MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-289A18
Chromosome	3 (Build37)
Map Location	55,435,291 - 55,562,567
singlet/doublet	doublet
Overlap gene	none
Upstream gene	B020017C02Rik, D3Ertd300e, Exosc8, Alg5, Smad9, Rfxap, LOC545524, 6030405A18Rik, Ccna1, 4931419H13Rik, Spg20, A730037C10Rik, Sohlh2, Dclk1
Downstream gene	Mab21l1, 4933417G07Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	B020017C02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212507 MGI:3588285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins

name	D3Ertd300e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56790 MGI:1929651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exosc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69639 MGI:1916889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66248 MGI:1913498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55994 MGI:1859993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfxap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170767 MGI:2180854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545524
definition	note : splicing factor, arginine/serine-rich 10-like pseudo : _no_value

name	6030405A18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329641 MGI:3607715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12427 MGI:108042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931419H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70970 MGI:1918220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Spg20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229285 MGI:2139806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A730037C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320604 MGI:2444356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sohlh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74434 MGI:1921684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dclk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mab21l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17116 MGI:1333773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933417G07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins

name	B020017C02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369558 GeneID:212507 MGI:3588285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : RIKEN cDNA B020017C02 gene transcript_id : XM_143238.5

name	D3Ertd300e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367198 GeneID:56790 MGI:1929651
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 3, ERATO Doi 300, expressed transcript_id : NM_019995.2

name	Exosc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254485 GeneID:69639 MGI:1916889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exosome component 8 transcript_id : NM_027148.2

name	Alg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370271 GeneID:66248 MGI:1913498
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase) transcript_id : NM_025442.2

name	Smad9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802048 GeneID:55994 MGI:1859993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 9 (Drosophila) transcript_id : NM_019483.4

name	Rfxap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133930776 GeneID:170767 MGI:2180854
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X-associated protein transcript_id : NM_133231.2

name	6030405A18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353393 GeneID:329641 MGI:3607715
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030405A18 gene transcript_id : NM_177854.3

name	Ccna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802415 GeneID:12427 MGI:108042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin A1 transcript_id : NM_007628.2

name	4931419H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251155 GeneID:70970 MGI:1918220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931419H13 gene transcript_id : XM_001473883.1

name	Spg20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450268 GeneID:229285 MGI:2139806
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) transcript_id : NM_144895.1

name	A730037C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28893224 GeneID:320604 MGI:2444356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A730037C10 gene transcript_id : NM_177203.1

name	Sohlh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802936 GeneID:74434 MGI:1921684
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis and oogenesis specific basic helix-loop-helix 2 transcript_id : NM_028937.2

name	Dclk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130532 GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublecortin-like kinase 1 transcript_id : NM_019978.2

name	Mab21l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560806 GeneID:17116 MGI:1333773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mab-21-like 1 (C. elegans) transcript_id : NM_010750.2

name	B020017C02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38076535 GeneID:212507 MGI:3588285
definition	codon_start : 1 product : similar to REX1, RNA exonuclease 1 homolog (S. cerevisiae) protein_id : XP_143238.2

name	D3Ertd300e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910330 GeneID:56790 MGI:1929651
definition	codon_start : 1 note : p38 interacting protein; transcription factor (p38 interacting protein) product : hypothetical protein LOC56790 protein_id : NP_064379.1

name	Exosc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254486 CCDS:CCDS17352.1 GeneID:69639 MGI:1916889
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CBP-interacting protein 3 protein_id : NP_081424.2

name	Alg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21728372 CCDS:CCDS17353.1 GeneID:66248 MGI:1913498
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004581 - dolichyl-phosphate beta-glucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP] codon_start : 1 note : Alg5 homolog product : dolichyl-phosphatebeta-glucosyltransferase-like protein_id : NP_079718.1

name	Smad9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490384 CCDS:CCDS17354.1 GeneID:55994 MGI:1859993
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030902 - hindbrain development [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : MAD homolog 9 protein_id : NP_062356.3

name	Rfxap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875392 GeneID:170767 MGI:2180854
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] codon_start : 1 exception : alternative start codon note : non-AUG (ACG) translation initiation codon product : regulatory factor X-associated protein protein_id : NP_573494.1 transl_except : (pos:complement(54611595..54611597),aa:Met)

