BAC Information

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BAC

Clone NameB6Ng01-287L02
Chromosome3 (Build37)
Map Location 131,550,641 - 131,551,665
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545568, Lef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1
Downstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287L02.g
ACCGA085546
length1,028
definitionB6Ng01-287L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattgtttgatgaaaaaactggggtatgtaataaaaccttgatg
aaccctacttgctcttcaggagaatgggatgacaattccctactgagaag
acattcttgtgagaatggaaagggacagtgcccttagagcactggacttt
aagaagcaaatgccagcctgaccccgttccttccttctttaataggcaca
gcacacaaactttggactgcccaggcggatggctgacgaaaacctgaact
ttaactgcatctggtacaaatgcggagttcccaggcacgaggctctcttt
ctgtgaaaagagggcactcctttctcacttggatattttcattctgtagc
tgtttgagaccttaggaagcattcccatgaccttgcaaacaactgttcat
acttgacttagttcccctaatttaagataataatatctctctctctgctc
tgtctctctctctccctccccttttacttcactcttttatctcccttcct
ccctcctcactctttcctctctcttccttcttctcttatgacctcccctc
tcttcttttctagtattaacacttattgagaaatgcaatttttgaaattt
aagagttacaagcctcctcatttgtcccaacaaaagagattgtgcttgga
ctgaaaactctgtcccctgtcatttccttctcaccaccatattttttttt
ccttgaaacattaatgaaggacacttagctgtgtttctaattctacactg
gttactacttttacagaatggaaagagaaatgatattggataattcacat
atcctactattcattatgatgagagattaatttcaattacatttctagat
gctgtttccaaaagtaccctactccctcccacatacactcgtccaacaaa
cccactcacaacttttcgccctagcgatcacctggtactgaggcatatga
aagtctagcatgaccaatagtcctctcttgtctgacagtcatcttcagaa
ttcatatgcagctcgagacatgatctcg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_131550641_131551665
seq2: B6Ng01-287L02.g_67_1094

seq1  GAATTCCATTGTTTGTATAGAAGAACTGGGGTATATAATAGAACCTTGAT  50
      ||||||||||||||| ||  || ||||||||||| ||||| |||||||||
seq2  GAATTCCATTGTTTG-ATGAAAAAACTGGGGTATGTAATAAAACCTTGAT  49

seq1  GAACCCAGCTTGCTCTTCAGGAGAATGGGATGACAATTCCCTACTGAGAA  100
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTACTTGCTCTTCAGGAGAATGGGATGACAATTCCCTACTGAGAA  99

seq1  GACATTCTTGTGAGAATGGAAAGGGACAGTGCCCTTAGAGCACTGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTTGTGAGAATGGAAAGGGACAGTGCCCTTAGAGCACTGGACTT  149

seq1  TAGGAGGCAGAGTCCAGCCAGACCCCGTTCCTTCCTTCTTTACATAGGCA  200
      || || ||| |  |||||| |||||||||||||||||||||| |||||||
seq2  TAAGAAGCAAATGCCAGCCTGACCCCGTTCCTTCCTTCTTTA-ATAGGCA  198

seq1  CAGCACACAGACTTTGGACTGCCCAGGCGGATGGCTGACGAGAACCTGAA  250
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  CAGCACACAAACTTTGGACTGCCCAGGCGGATGGCTGACGAAAACCTGAA  248

seq1  CTTTAACTGCATCTGGTACAAATGCAGAGTTCCCAGGCACGAGGCTCTCT  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTTTAACTGCATCTGGTACAAATGCGGAGTTCCCAGGCACGAGGCTCTCT  298

seq1  TTCTGTGAAAAGAGGGCACTCCTTTCTCACTTGGATATTTTCATTCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAAAAGAGGGCACTCCTTTCTCACTTGGATATTTTCATTCTGTA  348

seq1  GCTTTTTGAGACCTTAGGAAGCATTCCCATGACCTTGCAAACAACTGTTC  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGAGACCTTAGGAAGCATTCCCATGACCTTGCAAACAACTGTTC  398

seq1  ATACTTGACTTAGTTCCCCTAATTTAAAATAATAATATCTCTCTCTCTGC  450
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATACTTGACTTAGTTCCCCTAATTTAAGATAATAATATCTCTCTCTCTGC  448

seq1  TCTGTCTCTCTCTCTCCCTCCCCTTTTACTTCTCTCTTTTATCTCCCTTC  500
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTGTCTCTCTCTCTCCCTCCCCTTTTACTTCACTCTTTTATCTCCCTTC  498

seq1  CTCCCTCCTCTCTCTTTCCTCTCTCTTCCTTCTTCTCTTTTGACCTCCCC  550
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  CTCCCTCCTCACTCTTTCCTCTCTCTTCCTTCTTCTCTTATGACCTCCCC  548

seq1  TCTCTTCTTTTCTAGTATTTACACTTCTTTAGAAATGCAATTTTTGAAAT  600
      ||||||||||||||||||| |||||| || ||||||||||||||||||||
seq2  TCTCTTCTTTTCTAGTATTAACACTTATTGAGAAATGCAATTTTTGAAAT  598

seq1  TTAAGAGTTACAGGCCTCCTCAGTTGTCCCAACAGTAAGAGATTGTGCTT  650
      |||||||||||| ||||||||| |||||||||||  ||||||||||||||
seq2  TTAAGAGTTACAAGCCTCCTCATTTGTCCCAACA-AAAGAGATTGTGCTT  647

seq1  GGACTGAAAACTCTGTCCCCAGTCATTTCCTTCTCACCACCATATTTTTT  700
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGACTGAAAACTCTGTCCCCTGTCATTTCCTTCTCACCACCATATTTTTT  697

seq1  TTTCCTTGAAACATTAATGAAGGACACTTAGCTGTGTTTCTAATTCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGAAACATTAATGAAGGACACTTAGCTGTGTTTCTAATTCTACA  747

seq1  CTGGTTACTACTTTTACAGAATGGAAAGAGAAATGATATTGGATAATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTACTACTTTTACAGAATGGAAAGAGAAATGATATTGGATAATTCA  797

seq1  CATATTCTTTTATT-ATTATTATTAGGTATTTATTTCATTTACATTTCTA  849
      ||||| ||  |||| ||||| || ||  ||| |||||| |||||||||||
seq2  CATATCCTACTATTCATTATGATGAGAGATTAATTTCAATTACATTTCTA  847

seq1  -ATGCTG-TCCCAAAAGTCCCCTACTCCCTCCCACACCCACTC-CCCCAC  896
       |||||| | |||||||| |||||||||||||||||  |||||  || ||
seq2  GATGCTGTTTCCAAAAGTACCCTACTCCCTCCCACATACACTCGTCCAAC  897

seq1  CAACCCACTCCCACCTCTTGGCCCTGGCGTTCCCCT-GTACTGAGGCATA  945
       ||||||||| || || || ||||| ||| || ||| |||||||||||||
seq2  AAACCCACTCACAACTTTTCGCCCTAGCGATCACCTGGTACTGAGGCATA  947

seq1  T-AAGGTCT-GCATGACCAATGGCCCTCTCTTTTCTGACCAGGCCATCTT  993
      | || |||| ||||||||||| | |||||||| ||||||   | ||||||
seq2  TGAAAGTCTAGCATGACCAATAGTCCTCTCTTGTCTGAC--AGTCATCTT  995

seq1  CTG-ATACATATGCAGCTAGAGACATGAGCTCG  1025
      | | || ||||||||||| ||||||||| ||||
seq2  CAGAATTCATATGCAGCTCGAGACATGATCTCG  1028