BAC Information

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BAC

Clone NameB6Ng01-289J12
Chromosome3 (Build37)
Map Location 151,271,865 - 151,272,403
singlet/doubletsinglet
Overlap genenone
Upstream geneEltd1
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289J12.bB6Ng01-289J12.g
ACCGA086948GA086949
length1,070533
definitionB6Ng01-289J12.b B6Ng01-289J12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacctcagcaatgacctttatgtgtcattatgtactgcaatagt
aagattccctatactgtgacaaaatgggttaggaaaggaacttgaagaaa
gatttactttggatcatggtccataataatctgtgagcttgtggggcagc
tgaactcatgccaaggagagcattgtggaacagaactgcttgtatcatgg
tgcctgaggagagctggggacaagataaagtcttccaaggtccattacca
gtggcctgcttccgccatctacatactactttctaacagcatgttcagta
aagaactcatctatgggttcatgtattgataaaataagtacatttatgat
ttttataacattcaaagtgctctactgccacagaccgggcccagtcagcc
tcactcattccttgtggaatcagggtttcagacagatgggcaaagagtcg
acaagaattgacaaacacaagggagtgctgagtctgaatgtattttgtcc
aagcaaacaccagacttttaatacagaagaaaaataagaaggctaggcaa
gtacactggttctaaggtacactggttcttaacacaaaacaaagaaaatg
catacataaaaagatggcaggagccaggccctgtttttcaactgagatca
gctaaacacaggagccaggtaaatgctctgatgcaaatgctagtttattg
ttaagctcaccaccaggggtttgttagtaaatacctgattatgctattcc
tctgggcctagtgaaaaaacctgcaccagggaaattccattctactaacc
ctttcatgaataatactacaacccaccagtggggacatcttctggatata
tgcccaggagaggtattgcgggatcctccggtagtactatgtccaatttt
cctgaggaccgccagactgatttccagagtggttgtacaagcttgcaatc
ccaccacattggaagagtgttcctctttctcccacatccttggcaagcat
ctgctgtcactgatttttttgaatctagccattctgactgtgtgagaatg
gaatcccaaggttggtttga
ctgacaatattttccatattcctttttcagctaacactcgccaaaatata
gagggtgggaaaccatgggaaaggttgaactcaagaataatgacaaatta
agaaattcacctattatgagaatggttactaaaaaacggcagagttaatc
tcagtaagcctttctctgaaatccgtatgaattgtacctgttgtcagggt
atctttggggagaaaggaggaatggtttcactggcagtcatccatcgcat
gctgaacaatcgcacttcagttgtgctccttgccctgttataaccgatgc
aatgcacaatgggacctccaatttttgaaggatgaacttgataattgaga
atgtatttatgagatcaagtattatatacagattcctaagaatggtatga
acattttctagtaaggtgtggagcacttgaaaacatagagaaagttgtga
ttgccatgactgtatcttttatgctcattaatctctaaaatcccccctct
ctctccctcctaggtcccgtgcatatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151271865_151272403
seq2: B6Ng01-289J12.g_68_606

seq1  GAATTCCTGACAATATTTTCCATATTCCTTTTTCAGCTAACACTCGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACAATATTTTCCATATTCCTTTTTCAGCTAACACTCGCCAA  50

seq1  AATATAGAGGGTGGGAAACCATGGGAAAGGTTGAACTCAAGAATAATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAGGGTGGGAAACCATGGGAAAGGTTGAACTCAAGAATAATGAC  100

seq1  AAATTAAGAAATTCACCTATTATGAGAATGGTTACTAAAAAACGGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGAAATTCACCTATTATGAGAATGGTTACTAAAAAACGGCAGAG  150

seq1  TTAATCTCAGTAAGCCTTTCTCTGAAATCCGTATGAATTGTACCTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCAGTAAGCCTTTCTCTGAAATCCGTATGAATTGTACCTGTTGT  200

seq1  CAGGGTATCTTTGGGGAGAAAGGAGGAATGGTTTCACTGGCAGTCATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTATCTTTGGGGAGAAAGGAGGAATGGTTTCACTGGCAGTCATCCA  250

seq1  TCGCATGCTGAACAATCGCACTTCAGTTGTGCTCCTTGCCCTGTTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATGCTGAACAATCGCACTTCAGTTGTGCTCCTTGCCCTGTTATAAC  300

seq1  CGATGCAATGCACAATGGGACCTCCAATTTTTGAAGGATGAACTTGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCAATGCACAATGGGACCTCCAATTTTTGAAGGATGAACTTGATAA  350

seq1  TTGAGAATGTATTTATGAGATCAAGTATTATATACAGATTCCTAAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATGTATTTATGAGATCAAGTATTATATACAGATTCCTAAGAATG  400

seq1  GTATGAACATTTTCTAGTAAGGTGTGGAGCACTTGAAAACATAGAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACATTTTCTAGTAAGGTGTGGAGCACTTGAAAACATAGAGAAAG  450

seq1  TTGTGATTGCCATGACTGTATCTTTTATGCTCATTAATCTCTAAAATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTGCCATGACTGTATCTTTTATGCTCATTAATCTCTAAAATCCC  500

seq1  CCCTCTCTCTCCCTCCTAGGTCCCGTGCATATGTGTGTG  539
      |||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCTCCCTCCTAGGTCCCGTGCATATGTGTGTG  539