BAC Information

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BAC

Clone NameB6Ng01-293L02
Chromosome3 (Build37)
Map Location 6,946,701 - 6,947,576
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
Downstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7, LOC620822
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293L02.bB6Ng01-293L02.g
ACCGA090010GA090011
length1,2281,039
definitionB6Ng01-293L02.b B6Ng01-293L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgaacctgccaatccatgagcatgggagatcgttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattggagaagggtgttgtttccctaatttcttttctcagcct
gtttattcttttgtgtagaggaaaggccattgacttgtttgagtttaatt
tttatattcagctactttcaccggaagcttgttttatcaggttaggagtt
acttcttggtggatttttaaggttccacttatatatattaccctattcca
ttatctatctggcaaaggtatctttgacctctctcttttccaatattgaa
tatctccctctggtatacactcctcagt
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggtttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttaattgtta
tagttgtctttatgaagagattgttcctctgttgattttgttaccctcaa
tcagcagtcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctctcctcttttggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctctgtggctctcgccaggaaggtggccggctgtctggagc
tgaagatggcgccacctcagaagctttgtggctctcgccaggaaggtggt
cagctgtctggagccgaagatggcgccgccccagaagctctgcgactctc
gcccgtaccagaaacggctggcctctgtattccacacggtctcccgtgca
gcctgccctctgcggagtcctggagccaagaaggttcccgccggcgcctg
tgacacaaacctctcaggccggcaaggtcatggtttttatccacgcttcc
cctacagaacagaattcattgacttgctagtcagtgaaattttaaaaacg
tattgtgtggaaaatattaaattttacaaaaatataaaatcaagaatcct
agaagtattttggatgcaaataaactattaattcataacagaaaatgggg
aaagaataagaaaattttcattaaaagttagagaagagacaacagacaag
catttggcaaatgactggctcgtcttcagaaggagagcacagattcttac
actgcagagcttgagctttcaacatctctaccagccatagaaaaagtctc
aaatcctacgattacatatgtgttgatgctcctccacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6946701_6947576
seq2: B6Ng01-293L02.g_239_1105

seq1  ATCTGGCAATCTCTGGAGTTAATTGTTATAGTTGTCTTTATGAAGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCAATCTCTGGAGTTAATTGTTATAGTTGTCTTTATGAAGAGATT  50

seq1  GTTCCTCTGTTGATTTTGTTACCCTCAATCAGCAGTCGTGGGAGACAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTGTTGATTTTGTTACCCTCAATCAGCAGTCGTGGGAGACAAGC  100

seq1  TCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGCAGGCAAGCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGCAGGCAAGCTCTC  150

seq1  CTCTTTTGGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGC  200

seq1  TGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTCTGTGGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTCTGTGGCTCTC  250

seq1  GCCAGGAAGGTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCACCTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAGGTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCACCTCAGAA  300

seq1  GCTTTGTGGCTCTCGCCAGGAAGGTGGTCAGCTGTCTGGAGCCGAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTGGCTCTCGCCAGGAAGGTGGTCAGCTGTCTGGAGCCGAAGATG  350

seq1  GCGCCGCCCCAGAAGCTCTGCGACTCTCGCCCGTACCAGAAACGGCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGCCCCAGAAGCTCTGCGACTCTCGCCCGTACCAGAAACGGCTGGC  400

seq1  CTCTGTATTCCACACGGTCTCCCGTGCAGCCTGCCCTCTGCGGAGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATTCCACACGGTCTCCCGTGCAGCCTGCCCTCTGCGGAGTCCTG  450

seq1  GAGCCAAGAAGGTTCCCGCCGGCGCCTGTGACACAAACCTCTCAGGCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGAAGGTTCCCGCCGGCGCCTGTGACACAAACCTCTCAGGCCGG  500

seq1  CAAGGTCATGGTTTTTATCCACGCTTCCCCTACAGAACAGAATTCATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCATGGTTTTTATCCACGCTTCCCCTACAGAACAGAATTCATTGA  550

seq1  CTTGCTAGTCAGTGAAATTTTAAAAACGTATTGTGTGGAAAATATTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGTCAGTGAAATTTTAAAAACGTATTGTGTGGAAAATATTAAAT  600

seq1  TTTACAAAAATATAAAATCAAGAATCCTAGAAGTATTTTGGATGCAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAAATATAAAATCAAGAATCCTAGAAGTATTTTGGATGCAAATA  650

seq1  AACTATTAATTCATAACAGAAAATGGGGAAAGAATAAGAAAATTTTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTAATTCATAACAGAAAATGGGGAAAGAATAAGAAAATTTTCATT  700

seq1  AAAAGTTAGAGAAGAGACAACAGACAAGGCATTTGGCAAATGACTGGCTC  750
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAAGTTAGAGAAGAGACAACAGACAA-GCATTTGGCAAATGACTGGCTC  749

seq1  GTCTTCAGAAGGAGAAGCACAGATTCTTACACTGCAGAGCTTGAGCTTTT  800
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  GTCTTCAGAAGGAG-AGCACAGATTCTTACACTGCAGAGCTTGAGC-TTT  797

seq1  CAACCATTCTCTACCAGCAATAGAAAAAGTCCTCAAAATCCTTACGATTA  850
      ||||   ||||||||||| ||||||||||| ||| |||||| ||||||||
seq2  CAAC--ATCTCTACCAGCCATAGAAAAAGT-CTC-AAATCC-TACGATTA  842

seq1  CATATGTGTTGATGCTCCTCACACAA  876
      |||||||||||||||||||| |||||
seq2  CATATGTGTTGATGCTCCTC-CACAA  867