BAC Information

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BAC

Clone NameB6Ng01-288M04
Chromosome3 (Build37)
Map Location 18,562,919 - 18,563,663
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288M04.bB6Ng01-288M04.g
ACCGA086342GA086343
length7451,200
definitionB6Ng01-288M04.b B6Ng01-288M04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaaattaagttgaaataatattcatgcattttccatcattag
gtctcagggtttaaaataaaaaccccatagtatgttgcatccatagattt
taccttgaaaaaaggcactgtgatagcactgttcatgggatatgaatcat
tgcactgagagagtgatgttataaaagaaacaatagctgggcaatggtgg
cacacacctttaatctcagaacttggaaggcagaggcaggcagatctctg
agttctagtacaaccagggctacacagagaaaacctgtctggaaaaaaac
aaaaaagaaaaagaaaagaaacaatggaatcaaaaattatctatgtctgt
gaaaatgggtgacaaatgtatcctgctatgatcttttagggaaagtgtga
tctatctgaactgcagtgtgatttacctaaactacagtggcctgctggca
tgtttcaaacatagcattaacattcgtgcctatatatgaatatgacattt
gtgctacaataaatgctgaagaaaatttatcagtctcctcattttaggaa
ttttgaaatcagaaaatagtttctagtaggtgtgactgagtactctaata
atctcaggattcaggaggctgaggcaggattgcaagaagttcaaggctag
cctaagctatatgagtatttcatagaaagacacattaaatgggggcaggg
agaaagtaaggaaggaaagatggaggagggaaggaggaaggaggg
gaattcagttcagtttcaggttggaccttgtttctgaagtgtatgctgtt
tccattaatggggactgactttccatctctaggggcaactaaggtcaaca
gcagtaggctgtatgttttgagagtcctttggacagatttggtcaacaac
ttagaagaggacatctcatgcctggtattagtgtttttgctacatggcct
ttgagtcttggagagggtacagtcagcccagatgataagtgctcattaac
gctatatatagaatttctcccattctcttttctcagttaacattttcttt
tgctatacataaactctaaagtttcataatctctcattcatcaattattg
accttcttctttgagcaaacatttatcttattagaaagtccttaactatg
cctctatcttgaaatatattccctagttttgcctcaagcagtattaatgt
ttcaggccttatgtttagaatcttgatctttttggagtttattttcttgc
caatgagagataagtatctagtttcactctttttcatggagatacccagt
tttctcagcactattttttcatttgtcttgtcttttttttttagtaacat
attttgcatctttttcaaaaaacagttagttgaaataatagtgagtagtt
ttttaaaattatttttctcaacatgtttattattttgtataggaaagcta
taggcttttataatttagtcctgtatcttgctactttgctgaatatattt
attaagtctacattttctagtggagccttttctaaggtctcatgagtaca
gaaccaagtcatctgcaaataagaaccctgttgactttattttactcttt
tgtaccacattttgtttccttctctggcttttattgttatagctaagact
tcatcagtgaattgagtatgaatagagacatttagtgaaaatgcttccaa
tttgcccactctttagtatttttgctagctattggtctttttgtctataa
cctttattatgtggaagttactttccttaatattctagtttctcaaagac
ttttttacatggagtgacttattgacattttattcaaaagcttgtgaaat
accttgttattctatccttaaactagttccactccttaaatttagttcaa
gtctagtgccaagctaacaatttattggtgagtaatttggcacttgagta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18562919_18563663
seq2: B6Ng01-288M04.b_46_790

seq1  GAATTCTAAAAATTAAGTTGAAATAATATTCATGCATTTTCCATCATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAATTAAGTTGAAATAATATTCATGCATTTTCCATCATTAG  50

seq1  GTCTCAGGGTTTAAAATAAAAACCCCATAGTATGTTGCATCCATAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGTTTAAAATAAAAACCCCATAGTATGTTGCATCCATAGATTT  100

seq1  TACCTTGAAAAAAGGCACTGTGATAGCACTGTTCATGGGATATGAATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGAAAAAAGGCACTGTGATAGCACTGTTCATGGGATATGAATCAT  150

seq1  TGCACTGAGAGAGTGATGTTATAAAAGAAACAATAGCTGGGCAATGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGAGAGAGTGATGTTATAAAAGAAACAATAGCTGGGCAATGGTGG  200

seq1  CACACACCTTTAATCTCAGAACTTGGAAGGCAGAGGCAGGCAGATCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCTTTAATCTCAGAACTTGGAAGGCAGAGGCAGGCAGATCTCTG  250

seq1  AGTTCTAGTACAACCAGGGCTACACAGAGAAAACCTGTCTGGAAAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGTACAACCAGGGCTACACAGAGAAAACCTGTCTGGAAAAAAAC  300

seq1  AAAAAAGAAAAAGAAAAGAAACAATGGAATCAAAAATTATCTATGTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAAGAAAAGAAACAATGGAATCAAAAATTATCTATGTCTGT  350

seq1  GAAAATGGGTGACAAATGTATCCTGCTATGATCTTTTAGGGAAAGTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGGTGACAAATGTATCCTGCTATGATCTTTTAGGGAAAGTGTGA  400

seq1  TCTATCTGAACTGCAGTGTGATTTACCTAAACTACAGTGGCCTGCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGAACTGCAGTGTGATTTACCTAAACTACAGTGGCCTGCTGGCA  450

seq1  TGTTTCAAACATAGCATTAACATTCGTGCCTATATATGAATATGACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAACATAGCATTAACATTCGTGCCTATATATGAATATGACATTT  500

seq1  GTGCTACAATAAATGCTGAAGAAAATTTATCAGTCTCCTCATTTTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACAATAAATGCTGAAGAAAATTTATCAGTCTCCTCATTTTAGGAA  550

seq1  TTTTGAAATCAGAAAATAGTTTCTAGTAGGTGTGACTGAGTACTCTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATCAGAAAATAGTTTCTAGTAGGTGTGACTGAGTACTCTAATA  600

seq1  ATCTCAGGATTCAGGAGGCTGAGGCAGGATTGCAAGAAGTTCAAGGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGATTCAGGAGGCTGAGGCAGGATTGCAAGAAGTTCAAGGCTAG  650

seq1  CCTAAGCTATATGAGTATTTCATAGAAAGACACATTAAATGGGGGCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTATATGAGTATTTCATAGAAAGACACATTAAATGGGGGCAGGG  700

seq1  AGAAAGTAAGGAAGGAAAGATGGAGGAGGGAAGGAGGAAGGAGGG  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAAGGAAGGAAAGATGGAGGAGGGAAGGAGGAAGGAGGG  745