BAC Information

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BAC

Clone NameB6Ng01-293F09
Chromosome3 (Build37)
Map Location 7,632,649 - 7,633,745
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039349, Olfr289-ps1, EG667801, Pkia, LOC667807, 3110050N22Rik, Il7
Downstream geneLOC620822, LOC633072, LOC545500, LOC620966, Stmn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293F09.bB6Ng01-293F09.g
ACCGA089744GA089745
length1,2041,090
definitionB6Ng01-293F09.b B6Ng01-293F09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccagagttccaggttagttgactttgttgttcctcctgtgtggt
ttctatccccttcagggccttcaatccttccccctaactcttccatgaga
gtccacgacctccatccaatgtttggcgctgggcatttgcagcaattgca
gacagatgtcggatagggactctctgagaacaactatgctaggctcttat
ctgtaagcataacagaatacccttaataatgtcagggattgttgttttca
catgggatgggtttcaagttaggccatttattggttgacaattccttcag
tctgtgatccatatttgtttctgcatttcttttacacaagatacattttg
attcaaaggttttgtgaatggtttggcgacttcatcgtccttccactggc
aatcctgtctggcactgaagttccatgtgctcactattaggcgtcttggg
taaggtcacccacatttacttctgagatcctccccgattatgggtctctg
ggacttcttaatgatttcccccatcaccccatgcccagcagttgcagatt
ttcattcattccttggcactctttgtctttcttctgtgtctctgcacacc
tgatcctgtcctccattcccctctcctctcccatgctccctcaatctgct
ttttttttatgacttcctttgaatctgtgaatctttactttatgtctttt
ttttcatttttttccattttttattaggtatttagctcatttacatttcc
aatgctataccaaaagtcccccatatccacccacccccactcccctgccc
acccactccccctttttggccctggtgttcccctgtactggggcatataa
agtttgcaagtccaatgggccctctctttccagtgatggccgactaggcc
atctttttgatatatatgcagctagagtcaagagctccgggggtactggt
tagttcataatgttgtttccaccctattacggttgcagatccctttagct
ccttggctacttttctctagctcctccattgggagccctatgatccatcc
atagctgactggtgagcatcacttctgtgtttggctaagcccgcatagtt
tcacaagagatacgcttacatctgggttctccatattctgctatgtgtaa
tgccatgggtcaagttgatgctgatatgggtagtactcctgagaatgtgc
agtc

gaattcaacagcagtctggagactcaggcacagacttgttgcaggagaag
gcatagagctcatagtttataggatatttttctcacatttggtttcaatg
gctttgttttatgctttgttttgtatttggggaatggacttggagttaca
tccttgagcatacacatttcacctagggctttggagttgagcctgatgag
attgtgctaaagcatgagtcagaatcaggtgtaaagacactgacattgct
gtcaatactgactcagtagaagaccaacacaggccaatagaaataactga
catattacagctcattccttgttctgaagttacgaataccaagcaatact
atccatgctcctccaggtgggtccttgatggtcctggagagacatgcctt
gaggtaggactcatttgtaaggtctgcaagagactgacaagctacatgtg
ttctctggagtcagacacatggaactggagtccagaaagccttcaagttc
taatggacaaccactaattctgtaaaactcggtaagatagagggtaggaa
tcagccttttttaattttttatttttttaattgcaaatgatcatgacctg
tataaagagaaggcaatctagagcttgggctagtggtatatcctccctgg
catcattacgtgaatacatgatgctagcatacagtaatcctggcagggcc
ctaaagaaaacaagaccagattcagttaaatactgatatttcacttgatt
acatgaatctctccacagcacatattggggtagagaaaaatatggcagaa
atacaccatttggcttatactctcatcacagactaaaactcagaggttgc
agattaaaaccaccaatgaaatgaatcactagagtcttaggtggccaggc
tgatatttgggtagccttatctcttgattattttttttttgccaccatta
cttcctgctccattatctgggtattaaagaatgagagaatggtgaggtct
cctccactgcaaagctgggcaacaaggcaggttagggtggggacatgaga
agaaaatagatgtttgagagaagtcatcacagatgtctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7632649_7633745
seq2: B6Ng01-293F09.g_65_1154

seq1  GAATTCAACAGCAGTCTGGAGACTCAGGCACAGACTTGTTGCAGGAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGCAGTCTGGAGACTCAGGCACAGACTTGTTGCAGGAGAAG  50

seq1  GCATAGAGCTCATAGTTTATAGGATATTTTTCTCACATTTGGTTTCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAGCTCATAGTTTATAGGATATTTTTCTCACATTTGGTTTCAATG  100