name	6030405A18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244446 CCDS:CCDS17355.1 GeneID:329641 MGI:3607715
definition	codon_start : 1 product : hypothetical protein LOC329641 protein_id : NP_808522.1

name	Ccna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680864 CCDS:CCDS17356.1 GeneID:12427 MGI:108042
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin A1 protein_id : NP_031654.1

name	4931419H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251156 GeneID:70970 MGI:1918220
definition	codon_start : 1 product : hypothetical protein LOC70970 protein_id : XP_001473933.1

name	Spg20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450269 GeneID:229285 MGI:2139806
definition	codon_start : 1 product : spastic paraplegia 20, spartin (Troyer syndrome) homolog protein_id : NP_659144.1

name	A730037C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893225 CCDS:CCDS17357.1 GeneID:320604 MGI:2444356
definition	codon_start : 1 product : hypothetical protein LOC320604 protein_id : NP_796177.1

name	Sohlh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312740 CCDS:CCDS17358.1 GeneID:74434 MGI:1921684
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : spermatogenesis and oogenesis specific basic helix-loop-helix 2 protein_id : NP_083213.1

name	Dclk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910164 CCDS:CCDS17359.1 GeneID:13175 MGI:1330861
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : doublecortin-like kinase; CLICK-I beta; doublecortin and calcium/calmodulin-dependent protein kinase-like 1 product : double cortin and calcium/calmodulin-dependent protein kinase-like 1 protein_id : NP_064362.1

name	Mab21l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754598 CCDS:CCDS17360.1 GeneID:17116 MGI:1333773
definition	GO_process : GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] codon_start : 1 product : mab-21-like 1 protein_id : NP_034880.1

name	4933417G07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369549 GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins product : RIKEN cDNA 4933417G07 gene transcript_id : XR_002339.1

