MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-290N07
Chromosome	3 (Build37)
Map Location	23,081,350 - 23,082,503
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tbl1xr1, LOC675593, LOC100040378, LOC623751
Downstream gene	LOC100039548, EG635702
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tbl1xr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC623751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG635702 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635702 MGI:3643277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Tbl1xr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130978338 GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin (beta)-like 1X-linked receptor 1 transcript_id : NM_030732.3

name	LOC100040378 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250846 GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040378 transcript_id : XM_001474577.1

name	LOC100039548 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250817 GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039548 transcript_id : XM_001473102.1

name	EG635702 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250819 GeneID:635702 MGI:3643277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG635702 transcript_id : XM_975226.2

name	Tbl1xr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543001 CCDS:CCDS17266.1 GeneID:81004 MGI:2441730
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear receptor corepressor/HDAC3 complex subunit TBLR1; F-box-like/WD repeat protein TBL1XR1; TBL1-related protein 1 product : IRA1 protein protein_id : NP_109657.2

name	LOC100040378 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250847 GeneID:100040378
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474627.1

name	LOC100039548 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250818 GeneID:100039548
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473152.1

name	EG635702 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250820 GeneID:635702 MGI:3643277
definition	codon_start : 1 product : similar to N-acetylated alpha-linked acidic dipeptidase 2 protein_id : XP_980320.2

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 1 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 2 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 3 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 4 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 5 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 6 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 7 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 8 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 9 pseudo : _no_value

name	LOC675593 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250816 GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031023.1

