BAC Information

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BAC

Clone NameB6Ng01-287N16
Chromosome3 (Build37)
Map Location 56,954,974 - 56,956,159
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040139, LOC666585
Downstream geneTm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287N16.bB6Ng01-287N16.g
ACCGA085667GA085668
length8721,185
definitionB6Ng01-287N16.b B6Ng01-287N16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgagtatttttgcatcaatattcataagcaagattggtttg
aagttctctttttcgattgggtccttgtgtagtttaggtatgttggacct
tcattttcattaaattctaaaaagtctttaatttctttctttcttttttt
ccctgatcaagttatcactaagtagagagttgttcagtttccacatgttt
gtgggttttttgttgttattgaagatcagccttaggctacagtgatctga
tagaatggatgggattatttcaatcttgtattagataagggttattttgt
gaccaattatacggtcaattctggagaaggtatcatgaggtgtgagaaga
aggtgtattcatttttttttagggtgaaatgttctgtagatatctgttaa
acccattgggttcataacctctattagtttcactgtgtctatatttagtt
tctgtttcagtgacctgtctattggtgaaagtggggtgttgaaatctcct
actattattgtgtgaggttcaatgtgtgtttgagctttagtaaagtttct
tttatgaatgtgggtgccctggcacttggggcatagatgttcagaattaa
gactttgtcttggtggagtttccctttgatgaatatgaagtgtccttctt
catcacgtttgataactttttggttgagtctattttattggatattagta
tggcaactccagcttgtttcctgggaccattttgcttggaagaccttttt
ccatcctttatgctgagatagtgtctgtctttgtcattgaggtttattct
tgcatgcagcaaaatgttgaatcttgtttgtgtatccagtctgttagtta
tatctttttataggtgaagttg

gaattcctccttatgcaaaggaggcatccccagaaacctggccctggcca
atgaaatacacttactcccaaagaccctacccagcctccaaagctttaag
taccatttgttccccctattaaaccaattgtctctttgaagctgcctccc
gagggagggtctgttctctctaagctcaccaccgcctgaggtctcttctg
ctcccagccattcctgctccacttcccctctcaggatctactggttgtaa
ggggtggctaatcatgctgcagttggtctgggaagtgaagccagaatggc
atagtggtatcagcaaagagttctaataccagggaaattgtcattttctt
tttttttcttttatttctttctttatttacatttcaaatgttatcccctt
tcccagtctctccccacccactgtggaaaaatccttatcccatccccctc
tgcttctacgagtataagggtgttcccccacctactcacccactcctgcc
tctctgccctagcatccccctacactgtggcatcaagctttcacagcacc
aagggcctcccctcccagttgatgtcctaaaaggccatcctctgctgcat
aagcagctggagccatgggtccctccatgtgtactctttggttggtgatt
tagtccctgggagctctggagggtctcgttggtttatattgttgttcttc
ctatggggttgcaaactccttcaactccttcagtcctttctctaactcat
ctatcagagaaattgtcattttctaaagagaaaattttagttatgaaaag
gtcacattttattttaaaaaaaaaaggttcaagaagggaattaaatgatg
tctaagctgtgctgagaccaggatgtagaggttacagaaagcatgtcaca
cgacatttcagcataagcaaagggcaggaaatagaattgtgggtgccact
ggcctatggctttaaataaaagaagggtatccagccagtatcttcaaata
catgctaagcagatccagaaaacaccaaaacatggtgctcaggtactaca
ggatgcttcagagactcactttcagttccttcaagctacctgtccatgct
ggtgacctctttctgaggctaatgaggttcaggttaaaatctacactggt
acaatatagctccacaagaaacgtgtctcctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56954974_56956159
seq2: B6Ng01-287N16.g_69_1253

seq1  GAATTCCTCCTTATGCAAAGGAGGCATCCCCAGAAACCTGGCCCTGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTATGCAAAGGAGGCATCCCCAGAAACCTGGCCCTGGCCA  50

seq1  ATGAAATACACTTACTCCCAAAGACCCTACCCAGCCTCCAAAGCTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATACACTTACTCCCAAAGACCCTACCCAGCCTCCAAAGCTTTAAG  100

seq1  TACCATTTGTTCCCCCTATTAAACCAATTGTCTCTTTGAAGCTGCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTGTTCCCCCTATTAAACCAATTGTCTCTTTGAAGCTGCCTCCC  150

seq1  GAGGGAGGGTCTGTTCTCTCTAAGCTCACCACCGCCTGAGGTCTCTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGTCTGTTCTCTCTAAGCTCACCACCGCCTGAGGTCTCTTCTG  200

seq1  CTCCCAGCCATTCCTGCTCCACTTCCCCTCTCAGGATCTACTGGTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGCCATTCCTGCTCCACTTCCCCTCTCAGGATCTACTGGTTGTAA  250