clone name	MSMg01-377F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-289A18.b	B6Ng01-289A18.g
ACC	GA086552	GA086553
length	1,189	1,167
definition	B6Ng01-289A18.b	B6Ng01-289A18.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(55,435,291 - 55,436,465)	(55,561,407 - 55,562,567)
sequence	gaattccactgaagttaattaattagttaattcccactttcactcttggg ctctaggtctctgctcagctctggctagccgcctacactccagccatcct gggctttctgcttaaagacatcccacagaattgggatccccgtcagaaga gccatctaagtttcctttccagatagatgacaattcttccataaaggcaa gaaaacagggtctgtccctttctctccatccctgcagtcagctctgcata gaaaggacctgtcctaaggccagactagcgaaataacctaatccaaattc ccaaagcattggctgatgcctcctttgcctttcaaacggcccctttcatg gctggatcatagggattcactgaaggtttaatttaccagtgtttgggtta gaatgcaggtgactacatcaaagttttcatcatattttttgtcagtgttg gaaaaacattactaatatttgataaaactaagcaacgggagagaacccag agatgacatctgtgttgaatctctgggagaaatcaacaagaaccacagct agaaaatgctcagctgcctagagagaatatgaaagacagggcttctgacc tttagcaccactgataacgagtccgagttctgcacagacggagacacaga caacttcatggtcatggcctgtgaggacagctctgggcgcaggatagtca cctacaaggagagagtagcaggatgtcattggagaccagtcctgaactga tgacatagcattgatgaggacacagccaagccactcactttacctctctg cccgtccttcctgtgtgacatggtctaaccctgtccctactacagggcat ctggggcgagggaagttaatctatgtgagtgctcagagtctggctttcct cttacctaggcaggtacatgggaatcatgtagtcactgcaacattgacac caggccatctccctgcctcttagtttccacttacataatgaacacagggg gacaacaagctctggaacaacagggaaacagtttctgaattgcacaagtt gaaccaaaaatttaacttcaggatcccatgacatgttgcacacatggtgt tcggcagcaacagctcaacctacctggtgggtatggtgctggaacatgtt gttcttagtgtgggttgccttcaggccacatacattagt	gaattcaagcccaaaatctggatgcaaaaactgatgagggaagcccgtgg aggaatgcggcttcctggcttgccagctcgtggttggctcagcctccttt cttacaacagtcaagaccaccatcctgtaggtggcactgcccatagaaag ctggaacctctcgcatcaatcaccagccaagaaaatgccctgcagacttt cataaaggccattactatggaatcattttctggattacgactccttcttc ccacatgaccctagcttgtgtcaaactgacatgagaaggagctagcgcag cagatttggcataggttcatgtctttcagtgccgtcttctgtttgcacac agtggaagcatcgttcagtgctgtgccctgagtctagtatgtagccttta cccctctgcctcttgaagaagccttccttcctgtggaaactcttaattgc tgtcagagtcacatacagatcgttatggtcagcttcttcctccacaagca ggctggctcctagcacccagatcaagggagccagaggcagcagtctggaa ttaccggcacctagttggagatgcatcacttccaaaatgtggtcaacatc aagtcaaagtcaggcaatatagtatcctaaagatccaggaagcatagatg acacttggcttttgataaaaccctctccagggaaaactgaagaaagatac acatcaggggcccacctccctctcagggtgatcctgcccctggcctgttt tacttctcgaatgcacccagaactatttttgcataaatctgaatatcaat aaaattgatactaaaaatatgagattacatttttcaatcctatatattaa atgtttagctctcattatacattaagacaatggtaactacccttgccaat gcagatgtagggtattaaattctccatgaaagttttacccctaacattac agttgaccatgcttggtccaagtaatgcacatcagtttttatgatttttt tttccttgctttgtttcttttgttgtttttcagaacagggattctcttat gtagcccttggctgtccctggacttactctgtaaacagcagacttggaac cagagaatcttacctaccttgtcttctggaatgctaaggattaaaggcag tgttgccacacttgggc
quality values	Open. Hide. 58 26 22 37 58 58 41 16 42 58 47 47 62 62 62 45 47 62 49 49 62 62 62 62 47 62 62 49 62 62 54 62 56 41 32 25 23 32 28 46 28 44 59 62 62 62 62 62 62 62 62 49 49 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 59 46 48 48 43 49 62 62 59 62 62 62 59 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 54 49 47 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 54 58 58 58 58 58 58 58 58 58 47 58 58 58 58 54 54 58 58 58 54 58 54 54 35 49 54 45 35 58 58 53 54 45 58 58 58 54 58 54 46 58 58 58 58 58 58 58 52 54 54 54 31 24 24 54 54 52 52 58 52 54 45 54 58 58 58 54 52 54 54 58 58 58 51 54 51 58 49 58 37 58 58 51 58 58 48 50 52 51 50 58 50 49 58 45 35 45 50 50 51 53 34 58 51 47 58 50 58 54 53 50 51 51 58 50 44 46 51 58 58 42 58 49 58 41 31 30 15 58 41 50 48 50 58 58 52 49 49 58 37 41 53 51 40 18 58 33 32 49 50 52 58 42 39 46 49 50 51 42 50 26 58 41 34 46 25 51 38 50 51 30 53 35 15 58 35 