clone name	MSMg01-076E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-165D09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-290N07.b	B6Ng01-290N07.g
ACC	GA087873	GA087874
length	1,190	1,167
definition	B6Ng01-290N07.b	B6Ng01-290N07.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccctcagctagggaacctacattggactctacgtgtgagacagat ttttgtaggcgttggatgtctcgatctatgtctagttttaggcttttata attcttctcttgcaatgttagggctgctattccagtgtgtgccccagcta gccctgcccgcagaattacaggcaaagttagggaaataggttctctcttc tgcttcatgagtcccttccccccactccccaaaaaatgtcctattaggtt cttctgaaactacttcttttgaataataggttatgcgtggcattaagtgg actagaatacagaactcttttgtagtaggagaattaaggacctctctgca cacatggagtcaactctgttgaacaggctcaccatgcctgttcaggggga gtaagccatttggaatggactgtgagagttgtttgattgcaaaggtgctg atgcgatgagggaactttccccaggcaggggccctgtcctgatatagtct gcagggctaatactgggccttcctgggaccatctgcatttagtgtccttc tcagactcattatatttaaataaaattccaacaccttcataaaaaagggg tctggctttatagcacaaccagcaggaagtggtcaactctgggtgggagc ctttcagaatctggaatgtttttaacatgattgaccaaagaggatctacc agctctgtgcagttcagaaaagatcttgctgatggggacccctgctggtt tggggaaactaggggaacagcagttgccagtctgaggaccagctttggtg cagcttttttttctgggcaggacctcttgatataggtttagagttttcca gaatccggtttggccctactgcttctggctgcgaggttcacaattggttt taccgaaagtctaatggtgaaaaggaggctggaactaattcctctgatga cgtggagtcgaaggctccaagaccttcccagcttctcagctcttttgcct gattcccttttgtctgtggaccttagtaggactttcagagtcgagccttc ttcctaacatcacccgtgtttatctcgttaccgatttctcacaagcctcc agaagcacagttacttgttcttgaccctgattgttaacagtcctttctcc ttccaggaaccatatttatagaaaagttttctctctccag	gaattcaatagtgataaaaactgcatgatattcatacagagagaggcagg tagatcagaattggagaccaagaaatgaacccacacacaactatggtcac ttgatctttgacaaaggagctaaaaccatccagtggaaaaaagacagcat tttcaacatatgctggttcaactggtggttatcgtgtagaagaatacaaa tctctccattcttatctgcttatacaaagctcaagtccaagtcgatcaag aacctccaagtaaaaccagatagactgcaactaatagaagagagaatagg aaaaacctagagcacatgggcaaaggggaaattttcctgaacaaaatacg aatagcttatgctcaaaagatcaaaaattgaaaaatgttacctcataaaa ttgcaaatcttctgcaaggcaaaggacactatcaataggacaaaaacagc aaccaacagattggggaaagatctttaccaattctctatccaacagaggg ctaatatacattattcaaagaactcaagaagttagacttcagagaaccaa ataaccctattaaaaatgggttacatatcttaacaaagaattctcaactg aggaatactaaatggctgagaagcacctaaaaaatgttcaacatccttgg tcatcagggaaatgcaaatcaaaacaatcctgagattccacctcacacaa gtcagattggctaagatcaacaactcaggtgacagcagatgctggtgaag atgtggagaaagagggacactcctccattgttggtgagattgaaagctga tacaaccattctggaaatcagtcttgtgtttcttcagaaatttggacata gtactacctgaggagccaggtatacctctcctgggcatatacccaaaaga tactcgaacatataacaagggacatgtgctctgctatgttcagaggagcc ttatttatatagcccagaagcccataaagaaccaagatgtactttgacag gaggaagaaaatgtggtaccatttacaaaatgaagtactattcgctatta aaaacatgacttcatgaattcttaggcaattgatgcacctaggaatatca ttcctggagtgagtagcttattccccccgaaacacaccattgtgaccatt acccacattacctacgt
quality values	Open. Hide. 58 33 27 32 58 58 58 49 49 41 41 62 62 47 42 62 62 62 47 47 41 62 62 62 62 54 62 62 62 50 44 44 56 56 35 45 38 28 44 59 62 62 59 59 59 43 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 49 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 58 58 58 54 58 58 58 58 58 58 58 58 58 47 58 58 58 58 48 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 42 37 58 52 58 58 58 58 58 54 58 58 54 54 54 58 58 54 54 52 52 58 54 58 54 51 40 58 50 58 58 53 51 58 58 53 53 58 58 43 48 58 58 51 51 58 58 49 49 54 58 51 42 58 58 50 54 58 54 58 51 50 52 58 58 58 58 54 54 40 58 58 58 50 53 58 58 58 50 58 58 58 52 52 52 52 51 50 51 54 50 58 49 46 54 58 51 28 58 58 51 50 52 49 58 50 53 52 49 46 58 53 42 51 58 50 39 54 58 58 58 32 53 51 51 58 47 53 53 33 58 50 50 53 53 54 40 41 47 33 54 27 54 54 54 35 25 49 42 40 54 54 53 42 49 50 39 31 53 42 54 49 39 47 30 54 31 25 53 53 39 38 41 40 40 47 46 53 53 54 53 52 53 52 32 52 53 37 44 25 54 54 54 53 38 42 37 43 53 52 46 37 47 44 46 37 37 54 44 47 33 