BAC Information

Click to search

BAC

Clone NameB6Ng01-292B22
Chromosome3 (Build37)
Map Location 14,097,506 - 14,098,585
singlet/doubletsinglet
Overlap gene0710005M24Rik
Upstream geneLOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292B22.bB6Ng01-292B22.g
ACCGA088838GA088839
length1,0911,158
definitionB6Ng01-292B22.b B6Ng01-292B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaactgtcttctagttggctgtcaagtttctgccttttcaga
gtttatcagcagtgaagtggctttataaatagtcaaatgcaatatctact
tctacagaagtacacacaagaagctataaattgagacctgcatattaatt
gtgaattcaagtgaaacaaagacatgtgtaatactttattgcattttgac
atgagccttactagaatatttccgtgaaaacatgagcactaagaaagtta
cataaactagattaagttcaatgaagaaagacaaaaacaactaatggaat
tgaaggaatgacatgtgatgggaaatagaaatgaatctattgattaactc
tggtacaagaaaaaacacgaaaagagctgacctgactgggtcagatataa
atacagaaagactagaacctcagcatagcacctttactgacatttcatct
cacttaattttataaatgaggaaaatgtgaagcttgagttacacccttaa
aaatgggtacattatggtgtgcggtagagaggttgaggatgtaggggcag
ggagcccagggtaacttctggggttgtcccggtggtcccaggagagatgg
agttcgtgacggagcagccgttcgacctggacccatgctacatgcagctg
cactacattggcgagggagcagaaggcatgatctgctcagctcatgacca
tgtgcacaagaccagaatggctatcaagaagatcagccgcttcctgtatc
aaatctactgtcagaacacgctgaggctgagggaaatccagaacttgctg
agattcccaccatgagaatgtcataggcatgcgagacattctcagagcac
ccaccctggaaggcatgaggcaagaaagtttacattggtcaggacctcat
ggagacagacttgtacaagctgtttaagaaccaccagttgagcaatgacc
accatctgctattttcctctacagatccctaagggcctccaggtacatac
acctccaacaccagacccgaaccctccatctgctagccaaccacacccac
cctgagacctgtaagatcctgttgatttttaagccatgacc
gaattcctgatttttctaagacctttatcatgaaagggtgttggattctg
tcaaatgctttctcagcatctaacaagaggatcacatggtttttgtgttt
gaatttatttatttactggattacattgatggaattccagataaaccatc
cctgtatccctgggatgaagccaacttgatcatgatggataattattttg
atatgttttgtgattcggtgtgcgaggattttattgagtatttttgcatc
gatactcataagggaaattggtctgacgttctcttcctttgttgggtctt
tgtgtggattaggttcagagttgctatggcttcatagaatgaattgggta
gactaccttctgtttctatttattggaatactttgagaaaaattggaatt
agaacttcttttaaggtctgatagaactctgctttaaacccttctggtcc
tgggctttttgtttgtttgtttgtttgttttggagaccagtaattactgc
ttttgtttctttagctgaaatagaactgtttagatcattaatctgatact
gatttaactttggtacttggtatttgtctaataaattgtccattttcatt
ctggttttccagttttgttgagtttagcatttgtagtagaacctgatcat
gttttggattttctcaggttgtgttttatgtctcccttttcttttctaat
ttttaaaattaggatactgtccctgtggccctagttagtctggctaaggg
ttaatctatcctgttgattttctcaaagagccagctcctgttttggctga
ttctttgaatagttctttttgtttctgcttggttgatttcagccctgagt
tgggattatttcctgtagtctactcctcttgtgtgattttgcttcctttt
gttctagagtttataggtgtgctgttaggctgctagtgtatgctctctct
agtttctttttagtgttactcagagctattgtgttttcctcttagactgc
tttcattgtgtcccatagttttgggtatggtgtggtttcattcaataaac
tctaaaagtctttattctgcttttgtaaggcatagttcccttcatgtgtt
tgactttccatattatccttgaggctaatttgtgaaagagtatctggttg
tgatctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14097506_14098585
seq2: B6Ng01-292B22.b_44_1134

seq1  GAATTCAAAAACTGTCTTCTAGTTGGCTGTCAAGTTTCTGCCTTTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAACTGTCTTCTAGTTGGCTGTCAAGTTTCTGCCTTTTCAGA  50

seq1  GTTTATCAGCAGTGAAGTGGCTTTATAAATAGTCAAATGCAATATCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCAGCAGTGAAGTGGCTTTATAAATAGTCAAATGCAATATCTACT  100

