BAC Information

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BAC

Clone NameB6Ng01-291O23
Chromosome3 (Build37)
Map Location 105,517,588 - 105,637,439
singlet/doubletdoublet
Overlap gene6530418L21Rik, Rap1a, EG433637
Upstream geneEG624251, 7530404M11Rik, Ppm1j, Rhoc, Mov10, Capza1, St7l, LOC100043572, Wnt2b, Cttnbp2nl, 4930564D02Rik, 1700095B22Rik, Kcnd3, Ddx20
Downstream geneAdora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291O23.bB6Ng01-291O23.g
ACCGA088698GA088699
length97156
definitionB6Ng01-291O23.b B6Ng01-291O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,636,901 - 105,637,439)(105,517,588 - 105,517,643)
sequence
gaattctgaaaagcacctctctactatgttatttaagattttatttgtgt
tttaaaattatgtgtgtgtgtgtttctgtggtggtttgaatggaaatggc
ctctatagaatcacagggagtggcactattagaaggtgtggccttgttgg
agtaggtaggtgttagaggaaatgcatcactgggggtaggccctgtggtc
tcagatgctgaaggcaggcccgtggctcccagtcccttcctactgtctac
agatctagatgtagaactctcagcttcttctccagcaccatgtgtgcctg
catgctgctatgcttcccaccatgatgataatggactaaacctctgaacc
gtaagtcagcaccaattaaatactttcctttataggaattgtcatggcca
tggtgtctcttcacaacaatgaaaccttgattaagacaatgtgtatgtgt
atatgtgcagtgcccactaggccagaagaatcttataaacactctagagc
tggatttacaggcagttagaagccattgaacatgagaaccaaactcattt
cttctggaagagcagcaatcactcttcattgctgagccatttctccggct
gtcctctgccccacttttaagcagagtcttaaggctggtctgaagcttgc
tacgtagaccaggctgacctgaaactcacaaagatccacctccctctatc
ttctgagtgctggaatcaaaggtgtgtgcctccacacctggctctccagg
tctcaatctatagccagacttggcctggaattcatgttggtcctccttaa
tcagtctcctgagtgctgggattgtagatacctgaagagagatttctttt
tcaatgggaaattgccatccatccttaagtcaccaggtcagcctggagcc
tctctgctcccatctggtttagttttacttctctctccctctgtgtcttt
aacagactgaaactccaaggt
tagagccaagcatgagggaacaggtgcttgggtgggggtgtggggcgctg
gcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_105636901_105637439
seq2: B6Ng01-291O23.b_48_586 (reverse)

seq1  GTTCTCATGTTCAATGGCTTCTAACTGCCTGTAAATCCAGCTCTAGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATGTTCAATGGCTTCTAACTGCCTGTAAATCCAGCTCTAGAGTG  50

seq1  TTTATAAGATTCTTCTGGCCTAGTGGGCACTGCACATATACACATACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGATTCTTCTGGCCTAGTGGGCACTGCACATATACACATACACA  100

seq1  TTGTCTTAATCAAGGTTTCATTGTTGTGAAGAGACACCATGGCCATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAATCAAGGTTTCATTGTTGTGAAGAGACACCATGGCCATGACA  150

seq1  ATTCCTATAAAGGAAAGTATTTAATTGGTGCTGACTTACGGTTCAGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATAAAGGAAAGTATTTAATTGGTGCTGACTTACGGTTCAGAGGT  200

seq1  TTAGTCCATTATCATCATGGTGGGAAGCATAGCAGCATGCAGGCACACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCATTATCATCATGGTGGGAAGCATAGCAGCATGCAGGCACACAT  250

seq1  GGTGCTGGAGAAGAAGCTGAGAGTTCTACATCTAGATCTGTAGACAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGAGAAGAAGCTGAGAGTTCTACATCTAGATCTGTAGACAGTAG  300

seq1  GAAGGGACTGGGAGCCACGGGCCTGCCTTCAGCATCTGAGACCACAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACTGGGAGCCACGGGCCTGCCTTCAGCATCTGAGACCACAGGGC  350

seq1  CTACCCCCAGTGATGCATTTCCTCTAACACCTACCTACTCCAACAAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCCAGTGATGCATTTCCTCTAACACCTACCTACTCCAACAAGGCC  400

seq1  ACACCTTCTAATAGTGCCACTCCCTGTGATTCTATAGAGGCCATTTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTCTAATAGTGCCACTCCCTGTGATTCTATAGAGGCCATTTCCAT  450

seq1  TCAAACCACCACAGAAACACACACACACATAATTTTAAAACACAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCACCACAGAAACACACACACACATAATTTTAAAACACAAATAAA  500

seq1  ATCTTAAATAACATAGTAGAGAGGTGCTTTTCAGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAATAACATAGTAGAGAGGTGCTTTTCAGAATTC  539

seq1: chr3_105517588_105517643
seq2: B6Ng01-291O23.g_75_130

seq1  TAGAGCCAAGCATGAGGGAACAGGTGCTTGGGTGGGGGTGTGGGGCGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCAAGCATGAGGGAACAGGTGCTTGGGTGGGGGTGTGGGGCGCTG  50

seq1  GGCTGG  56
      | ||||
seq2  GCCTGG  56