19 32 40 46 33 34 53 45 41 51 40 53 32 41 46 40 40 44 47 34 32 45 31 15 52 46 40 47 32 31 40 35 52 36 33 53 31 43 29 45 34 31 31 32 31 31 33 10 42 30 27 31 30 24 32 45 51 33 36 33 31 31 30 30 32 43 42 51 51 51 51 51 51 31 31 31 41 46 41 31 43 32 32 27 9 25 31 42 42 27 32 30 28 31 35 34 28 38 21 47 27 31 28 31 17 26 47 47 22 28 32 31 30 34 25 25 26 39 23 28 14 48 29 38 22 16 33 37 31 24 31 27 37 30 35 31 28 27 31 39 30 36 27 30 13 41 19 34 25 34 32 25 14 25 17 31 31 32 44 31 48 48 37 25 31 34 29 38 44 35 29 32 31 22 19 21 21 38 33 31 32 38 48 43 15 21 13 22 24 19 24 32 21 36 26 22 32 28 24 11 24 29 24 37 34 32 22 31 34 15 10 12 13 17 18 19 26 8 7 5 8 11 22 26 11 16 21 32 17 18 12 18 14 27 9 23 11 13 32 37 32 23 17 33 31 23 14 14 14 26 16 28 15 11 9 34 38 21 12 18 23 19 22 28 13 23 16 40 18 17 34 28 7 8 10 19 20 11 5 14 13 11 6 10 8 17 8 5 13 18 15 8 21 12 9 29 13 27 20 7 21 7 20 14 5 9 5 21 18 9 11 7 3 14 13 3 3 3 5 13 8 16 16 10 17 27 20 13 7 2 3 5 9 5 12 8 5 2 2 1 6 18 6 13 11 13 11 22 16 21 17 10 7 10 8 16 19 14 5 8 5 24 13 3 1 3 8 21 4 5 6 14 7 5 3 3 2 3 6 5 13 4 3 6 14 5 2 8 17 5 6 6 2 1 4 8 8 15 6 12 20 4 3 4 4 4 13 6 7 4 4 4 7 4 5 21 6 16 17 3 5 4 11 5 11 4 4 13 6 4 7 3 1 6 17 11 6 5 2 2 13 18 7 7 7 10 6 5 8 4 5 4	Open. Hide. 62 47 39 47 62 47 51 54 62 62 62 62 62 44 59 59 62 49 62 62 62 62 62 59 62 62 62 59 62 62 59 62 59 59 62 62 62 59 62 59 59 59 59 59 62 62 62 62 62 62 62 62 59 54 62 62 59 59 62 62 62 62 62 62 59 59 59 59 62 62 62 59 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 54 62 62 62 62 62 49 54 62 62 62 62 54 54 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 46 46 58 58 58 58 49 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 45 46 58 58 54 54 49 54 58 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 54 58 58 54 58 58 58 58 52 58 58 54 58 58 49 58 58 58 53 49 51 49 58 54 46 58 49 58 58 58 53 58 58 58 47 58 58 58 58 49 58 58 58 49 51 58 58 45 51 51 50 51 51 58 52 58 58 58 54 58 58 51 37 58 58 42 58 49 38 58 52 58 53 41 51 58 58 58 39 41 58 58 43 53 53 54 58 50 58 54 54 58 58 50 58 58 44 21 58 58 37 58 42 41 58 51 42 58 58 58 58 41 53 58 41 58 49 50 58 51 40 54 58 49 51 49 51 54 41 53 45 47 51 49 20 38 38 49 54 37 41 53 42 40 54 50 50 53 42 49 54 44 44 49 49 49 52 54 44 54 44 17 32 32 39 41 42 30 49 54 54 53 51 46 44 49 52 53 42 51 52 52 31 46 31 51 54 30 33 30 26 53 31 42 37 45 53 52 52 25 40 42 53 43 31 6 49 40 53 32 22 34 45 53 32 34 39 29 52 53 33 47 49 33 47 53 53 31 33 30 52 45 42 33 31 24 26 49 36 42 51 32 47 46 31 31 36 42 42 31 51 35 30 28 24 44 31 41 21 28 45 46 30 31 41 31 33 20 43 41 31 51 45 31 30 45 31 31 31 29 42 29 15 18 33 24 40 31 30 31 41 25 29 47 19 27 32 36 38 31 31 25 17 38 27 46 31 46 34 31 30 32 31 20 23 44 48 31 27 48 41 31 31 32 25 32 31 35 31 33 33 36 42 32 37 28 29 31 37 23 37 31 25 42 31 27 31 44 36 27 31 35 31 31 32 31 31 24 33 25 36 43 36 26 18 31 24 31 23 33 28 12 14 41 36 28 14 38 24 31 32 31 31 22 25 25 21 21 31 30 30 24 10 11 7 24 8 43 8 24 18 21 31 16 14 20 32 30 32 21 21 23 33 23 21 26 17 25 29 31 25 33 18 27 26 14 29 18 19 17 19 32 48 32 31 20 23 8 19 23 19 39 9 19 27 20 31 12 10 30 10 22 28 20 40 18 13 14 14 3 7 8 14 16 23 14 21 16 18 22 20 47 19 21 15 16 7 6 7 11 8 6 22 9 10 17 19 13 15 18 28 24 28 20 4 8 10 18 11 8 34 6 8 10 7 21 21 10 15 18 3 7 6 11 18 21 18 7 8 18 18 11 17 21 20 16 24 15 28 28 25 12 8 5 3 12 18 10 16 8 12 11 10 7 17 9 2 6 14 14 12 7 6 12 10 14 14 4 5 10 2 5 3 1 3 1 5 21 10 11 7 8 3 2 4 18 21 16 6 5 9 13 6 12 9 6 2 3 4 8 10 2 3 1 3 5 5 17 4 4 6 7 17 28 22 9 2 7 11 3 2 5 13 9 5 4 1 3 5 9 4 5 13 9 10 3 18 9 4 3 3 6 4 15 4 25 18 4 6 3 1 3 1 1 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_23081350_23082503
seq2: B6Ng01-290N07.b_46_1235 (reverse)