35 52 50 42 39 38 46 50 47 27 13 25 18 51 36 33 39 49 41 45 51 52 40 41 37 54 53 31 50 33 23 43 53 53 38 47 39 53 41 33 38 35 42 51 32 49 47 27 22 42 26 38 33 52 13 54 25 54 37 30 26 31 38 27 32 38 54 34 21 26 54 38 44 51 45 42 45 39 51 47 32 32 29 53 53 37 19 22 22 52 35 53 40 32 34 19 30 31 51 28 31 34 26 26 20 11 46 19 29 42 42 28 33 18 20 29 21 11 21 33 30 36 51 33 20 32 31 31 34 33 51 46 40 30 30 37 28 51 28 32 31 21 13 46 31 41 27 39 25 24 31 34 32 28 37 21 31 32 31 32 31 31 18 46 10 31 31 30 46 42 31 42 42 42 19 17 16 31 37 29 25 20 22 31 19 8 46 23 22 25 30 30 20 26 14 31 11 44 21 31 29 20 27 21 25 43 34 30 30 14 27 24 31 32 36 32 19 22 26 24 39 12 11 12 14 13 17 31 21 21 25 11 15 22 34 32 31 18 33 25 22 21 13 10 19 20 7 21 25 16 21 32 11 38 21 17 25 32 31 12 25 17 14 8 11 17 12 25 17 22 13 24 11 9 39 47 31 17 8 5 6 5 15 6 22 8 13 19 32 34 23 15 9 15 9 19 18 16 8 9 30 7 22 47 15 12 22 21 27 38 19 13 6 8 14 26 10 13 28 11 16 7 5 12 7 6 5 8 8 9 14 11 10 30 23 34 27 7 38 6 17 4 6 10 10 6 16 15 14 27 11 15 27 21 15 9 7 6 5 8 9 8 6 15 26 13 7 6 6 5 7 12 11 2 3 7 13 3 3 3 5 7 9 3 2 1 1 4 7 5 16 12 7 10 7 7 14 2 3 5 6 7 12 7 4 9 26 7 1 2 7 16 16 6 7 17 22 6 5 19 9 3 8 4 14 5 4 6 5 10 9 4 4 2 2 4 8 4 3 2 4 4 3 3 4 17 16 15 10 11 4 6 13 9 7 8 6 10 8 5 6 12 17 7 6 4	Open. Hide. 62 47 44 44 62 47 42 54 62 62 45 43 25 27 27 28 51 45 28 34 49 35 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 54 62 59 59 59 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 37 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 56 62 46 62 62 46 34 46 62 46 34 46 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 44 54 58 58 58 58 58 54 58 58 47 44 58 54 54 54 52 41 52 52 54 58 54 54 51 54 58 58 58 58 58 58 58 52 54 46 35 58 58 58 54 58 54 49 53 58 58 58 58 58 51 47 54 50 45 58 51 58 54 50 53 58 58 51 50 58 58 54 58 58 50 54 41 58 58 48 51 58 52 58 58 58 50 37 39 58 58 54 51 58 52 58 58 50 47 50 58 53 50 54 50 34 58 58 51 52 53 58 58 52 50 54 52 46 58 40 40 54 50 51 39 51 51 51 53 53 54 54 50 58 58 44 40 54 39 51 51 30 37 49 54 51 38 50 39 49 51 41 51 39 53 51 31 49 53 53 37 47 54 52 51 54 54 51 50 41 32 25 54 54 44 38 35 51 53 45 41 32 52 34 34 54 54 46 54 54 51 37 52 40 42 47 31 54 54 40 37 37 22 34 35 37 41 45 53 40 27 5 49 51 37 27 40 40 31 40 47 33 24 51 40 26 33 47 31 31 8 52 49 14 32 33 31 31 51 32 53 29 40 40 40 32 32 47 30 46 23 51 18 47 51 31 31 32 25 51 32 31 34 34 44 31 24 45 31 35 31 51 33 26 36 46 46 29 31 36 29 51 51 51 31 40 31 26 31 30 48 33 31 31 35 31 38 33 43 32 37 31 29 31 31 31 46 46 30 32 42 31 31 23 28 31 31 31 48 46 46 42 31 25 27 30 39 31 41 22 39 30 31 26 39 47 48 47 25 16 21 33 31 31 37 29 31 29 31 31 31 31 32 31 46 34 27 39 28 46 27 31 31 32 41 31 32 33 21 21 24 31 24 28 36 34 33 31 21 25 17 32 23 22 15 19 31 24 5 16 30 23 32 33 20 41 29 18 29 29 22 31 14 25 17 31 30 22 19 38 28 33 21 32 10 48 33 19 21 22 24 19 43 25 17 25 25 12 22 29 29 27 29 16 48 17 17 26 43 43 19 22 14 28 31 30 32 16 18 11 15 19 18 22 30 21 11 18 17 23 33 11 18 20 21 28 28 13 8 13 18 6 10 15 13 20 17 20 14 21 20 29 20 27 27 20 20 19 5 3 3 34 30 29 10 19 11 14 27 9 47 34 28 30 20 30 16 6 3 17 13 11 20 10 15 40 9 20 17 31 8 9 15 30 34 9 10 18 9 18 15 17 8 27 11 18 11 4 9 17 7 4 15 28 3 1 3 8 14 12 14 10 6 8 9 14 11 21 15 17 25 25 5 12 6 12 7 6 7 11 8 18 6 6 9 7 3 4 11 21 13 6 5 4 6 8 16 17 11 8 5 3 5 3 3 7 24 7 9 16 6 7 14 17 8 9 5 6 6 7 13 8 21 5 6 12 13 7 17 5 5 15 3 3 1 4 4 5 4 19 5 10 5 4 17 9 6 6 5 5 7 4 17 4 3 3 6 21 7 7 21 9 8 9 5 4 4 4 3 3 6 12 4 4 4 9 6 4 5 13 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_55435291_55436465
seq2: B6Ng01-289A18.b_44_1232