seq1  TCTACAGAAGTACACACAAGAAGCTATAAATTGAGACCTGCATATTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAAGTACACACAAGAAGCTATAAATTGAGACCTGCATATTAATT  150

seq1  GTGAATTCAAGTGAAACAAAGACATGTGTAATACTTTATTGCATTTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCAAGTGAAACAAAGACATGTGTAATACTTTATTGCATTTTGAC  200

seq1  ATGAGCCTTACTAGAATATTTCCGTGAAAACATGAGCACTAAGAAAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTTACTAGAATATTTCCGTGAAAACATGAGCACTAAGAAAGTTA  250

seq1  CATAAACTAGATTAAGTTCAATGAAGAAAGACAAAAACAACTAATGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACTAGATTAAGTTCAATGAAGAAAGACAAAAACAACTAATGGAAT  300

seq1  TGAAGGAATGACATGTGATGGGAAATAGAAATGAATCTATTGATTAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAATGACATGTGATGGGAAATAGAAATGAATCTATTGATTAACTC  350

seq1  TGGTACAAGAAAAAACACGAAAAGAGCTGACCTGACTGGGTCAGATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAAGAAAAAACACGAAAAGAGCTGACCTGACTGGGTCAGATATAA  400

seq1  ATACAGAAAGACTAGAACCTCAGCATAGCACCTTTACTGACATTTCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAAGACTAGAACCTCAGCATAGCACCTTTACTGACATTTCATCT  450

seq1  CACTTAATTTTATAAATGAGGAAAATGTGAAGCTTGAGTTACACCCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAATTTTATAAATGAGGAAAATGTGAAGCTTGAGTTACACCCTTAA  500

seq1  AAATGGGTACATTATGGTGTGCGGTAGAGAGGTTGAGGATGTAGGGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTACATTATGGTGTGCGGTAGAGAGGTTGAGGATGTAGGGGCAG  550

seq1  GGAGCCCAGGGTAACTTCTGGGGTTGTCCCGGTGGTCCCAGGAGAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCAGGGTAACTTCTGGGGTTGTCCCGGTGGTCCCAGGAGAGATGG  600

seq1  AGTTCGTGACGGAGCAGCCGTTCGACCTGGACCCATGCTACATGCAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTGACGGAGCAGCCGTTCGACCTGGACCCATGCTACATGCAGCTG  650

seq1  CACTACATTGGCGAGGGAGCAGAAGGCATGATCTGCTCAGCTCATGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATTGGCGAGGGAGCAGAAGGCATGATCTGCTCAGCTCATGACCA  700

seq1  TGTGCACAAGACCAGAATGGCTATCAAGAAGATCAGCCGCTTCCTGTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACAAGACCAGAATGGCTATCAAGAAGATCAGCCGCTTCCTGTATC  750

seq1  AAATCTACTGTCAGAACACGCTGAGGCTGAGGGAAATCCAGAACTTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTACTGTCAGAACACGCTGAGGCTGAGGGAAATCCAGAACTTGCTG  800

seq1  AGATT-CCACCATGAGAATGTCATAGGCATGCGAGACATTCTCAGAGCAC  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCACCATGAGAATGTCATAGGCATGCGAGACATTCTCAGAGCAC  850

seq1  CCACCCTGGAAGGCATGAGGCAAGAAAGTTTACATTGGTCAGGACCTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGGAAGGCATGAGGCAAGAAAGTTTACATTGGTCAGGACCTCAT  900

seq1  GGAGACAGACTTGTACAAGCTGTTTAAGAACCACCAGTTGAGCAATGACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGACTTGTACAAGCTGTTTAAGAACCACCAGTTGAGCAATGACC  950

seq1  A-CATCTGCTA-TTTCCTCTACCAGAT-CCTAAGGG-CTTCAAGTACATA  995
      | ||||||||| ||||||||| ||||| |||||||| || || |||||||
seq2  ACCATCTGCTATTTTCCTCTA-CAGATCCCTAAGGGCCTCCAGGTACATA  999

seq1  CAC--TCAACACCAGGACCCGAACCCTCCAATCTGCTAGCCAA-CACACC  1042
      |||   |||||||| |||||||||||||| ||||||||||||| ||||||
seq2  CACCTCCAACACCA-GACCCGAACCCTCC-ATCTGCTAGCCAACCACACC  1047

seq1  --ACCTGAGACCTGTAAGAT-CTG-TGATTTTTA--GCATGACC  1080
         ||||||||||||||||| ||| |||||||||   |||||||
seq2  CACCCTGAGACCTGTAAGATCCTGTTGATTTTTAAGCCATGACC  1091