BAC Information

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BAC

Clone NameB6Ng01-294B06
Chromosome3 (Build37)
Map Location 51,163,213 - 51,164,116
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a11, EG621304, LOC100039667, Ccrn4l, Elf2
Downstream geneA630062H14, 4930583H14Rik, LOC669130, Ndufc1, Narg1, Rab33b, Setd7, LOC100039684, Mgst2, Maml3, LOC433587, LOC100039788, LOC671890, Olfr1398-ps1, Foxo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294B06.bB6Ng01-294B06.g
ACCGA090299GA090300
length905406
definitionB6Ng01-294B06.b B6Ng01-294B06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccctttcagggcgggtttgaaatccgactctacttccagctca
gactgtcaggtcccgccccaagacgcctcaacggtcataaagtgaatcag
agagagtgccttacgtggctcgttggtctaggggtatgattctcgcttag
ggtgcgagaggtcccgggttcaaatcccggacgagcccaattttatctcc
catacaacgtaaacctgacctcagttgtattccggagatttaactggcaa
caaattatcttttaaaagaactaaaactctgctcttagaaagagttgagt
ctccagtcacaggtggttcagacttcggcctgcacttccaaccacagcgc
ttggctcaggaggctagagttttaacatttttgaaaattaaattatgttt
tattctattacttattgggggttggggcaacgccactggggagatcaaag
agcactttgaggaagtcagttttccttttccgcggtgtgcgcccctgggg
ctggaactcaggtggtcctcgcaaggagccagacttggtgaggggagcct
ggagcccgaagagggagtgccgtgttagaacgccagagtgggggactcca
tccagcccctcaagaagttttatttaggtttagttatagtgggaagaaca
ggctgggaaaagaccattggctgtcagtttatttttattttgctgctacc
agacatagaatctaggcgctcatgcacgccggtcaagcactgctatttat
ttatttattttaattacatttatctaatctatccatctgttatctaccta
tcaacctattcatctatctatctgtccacctattatctacctgtctatcc
ccccccccctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgta
ctacatcttcgagtaagacgctgcgggttcctaattggtaaattaagttg
ccagcagccaatgactgggcagggagacagaggtgagactctagatttct
ggggcaaggaaaccacgggaagaagtttttagaatctccatgccgggggg
aagcaggaggattagacttggcagctgcgggagagaaagcacacagtcat
atatgagcctgggaagagaggccccaggggcccctccccccattgggtct
agagcagcaaagatggaatagagattttagtaaataataattcaggagta
tcgaaggggaggcggtagcaacgtggaggtttggtagtgatccaactatt
gagctacttagtggatattacaaataaggccgtgtgtgtgtgtgtgtgtg
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_51163213_51164116
seq2: B6Ng01-294B06.b_49_953

seq1  GAATTCACCCTTTCAGGGCGGGTTTGAAATCCGACTCTACTTCCAGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTTTCAGGGCGGGTTTGAAATCCGACTCTACTTCCAGCTCA  50

seq1  GACTGTCAGGTCCCGCCCCAAGACGCCTCAACGGTCATAAAGTGAATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCAGGTCCCGCCCCAAGACGCCTCAACGGTCATAAAGTGAATCAG  100

seq1  AGAGAGTGCCTTACGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGCCTTACGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAG  150

seq1  GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCAATTTTATCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCAATTTTATCTCC  200

seq1  CATACAACGTAAACCTGACCTCAGTTGTATTCCGGAGATTTAACTGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACGTAAACCTGACCTCAGTTGTATTCCGGAGATTTAACTGGCAA  250

seq1  CAAATTATCTTTTAAAAGAACTAAAACTCTGCTCTTAGAAAGAGTTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATCTTTTAAAAGAACTAAAACTCTGCTCTTAGAAAGAGTTGAGT  300

seq1  CTCCAGTCACAGGTGGTTCAGACTTCGGCCTGCACTTCCAACCACAGCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCACAGGTGGTTCAGACTTCGGCCTGCACTTCCAACCACAGCGC  350

seq1  TTGGCTCAGGAGGCTAGAGTTTTAACATTTTTGAAAATTAAATTATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCAGGAGGCTAGAGTTTTAACATTTTTGAAAATTAAATTATGTTT  400

seq1  TATTCTATTACTTATTGGGGGTTGGGGCAACGCCACTGGGGAGATCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATTACTTATTGGGGGTTGGGGCAACGCCACTGGGGAGATCAAAG  450

seq1  AGCACTTTGAGGAAGTCAGTTTTCCTTTTCCGCGGTGTGCGCCCCTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTGAGGAAGTCAGTTTTCCTTTTCCGCGGTGTGCGCCCCTGGGG  500

seq1  CTGGAACTCAGGTGGTCCTCGCAAGGAGCCAGACTTGGTGAGGGGAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCAGGTGGTCCTCGCAAGGAGCCAGACTTGGTGAGGGGAGCCT  550

seq1  GGAGCCCGAAGAGGGAGTGCCGTGTTAGAACGCCAGAGTGGGGGACTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCGAAGAGGGAGTGCCGTGTTAGAACGCCAGAGTGGGGGACTCCA  600

seq1  TCCAGCCCCTCAAGAAGTTTTATTTAGGTTTAGTTATAGTGGGAAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCCTCAAGAAGTTTTATTTAGGTTTAGTTATAGTGGGAAGAACA  650

seq1  GGCTGGGAAAAGACCATTGGCTGTCAGTTTATTTTTATTTTGCTGCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGAAAAGACCATTGGCTGTCAGTTTATTTTTATTTTGCTGCTACC  700

seq1  AGACATAGAATCTAGGCGCTCATGCACGCCGGTCAAGCACTGCTATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGAATCTAGGCGCTCATGCACGCCGGTCAAGCACTGCTATTTAT  750

seq1  TTATTTATTTTAATTACATTTATCTAATCTATCCATCTGTTATCTACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTAATTACATTTATCTAATCTATCCATCTGTTATCTACCTA  800

seq1  TCAACCTATTCATCTATCTATCTGTCCACCTATTATCTACCTGTCTAT-C  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAACCTATTCATCTATCTATCTGTCCACCTATTATCTACCTGTCTATCC  850

seq1  CCCCCCCCCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGT  900

seq1  GTGTA  904
      |||||
seq2  GTGTA  905