seq1  GAATTCCACTGAAGTTAATTAATTAGTTAATTCCCACTTTCACTCTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAAGTTAATTAATTAGTTAATTCCCACTTTCACTCTTGGG  50

seq1  CTCTAGGTCTCTGCTCAGCTCTGGCTAGCCGCCTACACTCCAGCCATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGTCTCTGCTCAGCTCTGGCTAGCCGCCTACACTCCAGCCATCCT  100

seq1  GGGCTTTCTGCTTAAAGACATCCCACAGAATTGGGATCCCCGTCAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTCTGCTTAAAGACATCCCACAGAATTGGGATCCCCGTCAGAAGA  150

seq1  GCCATCTAAGTTTCCTTTCCAGATAGATGACAATTCTTCCATAAAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTAAGTTTCCTTTCCAGATAGATGACAATTCTTCCATAAAGGCAA  200

seq1  GAAAACAGGGTCTGTCCCTTTCTCTCCATCCCTGCAGTCAGCTCTGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGGGTCTGTCCCTTTCTCTCCATCCCTGCAGTCAGCTCTGCATA  250

seq1  GAAAGGACCTGTCCTAAGGCCAGACTAGCGAAATAACCTAATCCAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACCTGTCCTAAGGCCAGACTAGCGAAATAACCTAATCCAAATTC  300

seq1  CCAAAGCATTGGCTGATGCCTCCTTTGCCTTTCAAACGGCCCCTTTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCATTGGCTGATGCCTCCTTTGCCTTTCAAACGGCCCCTTTCATG  350

seq1  GCTGGATCATAGGGATTCACTGAAGGTTTAATTTACCAGTGTTTGGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATCATAGGGATTCACTGAAGGTTTAATTTACCAGTGTTTGGGTTA  400

seq1  GAATGCAGGTGACTACATCAAAGTTTTCATCATATTTTTTGTCAGTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAGGTGACTACATCAAAGTTTTCATCATATTTTTTGTCAGTGTTG  450

seq1  GAAAAACATTACTAATATTTGATAAAACTAAGCAACGGGAGAGAACCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACATTACTAATATTTGATAAAACTAAGCAACGGGAGAGAACCCAG  500

seq1  AGATGACATCTGTGTTGAATCTCTGGGAGAAATCAACAAGAACCACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACATCTGTGTTGAATCTCTGGGAGAAATCAACAAGAACCACAGCT  550

seq1  AGAAAATGCTCAGCTGCCTAGAGAGAATATGAAAGACAGGGCTTCTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGCTCAGCTGCCTAGAGAGAATATGAAAGACAGGGCTTCTGACC  600

seq1  TTTAGCACCACTGATAACGAGTCCGAGTTCTGCACAGACGGAGACACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCACCACTGATAACGAGTCCGAGTTCTGCACAGACGGAGACACAGA  650

seq1  CAACTTCATGGTCATGGCCTGTGAGGACAGCTCTGGGCGCAGGATAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATGGTCATGGCCTGTGAGGACAGCTCTGGGCGCAGGATAGTCA  700

seq1  CCTACAAGGAGAGAGTAGCAGGATGTCATTGGAGACCAGTCCTGAACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAGGAGAGAGTAGCAGGATGTCATTGGAGACCAGTCCTGAACTGA  750

seq1  TGACATAGCATTGATGAGGACACAGCCAAGCCACTCACTTTACCTCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGCATTGATGAGGACACAGCCAAGCCACTCACTTTACCTCTCTG  800

