941

seq1  CTTTTTGAATAACACTTGGGTTAGATGATATTCTGAGAAGTAATATATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAATAACACTTGGGTTAGATGATATTCTGAGAAGTAATATATTT  991

seq1  GATGTTCGTATTTTCTATCCATTATCCTATATCCTATCATTTCTAAGAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCGTATTTTCTATCCATTATCCTATATCCTATCATTTCTAAGAAA  1041

seq1  CACATTCCAGCAGCCTTGGAACTATAGTATACCTTATGCAAGTTAAACAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCCAGCAGCCTTGGAACTATAGTATACCTTATGCAAGTTAAACAT  1091

seq1  TTCTTTTTATCTTGCCATTTTATGTGTTCTTTAAAAAAAAATCATAGTTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTATCTTGCCATTTTATGTGTTCTTTAAAAAAAAATCATAGTTT  1141

seq1  AACATCTCTTGAATTC  1162
      ||||||||||||||||
seq2  AACATCTCTTGAATTC  1157