seq1  GGGGTGGCTAATCATGCTGCAGTTGGTCTGGGAAGTGAAGCCAGAATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGCTAATCATGCTGCAGTTGGTCTGGGAAGTGAAGCCAGAATGGC  300

seq1  ATAGTGGTATCAGCAAAGAGTTCTAATACCAGGGAAATTGTCATTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGTATCAGCAAAGAGTTCTAATACCAGGGAAATTGTCATTTTCTT  350

seq1  TTTTTTTCTTTTATTTCTTTCTTTATTTACATTTCAAATGTTATCCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTTTATTTCTTTCTTTATTTACATTTCAAATGTTATCCCCTT  400

seq1  TCCCAGTCTCTCCCCACCCACTGTGGAAAAATCCTTATCCCATCCCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCTCTCCCCACCCACTGTGGAAAAATCCTTATCCCATCCCCCTC  450

seq1  TGCTTCTACGAGTATAAGGGTGTTCCCCCACCTACTCACCCACTCCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTACGAGTATAAGGGTGTTCCCCCACCTACTCACCCACTCCTGCC  500

seq1  TCTCTGCCCTAGCATCCCCCTACACTGTGGCATCAAGCTTTCACAGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCTAGCATCCCCCTACACTGTGGCATCAAGCTTTCACAGCACC  550

seq1  AAGGGCCTCCCCTCCCAGTTGATGTCCTAAAAGGCCATCCTCTGCTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCTCCCCTCCCAGTTGATGTCCTAAAAGGCCATCCTCTGCTGCAT  600

seq1  AAGCAGCTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATT  650

seq1  TAGTCCCTGGGAGCTCTGGAGGGTCTCGTTGGTTTATATTGTTGTTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCTGGGAGCTCTGGAGGGTCTCGTTGGTTTATATTGTTGTTCTTC  700

seq1  CTATGGGGTTGCAAACTCCTTCAACTCCTTCAGTCCTTTCTCTAACTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGGTTGCAAACTCCTTCAACTCCTTCAGTCCTTTCTCTAACTCAT  750

seq1  CTATCAGAGAAATTGTCATTTTCTAAAGAGAAAATTTTAGTTATGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGAGAAATTGTCATTTTCTAAAGAGAAAATTTTAGTTATGAAAAG  800

seq1  GTCACATTTTATTTTAAAAAAAAAAGGTTCAAGAAGGGAATTAAATGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTTTATTTTAAAAAAAAAAGGTTCAAGAAGGGAATTAAATGATG  850

seq1  TCTAAGCTGTGCTGAGACCAGGATGTAGAGGTTACAGAAAGCATGTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTGTGCTGAGACCAGGATGTAGAGGTTACAGAAAGCATGTCACA  900

seq1  CGACATTTCAGCATAAGCAAAGGGCAGGAAATAGAATTGTGGGTGCCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATTTCAGCATAAGCAAAGGGCAGGAAATAGAATTGTGGGTGCCACT  950

seq1  GGCCTATGGCTTTAAAT-AAAGAAGGGTTATCCAGCCCAGTATCTTCAAA  999
      ||||||||||||||||| ||||||||| ||||||| ||||||||||||||
seq2  GGCCTATGGCTTTAAATAAAAGAAGGG-TATCCAG-CCAGTATCTTCAAA  998

seq1  TACATGCTAAGCAGGATCCAG-AAACAC--AAACAT-GTGCTCAGGTACT  1045
      ||||||||||||| ||||||| ||||||  |||||| |||||||||||| 
seq2  TACATGCTAAGCA-GATCCAGAAAACACCAAAACATGGTGCTCAGGTAC-  1046

seq1  TACAGGATGCTTCAGAGACTCAC-TTCAGTT-CTTCAAGCCTACTGTCCA  1093
      ||||||||||||||||||||||| ||||||| ||||||||   |||||||
seq2  TACAGGATGCTTCAGAGACTCACTTTCAGTTCCTTCAAGCTACCTGTCCA  1096

seq1  TGCTTGTGA-CTCTTTCTGGAAGCTAATGTTGGGTCAAGTTAAAAATCTA  1142
      |||| |||| |||||||| || |||||||  || ||| ||| ||||||||
seq2  TGCTGGTGACCTCTTTCT-GAGGCTAATG-AGGTTCAGGTT-AAAATCTA  1143

seq1  CACTGTTTACAATAAATAGCTCCACAAGAAACCTGT-TCCTACTA  1186
      |||||  ||||||  ||||||||||||||||| ||| ||||||||
seq2  CACTG-GTACAAT--ATAGCTCCACAAGAAACGTGTCTCCTACTA  1185


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