seq1  CCCGTCCTTCCTGTGTGACATGGTCTAACCCTGTCCCTACTACAGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTCCTTCCTGTGTGACATGGTCTAACCCTGTCCCTACTACAGGGCAT  850

seq1  CTGGGGCGAGGGAAGTTAATCTATGTGAGTGCTCAGAGTCTGGCTTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCGAGGGAAGTTAATCTATGTGAGTGCTCAGAGTCTGGCTTTCCT  900

seq1  CTTACCTAGGCAGGTACAT-GGAATCATGTAGTCACTGCAACATTGACAC  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTACCTAGGCAGGTACATGGGAATCATGTAGTCACTGCAACATTGACAC  950

seq1  CAGGCCATCTCCCTGCCTC-TAG-TTCCACTTACAT-ATGAACACA-GGG  995
      ||||||||||||||||||| ||| |||||||||||| ||||||||| |||
seq2  CAGGCCATCTCCCTGCCTCTTAGTTTCCACTTACATAATGAACACAGGGG  1000

seq1  GACA--CAGCTCTGG-ACAACA-GGAAACAGTTTCTGAA-TGCAC-AGT-  1038
      ||||   |||||||| |||||| |||||||||||||||| ||||| ||| 
seq2  GACAACAAGCTCTGGAACAACAGGGAAACAGTTTCTGAATTGCACAAGTT  1050

seq1  -GACCAAAAA-TTAAC-TCAGGATCCCATGACA--ATGTGCACATGGTGT  1083
        |||||||| ||||| ||||||||||||||||   ||  ||||||||||
seq2  GAACCAAAAATTTAACTTCAGGATCCCATGACATGTTGCACACATGGTGT  1100

seq1  TTCCGGCAGCCAGCAGCTC-ACCTCACT-GTGGGTATGGTGCTGAAAACA  1131
      |  |||||| || |||||| ||||  || |||||||||||||||  ||||
seq2  T--CGGCAG-CAACAGCTCAACCTACCTGGTGGGTATGGTGCTG-GAACA  1146

seq1  TG-TGTTCTTTTAGTGTGTG-TGCCTTCAAGCCACATAACATTAGT  1175
      || |||||  |||||||| | |||||||| ||||||| ||||||||
seq2  TGTTGTTC--TTAGTGTGGGTTGCCTTCAGGCCACAT-ACATTAGT  1189

seq1: chr3_55561407_55562567
seq2: B6Ng01-289A18.g_66_1232 (reverse)

seq1  GCCCA---GTGGC-ACA-TGCCTTTAATCC-TAGCATT-CAGAAGACAGA  43
      |||||   ||||| ||| |||||||||||| ||||||| ||||||||| |
seq2  GCCCAAGTGTGGCAACACTGCCTTTAATCCTTAGCATTCCAGAAGACA-A  49

seq1  GGTAGGT-AGA-TCTCTGGGTTCAAGTCTGGCCTTGTTTACAGAGTAAGT  91
      ||||||| ||| ||||||| | ||||||||    ||||||||||||||||
seq2  GGTAGGTAAGATTCTCTGGTTCCAAGTCTG---CTGTTTACAGAGTAAGT  96

seq1  TCCAGGACAGCC-AGGGCTACAT-AGAGAAACCCTGTCTTGAAAAACAAC  139
       |  |||||||| |||||||||| |||||| ||||||  |||||||||||
seq2  CCAGGGACAGCCAAGGGCTACATAAGAGAATCCCTGTTCTGAAAAACAAC  146

seq1  AAAAGAAAACAAAGCAAGGAAAAAAAAATCATAAAACCTGATGTGCATTA  189
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAG-AAACAAAGCAAGGAAAAAAAAATCATAAAAACTGATGTGCATTA  195

seq1  CTTGGACCAAGCATGGTCAACTGTAATGTTAGGGGTTAAAACTTCATGGA  239
      |||||||||||||||||||||||||||||||||||| |||  ||||||||
seq2  CTTGGACCAAGCATGGTCAACTGTAATGTTAGGGGTAAAACTTTCATGGA  245

seq1  GAATTTAATACCCTACATCTGCATTGGCAAGGGTAGTTACCATTGTCTTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATACCCTACATCTGCATTGGCAAGGGTAGTTACCATTGTCTTA  295