seq1  GCTTTGTTTTATGCTTTGTTTTGTATTTGGGGAATGGACTTGGAGTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTTTATGCTTTGTTTTGTATTTGGGGAATGGACTTGGAGTTACA  150

seq1  TCCTTGAGCATACACATTTCACCTAGGGCTTTGGAGTTGAGCCTGATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGCATACACATTTCACCTAGGGCTTTGGAGTTGAGCCTGATGAG  200

seq1  ATTGTGCTAAAGCATGAGTCAGAATCAGGTGTAAAGACACTGACATTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCTAAAGCATGAGTCAGAATCAGGTGTAAAGACACTGACATTGCT  250

seq1  GTCAATACTGACTCAGTAGAAGACCAACACAGGCCAATAGAAATAACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATACTGACTCAGTAGAAGACCAACACAGGCCAATAGAAATAACTGA  300

seq1  CATATTACAGCTCATTCCTTGTTCTGAAGTTACGAATACCAAGCAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTACAGCTCATTCCTTGTTCTGAAGTTACGAATACCAAGCAATACT  350

seq1  ATCCATGCTCCTCCAGGTGGGTCCTTGATGGTCCTGGAGAGACATGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCTCCTCCAGGTGGGTCCTTGATGGTCCTGGAGAGACATGCCTT  400

seq1  GAGGTAGGACTCATTTGTAAGGTCTGCAAGAGACTGACAAGCTACATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGACTCATTTGTAAGGTCTGCAAGAGACTGACAAGCTACATGTG  450

seq1  TTCTCTGGAGTCAGACACATGGAACTGGAGTCCAGAAAGCCTTCAAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGAGTCAGACACATGGAACTGGAGTCCAGAAAGCCTTCAAGTTC  500

seq1  TAATGGACAACCACTAATTCTGTAAAACTCGGTAAGATAGAGGGTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGACAACCACTAATTCTGTAAAACTCGGTAAGATAGAGGGTAGGAA  550

seq1  TCAGCCTTTTTTAATTTTTTATTTTTTTAATTGCAAATGATCATGACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTTTTTAATTTTTTATTTTTTTAATTGCAAATGATCATGACCTG  600

seq1  TATAAAGAGAAGGCAATCTAGAGCTTGGGCTAGTGGTATATCCTCCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAGAAGGCAATCTAGAGCTTGGGCTAGTGGTATATCCTCCCTGG  650

seq1  CATCATTACGTGAATACATGATGCTAGCATACAGTAATCCTGGCAGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTACGTGAATACATGATGCTAGCATACAGTAATCCTGGCAGGGCC  700

seq1  CTAAAGAAAACAAGACCAGATTCAGTTAAATACTGATATTTCACTTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAAACAAGACCAGATTCAGTTAAATACTGATATTTCACTTGATT  750

seq1  ACATGAATCTCTCCACAGCACATATTGGGGTAGAGAAAAATATGGCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATCTCTCCACAGCACATATTGGGGTAGAGAAAAATATGGCAGAA  800

seq1  ATACACCATTTGGCTTATACTCTCATCACAGACTAAAACTCAGAGGTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCATTTGGCTTATACTCTCATCACAGACTAAAACTCAGAGGTTGC  850

seq1  AGATTAAAACCACCAATGAAATGAATCACTAGAGTCTTAGGTGGCCAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAACCACCAATGAAATGAATCACTAGAGTCTTAGGTGGCCAGGC  900

seq1  TGATATTT-GGTAGCCTTATCTCTTGATTATTTTTTTTTTTGCCACCATT  949
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TGATATTTGGGTAGCCTTATCTCTTGATTA-TTTTTTTTTTGCCACCATT  949

seq1  AC-TCCTGCTCCATTAATCTGGGTATTAAAGAATGAGAGGAATGGTGAGG  998
      || |||||||||||| |||||||||||||||||||||| |||||||||||
seq2  ACTTCCTGCTCCATT-ATCTGGGTATTAAAGAATGAGA-GAATGGTGAGG  997

seq1  TCTCCTCCACTGCAAAGCTGGGCAACAAAGGCAGGGTAGGGTTGGGGACA  1048
      |||||||||||||||||||||||||| |||||||| ||||| ||||||||
seq2  TCTCCTCCACTGCAAAGCTGGGCAAC-AAGGCAGGTTAGGG-TGGGGACA  1045

seq1  TGAGAAGAAAAATAGATGTTTGGAGAGAAGTCAATCCACAGATGTCTGC  1097
      ||||||| ||||||||||||| |||||||||||   |||||||||||||
seq2  TGAGAAG-AAAATAGATGTTT-GAGAGAAGTCA--TCACAGATGTCTGC  1090


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