seq1  ----------------------------------CTGGAGAGA-AAAGGA  15
                                        |||||  || ||||||
seq2  CTGGAGAGAGAAAACTTTTCTATAAATATGGTTCCTGGAAGGAGAAAGGA  50

seq1  CTGTTACATATCAGGGTCCAGAACAATTTTACTGTGCTTCCTGGAG--CT  63
      ||||||   ||||||||| |||||||  | ||||||||| ||||||   |
seq2  CTGTTAACAATCAGGGTCAAGAACAA-GTAACTGTGCTT-CTGGAGGCTT  98

seq1  GTGAGAAATCGGTTACAGAGATAAAAACACGGGTGATGTTAAGGGAAG-A  112
      ||||||||||||| || |||||  |||||||||||||||||  ||||| |
seq2  GTGAGAAATCGGTAAC-GAGAT--AAACACGGGTGATGTTA--GGAAGAA  143

seq1  GGCTCGACTCTG-AAGTCCTACTAAGGTCCACAGAC-AAAGGGAATCAGG  160
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  GGCTCGACTCTGAAAGTCCTACTAAGGTCCACAGACAAAAGGGAATCAGG  193

seq1  C-AAAGAGCTGAGAAGCTGGG-AGGTCTTGGAGCCTTCGGCTCCACGTCA  208
      | ||||||||||||||||||| ||||||||||||||||| ||||||||||
seq2  CAAAAGAGCTGAGAAGCTGGGAAGGTCTTGGAGCCTTCGACTCCACGTCA  243

seq1  TCAGAGGAATTAGTTCCAGCCTCCTTTTCACCATTAGACTTTCGGTAAAA  258
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGAATTAGTTCCAGCCTCCTTTTCACCATTAGACTTTCGGTAAAA  293

seq1  CCAATTGTGAACCTCGCAGCCAGAAGCAGTAGGGCCAAACCGGATTCTGG  308
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGTGAACCTCGCAGCCAGAAGCAGTAGGGCCAAACCGGATTCTGG  343

seq1  AAAACTCTAAACCTATATCAAGAGGTCCTGCCCAG-AAAAAAAGCTGCAC  357
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAACTCTAAACCTATATCAAGAGGTCCTGCCCAGAAAAAAAAGCTGCAC  393

seq1  CAAAGCTGGTCCTCAGACTGGCAACTGCTGTTCCCCTAGTTTCCCCAAAC  407
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTGGTCCTCAGACTGGCAACTGCTGTTCCCCTAGTTTCCCCAAAC  443

seq1  CAGCAGGGGTCCCCATCAGCAAGATCTTTTCTGAACTGCACAGAGCTGGT  457
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGGTCCCCATCAGCAAGATCTTTTCTGAACTGCACAGAGCTGGT  493

seq1  AGATCCTCTTTGGTCAATCATGTTAAAAACATTCCAGATTCTGAAAGGCT  507
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTCTTTGGTCAATCATGTTAAAAACATTCCAGATTCTGAAAGGCT  543

seq1  CCCACCCAGAGTTGACCACTTCCTGCTGGTTGTGCTATAAAGCCAGACCC  557
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCAGAGTTGACCACTTCCTGCTGGTTGTGCTATAAAGCCAGACCC  593

seq1  CTTTTTTATGAAGGTGTTGGAATTTTATTTAAATATAATGAGTCTGAGAA  607
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATGAAGGTGTTGGAATTTTATTTAAATATAATGAGTCTGAGAA  643

seq1  GGACACTAAATGCAGATGGTCCCAGGAAGGCCCAGTATTAGCCCTGCAGA  657
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTAAATGCAGATGGTCCCAGGAAGGCCCAGTATTAGCCCTGCAGA  693

seq1  CTATATCAGGACAGGGCCCCTGCCTGGGGAAAGTTCCCTCATCGCATCAG  707
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAGGACAGGGCCCCTGCCTGGGGAAAGTTCCCTCATCGCATCAG  743

seq1  CACCTTTGCAATCAAACAACTCTCACAGTCCATTCCAAATGGCTTACTCC  757
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGCAATCAAACAACTCTCACAGTCCATTCCAAATGGCTTACTCC  793

seq1  CCCTGAACAGGCATGGTGAGCCTGTTCAACAGAGTTGACTCCATGTGTGC  807
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAACAGGCATGGTGAGCCTGTTCAACAGAGTTGACTCCATGTGTGC  843

seq1  AGAGAGGTCCTTAATTCTCCTACTACAAAAGAGTTCTGTATTCTAGTCCA  857
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTCCTTAATTCTCCTACTACAAAAGAGTTCTGTATTCTAGTCCA  893

seq1  CTTAATGCCACGCATAACCTATTATTCAAAAGAAGTAGTTTCAGAAGAAC  907
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGCCACGCATAACCTATTATTCAAAAGAAGTAGTTTCAGAAGAAC  943

seq1  CTAATAGGACATTTTTTGGGGAGTGGGGGGAAGGGACTCATGAAGCAGAA  957
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGGACATTTTTTGGGGAGTGGGGGGAAGGGACTCATGAAGCAGAA  993

seq1  GAGAGAACCTATTTCCCTAACTTTGCCTGTAATTCTGCGGGCAGGGCTAG  1007
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACCTATTTCCCTAACTTTGCCTGTAATTCTGCGGGCAGGGCTAG  1043

seq1  CTGGGGCACACACTGGAATAGCAGCCCTAACATTGCAAGAGAAGAATTAT  1057
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCACACACTGGAATAGCAGCCCTAACATTGCAAGAGAAGAATTAT  1093

seq1  AAAAGCCTAAAACTAGACATAGATCGAGACATCCAACGCCTACAAAAATC  1107
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTAAAACTAGACATAGATCGAGACATCCAACGCCTACAAAAATC  1143

seq1  TGTCTCACACGTAGAGTCCAATGTAGGTTCCCTAGCTGAGGGAATTC  1154
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACACGTAGAGTCCAATGTAGGTTCCCTAGCTGAGGGAATTC  1190

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information