seq1  ATGTATAATGAGAGCTAAACATTTAATATATAGGATTGAAAAATGTAATC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAATGAGAGCTAAACATTTAATATATAGGATTGAAAAATGTAATC  345

seq1  TCATATTTTTAGTATCAATTTTATTGATATTCAGATTTATGCAAAAATAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTTAGTATCAATTTTATTGATATTCAGATTTATGCAAAAATAG  395

seq1  TTCTGGGTGCATTCGAGAAGTAAAACAGGCCAGGGGCAGGATCACCCTGA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTGCATTCGAGAAGTAAAACAGGCCAGGGGCAGGATCACCCTGA  445

seq1  GAGGGAGGTGGGCCCCTGATGTGTATCTTTCTTCAGTTTTCCCTGGAGAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGTGGGCCCCTGATGTGTATCTTTCTTCAGTTTTCCCTGGAGAG  495

seq1  GGTTTTATCAAAAGCCAAGTGTCATCTATGCTTCCTGGATCTTTAGGATA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATCAAAAGCCAAGTGTCATCTATGCTTCCTGGATCTTTAGGATA  545

seq1  CTATATTGCCTGACTTTGACTTGATGTTGACCACATTTTGGAAGTGATGC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTGCCTGACTTTGACTTGATGTTGACCACATTTTGGAAGTGATGC  595

seq1  ATCTCCAACTAGGTGCCGGTAATTCCAGACTGCTGCCTCTGGCTCCCTTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAACTAGGTGCCGGTAATTCCAGACTGCTGCCTCTGGCTCCCTTG  645

seq1  ATCTGGGTGCTAGGAGCCAGCCTGCTTGTGGAGGAAGAAGCTGACCATAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTGCTAGGAGCCAGCCTGCTTGTGGAGGAAGAAGCTGACCATAA  695

seq1  CGATCTGTATGTGACTCTGACAGCAATTAAGAGTTTCCACAGGAAGGAAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGTATGTGACTCTGACAGCAATTAAGAGTTTCCACAGGAAGGAAG  745

seq1  GCTTCTTCAAGAGGCAGAGGGGTAAAGGCTACATACTAGACTCAGGGCAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCAAGAGGCAGAGGGGTAAAGGCTACATACTAGACTCAGGGCAC  795

seq1  AGCACTGAACGATGCTTCCACTGTGTGCAAACAGAAGACGGCACTGAAAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAACGATGCTTCCACTGTGTGCAAACAGAAGACGGCACTGAAAG  845

seq1  ACATGAACCTATGCCAAATCTGCTGCGCTAGCTCCTTCTCATGTCAGTTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACCTATGCCAAATCTGCTGCGCTAGCTCCTTCTCATGTCAGTTT  895

seq1  GACACAAGCTAGGGTCATGTGGGAAGAAGGAGTCGTAATCCAGAAAATGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGCTAGGGTCATGTGGGAAGAAGGAGTCGTAATCCAGAAAATGA  945

seq1  TTCCATAGTAATGGCCTTTATGAAAGTCTGCAGGGCATTTTCTTGGCTGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGTAATGGCCTTTATGAAAGTCTGCAGGGCATTTTCTTGGCTGG  995

seq1  TGATTGATGCGAGAGGTTCCAGCTTTCTATGGGCAGTGCCACCTACAGGA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATGCGAGAGGTTCCAGCTTTCTATGGGCAGTGCCACCTACAGGA  1045

seq1  TGGTGGTCTTGACTGTTGTAAGAAAGGAGGCTGAGCCAACCACGAGCTGG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCTTGACTGTTGTAAGAAAGGAGGCTGAGCCAACCACGAGCTGG  1095

seq1  CAAGCCAGGAAGCCGCATTCCTCCACGGGCTTCCCTCATCAGTTTTTGCA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGGAAGCCGCATTCCTCCACGGGCTTCCCTCATCAGTTTTTGCA  1145

seq1  TCCAGATTTTGGGCTTGAATTC  1161
      ||||||||||||||||||||||
seq2  TCCAGATTTTGGGCTTGAATTC  1167

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BAC

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Alignment Information